RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 TRHP20396 242 aaPredicted RBP24.48■■□□□ 1.51
IRF3-224ENST00000599680 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
IRF3-224ENST00000599680 JPH4Q96JJ6 628 aa24.45■■□□□ 1.5
IRF3-224ENST00000599680 KIAA0586Q9BVV6 1533 aa24.44■■□□□ 1.5
IRF3-224ENST00000599680 IQGAP2Q13576 1575 aa24.33■■□□□ 1.49
IRF3-224ENST00000599680 RAPGEF2Q9Y4G8 1499 aa24.32■■□□□ 1.48
IRF3-224ENST00000599680 CTTNBP2Q8WZ74 1663 aa24.27■■□□□ 1.48
IRF3-224ENST00000599680 CARMIL2Q6F5E8 1435 aa24.24■■□□□ 1.47
IRF3-224ENST00000599680 ADCY10Q96PN6 1610 aa24.2■■□□□ 1.46
IRF3-224ENST00000599680 NPM1P06748 294 aaKnown RBP eCLIP24.17■■□□□ 1.46
IRF3-224ENST00000599680 KIF13AQ9H1H9 1805 aa24.17■■□□□ 1.46
IRF3-224ENST00000599680 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
IRF3-224ENST00000599680 PTPRGP23470 1445 aa24.14■■□□□ 1.45
IRF3-224ENST00000599680 UGGT2Q9NYU1 1516 aa24.13■■□□□ 1.45
IRF3-224ENST00000599680 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
IRF3-224ENST00000599680 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
IRF3-224ENST00000599680 KIAA0556O60303 1618 aa24.1■■□□□ 1.45
IRF3-224ENST00000599680 DISP1Q96F81 1524 aa24.1■■□□□ 1.45
IRF3-224ENST00000599680 MAPKBP1O60336 1514 aa24.08■■□□□ 1.45
IRF3-224ENST00000599680 EEA1Q15075 1411 aa24.04■■□□□ 1.44
IRF3-224ENST00000599680 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
IRF3-224ENST00000599680 GOLGA3Q08378 1498 aa24.01■■□□□ 1.43
IRF3-224ENST00000599680 DIP2BQ9P265 1576 aa23.99■■□□□ 1.43
IRF3-224ENST00000599680 ABCC2Q92887 1545 aa23.99■■□□□ 1.43
IRF3-224ENST00000599680 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
IRF3-224ENST00000599680 UACAQ9BZF9 1416 aa23.97■■□□□ 1.43
IRF3-224ENST00000599680 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
IRF3-224ENST00000599680 TSPOAP1O95153 1857 aa23.94■■□□□ 1.42
IRF3-224ENST00000599680 FAM69CQ0P6D2 419 aa23.94■■□□□ 1.42
IRF3-224ENST00000599680 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
IRF3-224ENST00000599680 ZCCHC11Q5TAX3 1644 aaKnown RBP23.91■■□□□ 1.42
IRF3-224ENST00000599680 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
IRF3-224ENST00000599680 KIF21BO75037 1637 aa23.87■■□□□ 1.41
IRF3-224ENST00000599680 PLB1Q6P1J6 1458 aa23.86■■□□□ 1.41
IRF3-224ENST00000599680 ASXL2Q76L83 1435 aa23.85■■□□□ 1.41
IRF3-224ENST00000599680 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
IRF3-224ENST00000599680 SAMD9Q5K651 1589 aa23.82■■□□□ 1.4
IRF3-224ENST00000599680 ABCA8O94911 1581 aa23.81■■□□□ 1.4
IRF3-224ENST00000599680 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
IRF3-224ENST00000599680 GLI2P10070 1586 aa23.78■■□□□ 1.4
IRF3-224ENST00000599680 KDM6BO15054 1643 aa23.74■■□□□ 1.39
IRF3-224ENST00000599680 RANGAP1P46060 587 aaPredicted RBP23.74■■□□□ 1.39
IRF3-224ENST00000599680 EPRSP07814 1512 aaKnown RBP23.71■■□□□ 1.39
IRF3-224ENST00000599680 PPRC1Q5VV67 1664 aaKnown RBP23.7■■□□□ 1.39
IRF3-224ENST00000599680 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.39
IRF3-224ENST00000599680 WDR7Q9Y4E6 1490 aa23.7■■□□□ 1.38
IRF3-224ENST00000599680 RAPGEF6Q8TEU7 1601 aa23.7■■□□□ 1.38
IRF3-224ENST00000599680 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
IRF3-224ENST00000599680 EFCAB5A4FU69 1503 aa23.67■■□□□ 1.38
IRF3-224ENST00000599680 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
IRF3-224ENST00000599680 CFAP43Q8NDM7 1665 aa23.64■■□□□ 1.37
IRF3-224ENST00000599680 FHOD3Q2V2M9 1422 aa23.63■■□□□ 1.37
IRF3-224ENST00000599680 ARID3CA6NKF2 412 aa23.6■■□□□ 1.37
IRF3-224ENST00000599680 TEX14Q8IWB6 1497 aa23.6■■□□□ 1.37
IRF3-224ENST00000599680 KCNH8Q96L42 1107 aa23.58■■□□□ 1.37
IRF3-224ENST00000599680 ATP10BO94823 1461 aa23.57■■□□□ 1.36
IRF3-224ENST00000599680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.54■■□□□ 1.36
IRF3-224ENST00000599680 HNRNPUL2Q1KMD3 747 aaKnown RBP23.54■■□□□ 1.36
IRF3-224ENST00000599680 NUP153P49790 1475 aaKnown RBP23.51■■□□□ 1.35
IRF3-224ENST00000599680 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
IRF3-224ENST00000599680 CD109Q6YHK3 1445 aa23.5■■□□□ 1.35
IRF3-224ENST00000599680 ABCA9Q8IUA7 1624 aa23.47■■□□□ 1.35
IRF3-224ENST00000599680 MAGI3Q5TCQ9 1506 aa23.46■■□□□ 1.35
IRF3-224ENST00000599680 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
IRF3-224ENST00000599680 HECW1Q76N89 1606 aa23.43■■□□□ 1.34
IRF3-224ENST00000599680 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
IRF3-224ENST00000599680 COL17A1Q9UMD9 1497 aaPredicted RBP23.37■■□□□ 1.33
IRF3-224ENST00000599680 PLEKHD1A6NEE1 506 aa23.37■■□□□ 1.33
IRF3-224ENST00000599680 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
IRF3-224ENST00000599680 CDK13Q14004 1512 aaKnown RBP23.36■■□□□ 1.33
IRF3-224ENST00000599680 LRRIQ1Q96JM4 1722 aa23.3■■□□□ 1.32
IRF3-224ENST00000599680 CFAP74Q9C0B2 1584 aa23.29■■□□□ 1.32
IRF3-224ENST00000599680 ARAP3Q8WWN8 1544 aa23.28■■□□□ 1.32
IRF3-224ENST00000599680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.27■■□□□ 1.32
IRF3-224ENST00000599680 TTC37Q6PGP7 1564 aa23.27■■□□□ 1.32
IRF3-224ENST00000599680 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.31
IRF3-224ENST00000599680 NEO1Q92859 1461 aa23.26■■□□□ 1.31
IRF3-224ENST00000599680 PCF11O94913 1555 aaKnown RBP23.25■■□□□ 1.31
IRF3-224ENST00000599680 MYO5CQ9NQX4 1742 aa23.23■■□□□ 1.31
IRF3-224ENST00000599680 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
IRF3-224ENST00000599680 CLIP1P30622 1438 aa23.23■■□□□ 1.31
IRF3-224ENST00000599680 KIF14Q15058 1648 aa23.21■■□□□ 1.31
IRF3-224ENST00000599680 ADGRL1O94910 1474 aa23.18■■□□□ 1.3
IRF3-224ENST00000599680 CCDC18Q5T9S5 1454 aa23.18■■□□□ 1.3
IRF3-224ENST00000599680 CASKIN1Q8WXD9 1431 aa23.18■■□□□ 1.3
IRF3-224ENST00000599680 FANCAO15360 1455 aa23.17■■□□□ 1.3
IRF3-224ENST00000599680 KDM4FA0A1W2PPD8 638 aa23.17■■□□□ 1.3
IRF3-224ENST00000599680 FYCO1Q9BQS8 1478 aa23.15■■□□□ 1.3
IRF3-224ENST00000599680 RICTORQ6R327 1708 aa23.14■■□□□ 1.3
IRF3-224ENST00000599680 FRMPD1Q5SYB0 1578 aa23.14■■□□□ 1.29
IRF3-224ENST00000599680 TROQ12816 1431 aaPredicted RBP23.13■■□□□ 1.29
IRF3-224ENST00000599680 AKNAQ7Z591 1439 aa23.13■■□□□ 1.29
IRF3-224ENST00000599680 RAPGEF3O95398 923 aa23.11■■□□□ 1.29
IRF3-224ENST00000599680 DENND4BO75064 1496 aaPredicted RBP23.11■■□□□ 1.29
IRF3-224ENST00000599680 PLCH2O75038 1416 aa23.08■■□□□ 1.29
IRF3-224ENST00000599680 CDC42BPBQ9Y5S2 1711 aa23.05■■□□□ 1.28
IRF3-224ENST00000599680 ARHGAP5Q13017 1502 aa23.04■■□□□ 1.28
IRF3-224ENST00000599680 CEP162Q5TB80 1403 aa23.04■■□□□ 1.28
IRF3-224ENST00000599680 ARHGEF40Q8TER5 1519 aa23.03■■□□□ 1.28
IRF3-224ENST00000599680 PREX2Q70Z35 1606 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms