RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 CTTNBP2Q8WZ74 1663 aa32.45■■■□□ 2.79
GRAMD1A-212ENST00000600231 TIAM1Q13009 1591 aa32.45■■■□□ 2.78
GRAMD1A-212ENST00000600231 MAP3K1Q13233 1512 aa32.44■■■□□ 2.78
GRAMD1A-212ENST00000600231 FHOD3Q2V2M9 1422 aa32.43■■■□□ 2.78
GRAMD1A-212ENST00000600231 EFCAB5A4FU69 1503 aa32.4■■■□□ 2.78
GRAMD1A-212ENST00000600231 MRC2Q9UBG0 1479 aa32.39■■■□□ 2.78
GRAMD1A-212ENST00000600231 PCF11O94913 1555 aaKnown RBP32.36■■■□□ 2.77
GRAMD1A-212ENST00000600231 CCNB3Q8WWL7 1395 aa32.35■■■□□ 2.77
GRAMD1A-212ENST00000600231 LRRC9Q6ZRR7 1453 aa32.33■■■□□ 2.77
GRAMD1A-212ENST00000600231 ATP1B4Q9UN42 357 aaPredicted RBP32.32■■■□□ 2.76
GRAMD1A-212ENST00000600231 AQRO60306 1485 aaKnown RBP eCLIP32.27■■■□□ 2.769e-7■■■■■ 49.5
GRAMD1A-212ENST00000600231 FYCO1Q9BQS8 1478 aa32.25■■■□□ 2.75
GRAMD1A-212ENST00000600231 CASKIN1Q8WXD9 1431 aa32.24■■■□□ 2.75
GRAMD1A-212ENST00000600231 CFAP43Q8NDM7 1665 aa32.24■■■□□ 2.75
GRAMD1A-212ENST00000600231 PBRM1Q86U86 1689 aa32.21■■■□□ 2.75
GRAMD1A-212ENST00000600231 FMN1Q68DA7 1419 aa32.2■■■□□ 2.75
GRAMD1A-212ENST00000600231 PHLDB1Q86UU1 1377 aa32.18■■■□□ 2.74
GRAMD1A-212ENST00000600231 SAMD9Q5K651 1589 aa32.18■■■□□ 2.74
GRAMD1A-212ENST00000600231 ITGAEP38570 1179 aa32.17■■■□□ 2.74
GRAMD1A-212ENST00000600231 WDR62O43379 1518 aa32.15■■■□□ 2.74
GRAMD1A-212ENST00000600231 DHX57Q6P158 1386 aaKnown RBP32.13■■■□□ 2.73
GRAMD1A-212ENST00000600231 SNAPC4Q5SXM2 1469 aa32.13■■■□□ 2.73
GRAMD1A-212ENST00000600231 IFT140Q96RY7 1462 aa32.12■■■□□ 2.73
GRAMD1A-212ENST00000600231 GRIN2BQ13224 1484 aa32.11■■■□□ 2.73
GRAMD1A-212ENST00000600231 ZNF608Q9ULD9 1512 aaPredicted RBP32.1■■■□□ 2.73
GRAMD1A-212ENST00000600231 ADAMTS12P58397 1594 aa32.09■■■□□ 2.73
GRAMD1A-212ENST00000600231 CLSPNQ9HAW4 1339 aa32.05■■■□□ 2.72
GRAMD1A-212ENST00000600231 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
GRAMD1A-212ENST00000600231 DIEXFQ68CQ4 756 aaKnown RBP32.01■■■□□ 2.71
GRAMD1A-212ENST00000600231 FAM50AQ14320 339 aaKnown RBP32■■■□□ 2.71
GRAMD1A-212ENST00000600231 ZNF316A6NFI3 1004 aaPredicted RBP31.99■■■□□ 2.71
GRAMD1A-212ENST00000600231 IQGAP2Q13576 1575 aa31.97■■■□□ 2.71
GRAMD1A-212ENST00000600231 LRRIQ1Q96JM4 1722 aa31.94■■■□□ 2.7
GRAMD1A-212ENST00000600231 MTUS2Q5JR59 1369 aa31.93■■■□□ 2.7
GRAMD1A-212ENST00000600231 RAB3GAP2Q9H2M9 1393 aa31.92■■■□□ 2.7
GRAMD1A-212ENST00000600231 THOC2Q8NI27 1593 aaKnown RBP31.88■■■□□ 2.69
GRAMD1A-212ENST00000600231 EIF4G3O43432 1585 aaKnown RBP31.87■■■□□ 2.69
GRAMD1A-212ENST00000600231 SETD5Q9C0A6 1442 aa31.86■■■□□ 2.69
GRAMD1A-212ENST00000600231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.83■■■□□ 2.692e-9■■■□□ 17.1
GRAMD1A-212ENST00000600231 FGD6Q6ZV73 1430 aa31.81■■■□□ 2.68
GRAMD1A-212ENST00000600231 UGGT2Q9NYU1 1516 aa31.79■■■□□ 2.68
GRAMD1A-212ENST00000600231 KIAA0586Q9BVV6 1533 aa31.77■■■□□ 2.68
GRAMD1A-212ENST00000600231 GRIN2AQ12879 1464 aa31.76■■■□□ 2.68
GRAMD1A-212ENST00000600231 NCOA2Q15596 1464 aa31.76■■■□□ 2.68
GRAMD1A-212ENST00000600231 CCDC18Q5T9S5 1454 aa31.74■■■□□ 2.67
GRAMD1A-212ENST00000600231 EHBP1L1Q8N3D4 1523 aa31.73■■■□□ 2.67
GRAMD1A-212ENST00000600231 HECW1Q76N89 1606 aa31.72■■■□□ 2.67
GRAMD1A-212ENST00000600231 MAGI3Q5TCQ9 1506 aa31.71■■■□□ 2.67
GRAMD1A-212ENST00000600231 SUPT6HQ7KZ85 1726 aaKnown RBP31.71■■■□□ 2.67
GRAMD1A-212ENST00000600231 MYOM3Q5VTT5 1437 aa31.69■■■□□ 2.66
GRAMD1A-212ENST00000600231 MAGI1Q96QZ7 1491 aaPredicted RBP31.69■■■□□ 2.66
GRAMD1A-212ENST00000600231 MAPKBP1O60336 1514 aa31.68■■■□□ 2.66
GRAMD1A-212ENST00000600231 EPRSP07814 1512 aaKnown RBP31.68■■■□□ 2.66
GRAMD1A-212ENST00000600231 DISP1Q96F81 1524 aa31.66■■■□□ 2.66
GRAMD1A-212ENST00000600231 CHMP7Q8WUX9 453 aaPredicted RBP31.66■■■□□ 2.66
GRAMD1A-212ENST00000600231 KIAA0556O60303 1618 aa31.63■■■□□ 2.65
GRAMD1A-212ENST00000600231 ARHGEF11O15085 1522 aa31.62■■■□□ 2.65
GRAMD1A-212ENST00000600231 CDK13Q14004 1512 aaKnown RBP31.62■■■□□ 2.65
GRAMD1A-212ENST00000600231 ARID3CA6NKF2 412 aa31.62■■■□□ 2.65
GRAMD1A-212ENST00000600231 SYNJ2O15056 1496 aa31.61■■■□□ 2.65
GRAMD1A-212ENST00000600231 PTPRKQ15262 1439 aa31.59■■■□□ 2.65
GRAMD1A-212ENST00000600231 FBLN2P98095 1184 aa31.59■■■□□ 2.65
GRAMD1A-212ENST00000600231 CEP170Q5SW79 1584 aa31.55■■■□□ 2.64
GRAMD1A-212ENST00000600231 PTPN23Q9H3S7 1636 aa31.53■■■□□ 2.64
GRAMD1A-212ENST00000600231 HFM1A2PYH4 1435 aa31.49■■■□□ 2.63
GRAMD1A-212ENST00000600231 SIN3AQ96ST3 1273 aa31.46■■■□□ 2.63
GRAMD1A-212ENST00000600231 NUP153P49790 1475 aaKnown RBP31.46■■■□□ 2.63
GRAMD1A-212ENST00000600231 NUP160Q12769 1436 aa31.45■■■□□ 2.62
GRAMD1A-212ENST00000600231 RAPGEF6Q8TEU7 1601 aa31.43■■■□□ 2.62
GRAMD1A-212ENST00000600231 TCOF1Q13428 1488 aaKnown RBP31.43■■■□□ 2.62
GRAMD1A-212ENST00000600231 NAIPQ13075 1403 aa31.41■■■□□ 2.62
GRAMD1A-212ENST00000600231 JPH4Q96JJ6 628 aa31.41■■■□□ 2.62
GRAMD1A-212ENST00000600231 MIER1Q8N108 512 aa31.41■■■□□ 2.62
GRAMD1A-212ENST00000600231 NEUROD1Q13562 356 aa31.4■■■□□ 2.62
GRAMD1A-212ENST00000600231 MIA2Q96PC5 1412 aa31.37■■■□□ 2.61
GRAMD1A-212ENST00000600231 CARMIL2Q6F5E8 1435 aa31.33■■■□□ 2.61
GRAMD1A-212ENST00000600231 PLB1Q6P1J6 1458 aa31.33■■■□□ 2.61
GRAMD1A-212ENST00000600231 UACAQ9BZF9 1416 aa31.33■■■□□ 2.61
GRAMD1A-212ENST00000600231 CHIC2Q9UKJ5 165 aa31.33■■■□□ 2.61
GRAMD1A-212ENST00000600231 CDK11AQ9UQ88 783 aaPredicted RBP31.32■■■□□ 2.6
GRAMD1A-212ENST00000600231 RRP7BPQ9NSQ0 103 aa31.31■■■□□ 2.6
GRAMD1A-212ENST00000600231 TIMELESSQ9UNS1 1208 aa31.27■■■□□ 2.6
GRAMD1A-212ENST00000600231 ACIN1Q9UKV3 1341 aaKnown RBP31.25■■■□□ 2.59
GRAMD1A-212ENST00000600231 SCAF1Q9H7N4 1312 aaKnown RBP31.23■■■□□ 2.59
GRAMD1A-212ENST00000600231 PRG4Q92954 1404 aaPredicted RBP31.23■■■□□ 2.59
GRAMD1A-212ENST00000600231 CENPBP07199 599 aaPredicted RBP31.21■■■□□ 2.59
GRAMD1A-212ENST00000600231 TROQ12816 1431 aaPredicted RBP31.21■■■□□ 2.59
GRAMD1A-212ENST00000600231 AKNAQ7Z591 1439 aa31.19■■■□□ 2.58
GRAMD1A-212ENST00000600231 GCC2Q8IWJ2 1684 aa31.18■■■□□ 2.58
GRAMD1A-212ENST00000600231 ZNF644Q9H582 1327 aaPredicted RBP31.18■■■□□ 2.58
GRAMD1A-212ENST00000600231 PPP1R15AO75807 674 aaPredicted RBP31.15■■■□□ 2.58
GRAMD1A-212ENST00000600231 DAPK1P53355 1430 aa31.12■■■□□ 2.57
GRAMD1A-212ENST00000600231 KDM6BO15054 1643 aa31.11■■■□□ 2.57
GRAMD1A-212ENST00000600231 YTHDC1Q96MU7 727 aaKnown RBP31.11■■■□□ 2.57
GRAMD1A-212ENST00000600231 ABCC5O15440 1437 aa31.1■■■□□ 2.57
GRAMD1A-212ENST00000600231 ABCA8O94911 1581 aa31.1■■■□□ 2.57
GRAMD1A-212ENST00000600231 TRIM52Q96A61 297 aa31.08■■■□□ 2.57
GRAMD1A-212ENST00000600231 TONSLQ96HA7 1378 aa31.08■■■□□ 2.57
GRAMD1A-212ENST00000600231 DNMT1P26358 1616 aaKnown RBP31.07■■■□□ 2.56
GRAMD1A-212ENST00000600231 KIF14Q15058 1648 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms