RNA–Protein interactions for RNA: ENST00000600408.1

KCNN4-206, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 2

Gene KCNN4, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-206ENST00000600408 RIMBP3CA6NJZ7 1639 aa28.87■■■□□ 2.21
KCNN4-206ENST00000600408 RIMBP3BA6NNM3 1639 aa28.87■■■□□ 2.21
KCNN4-206ENST00000600408 RIMBP3Q9UFD9 1639 aa28.87■■■□□ 2.21
KCNN4-206ENST00000600408 SHROOM2Q13796 1616 aa28.83■■■□□ 2.21
KCNN4-206ENST00000600408 JPH4Q96JJ6 628 aa28.8■■■□□ 2.2
KCNN4-206ENST00000600408 IQGAP2Q13576 1575 aa28.77■■■□□ 2.2
KCNN4-206ENST00000600408 KIF21BO75037 1637 aa28.76■■■□□ 2.19
KCNN4-206ENST00000600408 PRG4Q92954 1404 aaPredicted RBP28.73■■■□□ 2.19
KCNN4-206ENST00000600408 CTTNBP2Q8WZ74 1663 aa28.72■■■□□ 2.19
KCNN4-206ENST00000600408 ARAP1Q96P48 1450 aa28.67■■■□□ 2.18
KCNN4-206ENST00000600408 CARMIL2Q6F5E8 1435 aa28.64■■■□□ 2.18
KCNN4-206ENST00000600408 ERCC6L2Q5T890 1561 aa28.63■■■□□ 2.17
KCNN4-206ENST00000600408 CYB5RLQ6IPT4 315 aa28.63■■■□□ 2.17
KCNN4-206ENST00000600408 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
KCNN4-206ENST00000600408 UGGT2Q9NYU1 1516 aa28.61■■■□□ 2.17
KCNN4-206ENST00000600408 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
KCNN4-206ENST00000600408 DISP1Q96F81 1524 aa28.5■■■□□ 2.15
KCNN4-206ENST00000600408 TNIKQ9UKE5 1360 aa28.49■■■□□ 2.15
KCNN4-206ENST00000600408 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
KCNN4-206ENST00000600408 KIAA0556O60303 1618 aa28.47■■■□□ 2.15
KCNN4-206ENST00000600408 PTPRGP23470 1445 aa28.43■■■□□ 2.14
KCNN4-206ENST00000600408 SAMD9Q5K651 1589 aa28.35■■■□□ 2.13
KCNN4-206ENST00000600408 TTBK1Q5TCY1 1321 aaPredicted RBP28.35■■■□□ 2.13
KCNN4-206ENST00000600408 EFCAB5A4FU69 1503 aa28.34■■■□□ 2.13
KCNN4-206ENST00000600408 RANGAP1P46060 587 aaPredicted RBP28.33■■■□□ 2.13
KCNN4-206ENST00000600408 P3H3Q8IVL6 736 aa28.26■■■□□ 2.11
KCNN4-206ENST00000600408 UACAQ9BZF9 1416 aa28.26■■■□□ 2.11
KCNN4-206ENST00000600408 NPM1P06748 294 aaKnown RBP eCLIP28.24■■■□□ 2.11
KCNN4-206ENST00000600408 ADCY10Q96PN6 1610 aa28.23■■■□□ 2.11
KCNN4-206ENST00000600408 UHRF1BP1LA0JNW5 1464 aa28.22■■■□□ 2.11
KCNN4-206ENST00000600408 ABCC2Q92887 1545 aa28.2■■■□□ 2.1
KCNN4-206ENST00000600408 FHOD3Q2V2M9 1422 aa28.18■■■□□ 2.1
KCNN4-206ENST00000600408 PLB1Q6P1J6 1458 aa28.15■■■□□ 2.1
KCNN4-206ENST00000600408 ARHGAP35Q9NRY4 1499 aa28.15■■■□□ 2.1
KCNN4-206ENST00000600408 ABCA8O94911 1581 aa28.13■■■□□ 2.09
KCNN4-206ENST00000600408 CLIP1P30622 1438 aa28.1■■■□□ 2.09
KCNN4-206ENST00000600408 FMN1Q68DA7 1419 aa28.09■■■□□ 2.09
KCNN4-206ENST00000600408 LOC105371045A0A1W2PR82 267 aa28.07■■■□□ 2.08
KCNN4-206ENST00000600408 MAPKBP1O60336 1514 aa28.07■■■□□ 2.08
KCNN4-206ENST00000600408 KDM5BQ9UGL1 1544 aa28.07■■■□□ 2.08
KCNN4-206ENST00000600408 RAPGEF6Q8TEU7 1601 aa28.05■■■□□ 2.08
KCNN4-206ENST00000600408 CEP162Q5TB80 1403 aa28.01■■■□□ 2.08
KCNN4-206ENST00000600408 TRHP20396 242 aaPredicted RBP28.01■■■□□ 2.07
KCNN4-206ENST00000600408 ZCCHC11Q5TAX3 1644 aaKnown RBP28■■■□□ 2.07
KCNN4-206ENST00000600408 ASXL2Q76L83 1435 aa27.93■■■□□ 2.06
KCNN4-206ENST00000600408 NUP153P49790 1475 aaKnown RBP27.93■■■□□ 2.06
KCNN4-206ENST00000600408 HECW1Q76N89 1606 aa27.9■■■□□ 2.06
KCNN4-206ENST00000600408 ATP10BO94823 1461 aa27.89■■■□□ 2.06
KCNN4-206ENST00000600408 ABCC10Q5T3U5 1492 aa27.89■■■□□ 2.06
KCNN4-206ENST00000600408 ARID3CA6NKF2 412 aa27.87■■■□□ 2.05
KCNN4-206ENST00000600408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.87■■■□□ 2.05
KCNN4-206ENST00000600408 HNRNPUL2Q1KMD3 747 aaKnown RBP27.87■■■□□ 2.05
KCNN4-206ENST00000600408 ATP1B4Q9UN42 357 aaPredicted RBP27.86■■■□□ 2.05
KCNN4-206ENST00000600408 WDR7Q9Y4E6 1490 aa27.86■■■□□ 2.05
KCNN4-206ENST00000600408 CASKIN1Q8WXD9 1431 aa27.84■■■□□ 2.05
KCNN4-206ENST00000600408 DIP2BQ9P265 1576 aa27.83■■■□□ 2.05
KCNN4-206ENST00000600408 FAM69CQ0P6D2 419 aa27.82■■■□□ 2.04
KCNN4-206ENST00000600408 FYCO1Q9BQS8 1478 aa27.82■■■□□ 2.04
KCNN4-206ENST00000600408 PCF11O94913 1555 aaKnown RBP27.81■■■□□ 2.04
KCNN4-206ENST00000600408 EPRSP07814 1512 aaKnown RBP27.78■■■□□ 2.04
KCNN4-206ENST00000600408 KIF13AQ9H1H9 1805 aa27.78■■■□□ 2.04
KCNN4-206ENST00000600408 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.04
KCNN4-206ENST00000600408 GLI2P10070 1586 aa27.76■■■□□ 2.03
KCNN4-206ENST00000600408 PLEKHD1A6NEE1 506 aa27.75■■■□□ 2.03
KCNN4-206ENST00000600408 CDK11AQ9UQ88 783 aaPredicted RBP27.75■■■□□ 2.03
KCNN4-206ENST00000600408 CDK13Q14004 1512 aaKnown RBP27.73■■■□□ 2.03
KCNN4-206ENST00000600408 KCNH8Q96L42 1107 aa27.7■■■□□ 2.02
KCNN4-206ENST00000600408 VPS8Q8N3P4 1428 aa27.68■■■□□ 2.02
KCNN4-206ENST00000600408 LRRIQ1Q96JM4 1722 aa27.62■■■□□ 2.01
KCNN4-206ENST00000600408 MAP3K4Q9Y6R4 1608 aa27.61■■■□□ 2.01
KCNN4-206ENST00000600408 CFAP43Q8NDM7 1665 aa27.6■■■□□ 2.01
KCNN4-206ENST00000600408 TROQ12816 1431 aaPredicted RBP27.58■■■□□ 2.01
KCNN4-206ENST00000600408 CD109Q6YHK3 1445 aa27.58■■■□□ 2
KCNN4-206ENST00000600408 ABCA9Q8IUA7 1624 aa27.56■■■□□ 2
KCNN4-206ENST00000600408 TEX14Q8IWB6 1497 aa27.56■■■□□ 2
KCNN4-206ENST00000600408 TSPOAP1O95153 1857 aa27.54■■■□□ 2
KCNN4-206ENST00000600408 KIF14Q15058 1648 aa27.53■■■□□ 2
KCNN4-206ENST00000600408 MAGI3Q5TCQ9 1506 aa27.51■■□□□ 1.99
KCNN4-206ENST00000600408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.48■■□□□ 1.99
KCNN4-206ENST00000600408 MTUS2Q5JR59 1369 aa27.48■■□□□ 1.99
KCNN4-206ENST00000600408 PPRC1Q5VV67 1664 aaKnown RBP27.46■■□□□ 1.99
KCNN4-206ENST00000600408 APLP2Q06481 763 aa27.46■■□□□ 1.99
KCNN4-206ENST00000600408 TIAM1Q13009 1591 aa27.44■■□□□ 1.98
KCNN4-206ENST00000600408 MAP3K1Q13233 1512 aa27.44■■□□□ 1.98
KCNN4-206ENST00000600408 TTC37Q6PGP7 1564 aa27.43■■□□□ 1.98
KCNN4-206ENST00000600408 EHBP1L1Q8N3D4 1523 aa27.42■■□□□ 1.98
KCNN4-206ENST00000600408 PHLDB1Q86UU1 1377 aa27.39■■□□□ 1.98
KCNN4-206ENST00000600408 NEO1Q92859 1461 aa27.37■■□□□ 1.97
KCNN4-206ENST00000600408 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
KCNN4-206ENST00000600408 PLCH2O75038 1416 aa27.36■■□□□ 1.97
KCNN4-206ENST00000600408 KDM6BO15054 1643 aa27.36■■□□□ 1.97
KCNN4-206ENST00000600408 MYO5CQ9NQX4 1742 aa27.36■■□□□ 1.97
KCNN4-206ENST00000600408 ARAP3Q8WWN8 1544 aa27.35■■□□□ 1.97
KCNN4-206ENST00000600408 FANCAO15360 1455 aa27.32■■□□□ 1.96
KCNN4-206ENST00000600408 LRRC9Q6ZRR7 1453 aa27.32■■□□□ 1.96
KCNN4-206ENST00000600408 SUPT6HQ7KZ85 1726 aaKnown RBP27.28■■□□□ 1.96
KCNN4-206ENST00000600408 ARHGAP5Q13017 1502 aa27.28■■□□□ 1.96
KCNN4-206ENST00000600408 EFCAB2Q5VUJ9 269 aa27.28■■□□□ 1.96
KCNN4-206ENST00000600408 CCNB3Q8WWL7 1395 aa27.27■■□□□ 1.96
KCNN4-206ENST00000600408 PREX2Q70Z35 1606 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms