RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
GRAMD1A-211ENST00000599564 SETD5Q9C0A6 1442 aa23.51■■□□□ 1.35
GRAMD1A-211ENST00000599564 FAM50AQ14320 339 aaKnown RBP23.51■■□□□ 1.35
GRAMD1A-211ENST00000599564 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
GRAMD1A-211ENST00000599564 HNRNPUQ00839 825 aaKnown RBP eCLIP23.49■■□□□ 1.35
GRAMD1A-211ENST00000599564 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
GRAMD1A-211ENST00000599564 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
GRAMD1A-211ENST00000599564 ARHGAP35Q9NRY4 1499 aa23.45■■□□□ 1.34
GRAMD1A-211ENST00000599564 DEKP35659 375 aaKnown RBP23.4■■□□□ 1.34
GRAMD1A-211ENST00000599564 PEG3Q9GZU2 1588 aa23.39■■□□□ 1.34
GRAMD1A-211ENST00000599564 PHLDB1Q86UU1 1377 aa23.36■■□□□ 1.33
GRAMD1A-211ENST00000599564 ATAD2BQ9ULI0 1458 aa23.35■■□□□ 1.33
GRAMD1A-211ENST00000599564 ATP1B4Q9UN42 357 aaPredicted RBP23.32■■□□□ 1.32
GRAMD1A-211ENST00000599564 PRKCSHP14314 528 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-211ENST00000599564 NBR1Q14596 966 aa23.31■■□□□ 1.32
GRAMD1A-211ENST00000599564 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
GRAMD1A-211ENST00000599564 B4GALNT3Q6L9W6 998 aa23.29■■□□□ 1.32
GRAMD1A-211ENST00000599564 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
GRAMD1A-211ENST00000599564 TIMELESSQ9UNS1 1208 aa23.28■■□□□ 1.32
GRAMD1A-211ENST00000599564 TIAM1Q13009 1591 aa23.27■■□□□ 1.32
GRAMD1A-211ENST00000599564 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
GRAMD1A-211ENST00000599564 PPP4R2Q9NY27 417 aa23.24■■□□□ 1.31
GRAMD1A-211ENST00000599564 P3H3Q8IVL6 736 aa23.23■■□□□ 1.31
GRAMD1A-211ENST00000599564 LRRC9Q6ZRR7 1453 aa23.23■■□□□ 1.31
GRAMD1A-211ENST00000599564 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
GRAMD1A-211ENST00000599564 CUX1P39880 1505 aa23.2■■□□□ 1.3
GRAMD1A-211ENST00000599564 PAK3O75914 559 aaPredicted RBP23.19■■□□□ 1.3
GRAMD1A-211ENST00000599564 MYT1LQ9UL68 1186 aa23.17■■□□□ 1.3
GRAMD1A-211ENST00000599564 NOP58Q9Y2X3 529 aaKnown RBP23.15■■□□□ 1.3
GRAMD1A-211ENST00000599564 FAM9BQ8IZU0 186 aa23.14■■□□□ 1.29
GRAMD1A-211ENST00000599564 ANO8Q9HCE9 1232 aaPredicted RBP23.1■■□□□ 1.29
GRAMD1A-211ENST00000599564 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
GRAMD1A-211ENST00000599564 ERICH6BQ5W0A0 696 aa23.07■■□□□ 1.28
GRAMD1A-211ENST00000599564 MAP3K1Q13233 1512 aa23.07■■□□□ 1.28
GRAMD1A-211ENST00000599564 HSPA5P11021 654 aaKnown RBP23.05■■□□□ 1.28
GRAMD1A-211ENST00000599564 IGF1RP08069 1367 aa23.01■■□□□ 1.27
GRAMD1A-211ENST00000599564 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
GRAMD1A-211ENST00000599564 MRS2Q9HD23 443 aa23■■□□□ 1.27
GRAMD1A-211ENST00000599564 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
GRAMD1A-211ENST00000599564 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
GRAMD1A-211ENST00000599564 SENP3-EIF4A1A0A087X0R7 540 aa22.96■■□□□ 1.27
GRAMD1A-211ENST00000599564 CNGB1Q14028 1251 aaPredicted RBP22.96■■□□□ 1.27
GRAMD1A-211ENST00000599564 CARMIL1Q5VZK9 1371 aa22.95■■□□□ 1.26
GRAMD1A-211ENST00000599564 SALL2Q9Y467 1007 aaPredicted RBP22.94■■□□□ 1.26
GRAMD1A-211ENST00000599564 FHOD3Q2V2M9 1422 aa22.93■■□□□ 1.26
GRAMD1A-211ENST00000599564 CFAP43Q8NDM7 1665 aa22.93■■□□□ 1.26
GRAMD1A-211ENST00000599564 PTPRKQ15262 1439 aa22.92■■□□□ 1.26
GRAMD1A-211ENST00000599564 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
GRAMD1A-211ENST00000599564 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.269e-7■■■■■ 49.5
GRAMD1A-211ENST00000599564 PRKRIP1Q9H875 184 aaPredicted RBP22.92■■□□□ 1.26
GRAMD1A-211ENST00000599564 UACAQ9BZF9 1416 aa22.92■■□□□ 1.26
GRAMD1A-211ENST00000599564 RTL5Q5HYW3 569 aaPredicted RBP22.91■■□□□ 1.26
GRAMD1A-211ENST00000599564 RTN4Q9NQC3 1192 aaKnown RBP22.91■■□□□ 1.26
GRAMD1A-211ENST00000599564 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
GRAMD1A-211ENST00000599564 KDM5BQ9UGL1 1544 aa22.9■■□□□ 1.26
GRAMD1A-211ENST00000599564 ANP32AP39687 249 aaKnown RBP22.9■■□□□ 1.26
GRAMD1A-211ENST00000599564 IL27Q8NEV9 243 aa22.9■■□□□ 1.26
GRAMD1A-211ENST00000599564 EIF4G2P78344 907 aaKnown RBP eCLIP22.89■■□□□ 1.251e-6■■■■■ 33.8
GRAMD1A-211ENST00000599564 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
GRAMD1A-211ENST00000599564 IPO9Q96P70 1041 aaKnown RBP22.88■■□□□ 1.25
GRAMD1A-211ENST00000599564 CNTLNQ9NXG0 1405 aa22.88■■□□□ 1.25
GRAMD1A-211ENST00000599564 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
GRAMD1A-211ENST00000599564 ZBTB47Q9UFB7 747 aaPredicted RBP22.86■■□□□ 1.25
GRAMD1A-211ENST00000599564 CCDC136Q96JN2 1154 aa22.86■■□□□ 1.25
GRAMD1A-211ENST00000599564 HFM1A2PYH4 1435 aa22.83■■□□□ 1.25
GRAMD1A-211ENST00000599564 PTPN23Q9H3S7 1636 aa22.83■■□□□ 1.24
GRAMD1A-211ENST00000599564 RRP7BPQ9NSQ0 103 aa22.81■■□□□ 1.24
GRAMD1A-211ENST00000599564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.81■■□□□ 1.242e-9■■■□□ 17.1
GRAMD1A-211ENST00000599564 CHIC2Q9UKJ5 165 aa22.81■■□□□ 1.24
GRAMD1A-211ENST00000599564 NAIPQ13075 1403 aa22.8■■□□□ 1.24
GRAMD1A-211ENST00000599564 NPM2Q86SE8 214 aaKnown RBP22.8■■□□□ 1.24
GRAMD1A-211ENST00000599564 NCOA2Q15596 1464 aa22.8■■□□□ 1.24
GRAMD1A-211ENST00000599564 CCDC7Q96M83 1385 aa22.77■■□□□ 1.24
GRAMD1A-211ENST00000599564 FOXD1Q16676 465 aa22.77■■□□□ 1.24
GRAMD1A-211ENST00000599564 MTUS2Q5JR59 1369 aa22.76■■□□□ 1.23
GRAMD1A-211ENST00000599564 CFTRP13569 1480 aa22.75■■□□□ 1.23
GRAMD1A-211ENST00000599564 L3MBTL2Q969R5 705 aa22.74■■□□□ 1.23
GRAMD1A-211ENST00000599564 FYCO1Q9BQS8 1478 aa22.74■■□□□ 1.23
GRAMD1A-211ENST00000599564 LAS1LQ9Y4W2 734 aaKnown RBP22.73■■□□□ 1.23
GRAMD1A-211ENST00000599564 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.73■■□□□ 1.23
GRAMD1A-211ENST00000599564 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
GRAMD1A-211ENST00000599564 CASKIN1Q8WXD9 1431 aa22.72■■□□□ 1.23
GRAMD1A-211ENST00000599564 FMN1Q68DA7 1419 aa22.71■■□□□ 1.23
GRAMD1A-211ENST00000599564 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
GRAMD1A-211ENST00000599564 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
GRAMD1A-211ENST00000599564 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.22
GRAMD1A-211ENST00000599564 NCOA1Q15788 1441 aa22.69■■□□□ 1.22
GRAMD1A-211ENST00000599564 NUDCQ9Y266 331 aa22.69■■□□□ 1.22
GRAMD1A-211ENST00000599564 KIF7Q2M1P5 1343 aa22.67■■□□□ 1.22
GRAMD1A-211ENST00000599564 SMG6Q86US8 1419 aaKnown RBP22.67■■□□□ 1.22
GRAMD1A-211ENST00000599564 DENND4BO75064 1496 aaPredicted RBP22.65■■□□□ 1.22
GRAMD1A-211ENST00000599564 NBPF8Q3BBV2 869 aa22.65■■□□□ 1.22
GRAMD1A-211ENST00000599564 NEFMP07197 916 aa22.64■■□□□ 1.22
GRAMD1A-211ENST00000599564 MPHOSPH9Q99550 1183 aa22.6■■□□□ 1.21
GRAMD1A-211ENST00000599564 MYOM3Q5VTT5 1437 aa22.6■■□□□ 1.21
GRAMD1A-211ENST00000599564 RNF123Q5XPI4 1314 aa22.59■■□□□ 1.21
GRAMD1A-211ENST00000599564 KDM6BO15054 1643 aa22.56■■□□□ 1.2
GRAMD1A-211ENST00000599564 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
GRAMD1A-211ENST00000599564 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
GRAMD1A-211ENST00000599564 EXOC6Q8TAG9 804 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms