RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 JPH4Q96JJ6 628 aa38.46■■■■□ 3.75
CCDC9-204ENST00000599398 PRG4Q92954 1404 aaPredicted RBP38.43■■■■□ 3.74
CCDC9-204ENST00000599398 KIAA0586Q9BVV6 1533 aa38.38■■■■□ 3.73
CCDC9-204ENST00000599398 TRHP20396 242 aaPredicted RBP38.29■■■■□ 3.72
CCDC9-204ENST00000599398 RAPGEF2Q9Y4G8 1499 aa38.25■■■■□ 3.71
CCDC9-204ENST00000599398 IQGAP2Q13576 1575 aa38.14■■■■□ 3.7
CCDC9-204ENST00000599398 CARMIL2Q6F5E8 1435 aa38.02■■■■□ 3.68
CCDC9-204ENST00000599398 PRXQ9BXM0 1461 aa37.99■■■■□ 3.67
CCDC9-204ENST00000599398 TTBK1Q5TCY1 1321 aaPredicted RBP37.96■■■■□ 3.67
CCDC9-204ENST00000599398 CTTNBP2Q8WZ74 1663 aa37.93■■■■□ 3.66
CCDC9-204ENST00000599398 CSRNP3Q8WYN3 585 aa37.92■■■■□ 3.66
CCDC9-204ENST00000599398 PTPRGP23470 1445 aa37.92■■■■□ 3.66
CCDC9-204ENST00000599398 TNIKQ9UKE5 1360 aa37.91■■■■□ 3.66
CCDC9-204ENST00000599398 UGGT2Q9NYU1 1516 aa37.88■■■■□ 3.65
CCDC9-204ENST00000599398 ADCY10Q96PN6 1610 aa37.88■■■■□ 3.65
CCDC9-204ENST00000599398 NPM1P06748 294 aaKnown RBP eCLIP37.88■■■■□ 3.65
CCDC9-204ENST00000599398 DISP1Q96F81 1524 aa37.87■■■■□ 3.65
CCDC9-204ENST00000599398 EEA1Q15075 1411 aa37.87■■■■□ 3.65
CCDC9-204ENST00000599398 CHIC1Q5VXU3 224 aa37.83■■■■□ 3.65
CCDC9-204ENST00000599398 FAM9AQ8IZU1 332 aaPredicted RBP37.8■■■■□ 3.64
CCDC9-204ENST00000599398 KIAA0556O60303 1618 aa37.77■■■■□ 3.64
CCDC9-204ENST00000599398 MAPKBP1O60336 1514 aa37.68■■■■□ 3.62
CCDC9-204ENST00000599398 GOLGA3Q08378 1498 aa37.68■■■■□ 3.62
CCDC9-204ENST00000599398 KIF13AQ9H1H9 1805 aa37.65■■■■□ 3.62
CCDC9-204ENST00000599398 UACAQ9BZF9 1416 aa37.64■■■■□ 3.62
CCDC9-204ENST00000599398 ABCC2Q92887 1545 aa37.61■■■■□ 3.61
CCDC9-204ENST00000599398 UHRF1BP1LA0JNW5 1464 aa37.59■■■■□ 3.61
CCDC9-204ENST00000599398 ABCC10Q5T3U5 1492 aa37.58■■■■□ 3.61
CCDC9-204ENST00000599398 FAM69CQ0P6D2 419 aa37.57■■■■□ 3.6
CCDC9-204ENST00000599398 KIF21BO75037 1637 aa37.51■■■■□ 3.6
CCDC9-204ENST00000599398 DIP2BQ9P265 1576 aa37.51■■■■□ 3.59
CCDC9-204ENST00000599398 P3H3Q8IVL6 736 aa37.47■■■■□ 3.59
CCDC9-204ENST00000599398 PLB1Q6P1J6 1458 aa37.45■■■■□ 3.59
CCDC9-204ENST00000599398 KDM5BQ9UGL1 1544 aa37.43■■■■□ 3.58
CCDC9-204ENST00000599398 ASXL2Q76L83 1435 aa37.43■■■■□ 3.58
CCDC9-204ENST00000599398 RANGAP1P46060 587 aaPredicted RBP37.42■■■■□ 3.58
CCDC9-204ENST00000599398 EHMT2Q96KQ7 1210 aa37.4■■■■□ 3.58
CCDC9-204ENST00000599398 ZCCHC11Q5TAX3 1644 aaKnown RBP37.39■■■■□ 3.58
CCDC9-204ENST00000599398 SAMD9Q5K651 1589 aa37.38■■■■□ 3.58
CCDC9-204ENST00000599398 ABCA8O94911 1581 aa37.37■■■■□ 3.57
CCDC9-204ENST00000599398 TSPOAP1O95153 1857 aa37.3■■■■□ 3.56
CCDC9-204ENST00000599398 UBTFP17480 764 aaKnown RBP37.29■■■■□ 3.56
CCDC9-204ENST00000599398 GLI2P10070 1586 aa37.21■■■■□ 3.55
CCDC9-204ENST00000599398 FHOD3Q2V2M9 1422 aa37.19■■■■□ 3.54
CCDC9-204ENST00000599398 EPRSP07814 1512 aaKnown RBP37.19■■■■□ 3.54
CCDC9-204ENST00000599398 ARID3CA6NKF2 412 aa37.17■■■■□ 3.54
CCDC9-204ENST00000599398 WDR7Q9Y4E6 1490 aa37.17■■■■□ 3.54
CCDC9-204ENST00000599398 EFCAB5A4FU69 1503 aa37.15■■■■□ 3.54
CCDC9-204ENST00000599398 RAPGEF6Q8TEU7 1601 aa37.14■■■■□ 3.54
CCDC9-204ENST00000599398 ATP10BO94823 1461 aa37.07■■■■□ 3.52
CCDC9-204ENST00000599398 KCNH8Q96L42 1107 aa37.06■■■■□ 3.52
CCDC9-204ENST00000599398 MAP3K4Q9Y6R4 1608 aa37.05■■■■□ 3.52
CCDC9-204ENST00000599398 PPRC1Q5VV67 1664 aaKnown RBP37.05■■■■□ 3.52
CCDC9-204ENST00000599398 KDM6BO15054 1643 aa37.04■■■■□ 3.52
CCDC9-204ENST00000599398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37■■■■□ 3.51
CCDC9-204ENST00000599398 HNRNPUL2Q1KMD3 747 aaKnown RBP37■■■■□ 3.51
CCDC9-204ENST00000599398 NUP153P49790 1475 aaKnown RBP36.97■■■■□ 3.51
CCDC9-204ENST00000599398 TEX14Q8IWB6 1497 aa36.92■■■■□ 3.5
CCDC9-204ENST00000599398 ARHGAP35Q9NRY4 1499 aa36.92■■■■□ 3.5
CCDC9-204ENST00000599398 CFAP43Q8NDM7 1665 aa36.9■■■■□ 3.5
CCDC9-204ENST00000599398 CD109Q6YHK3 1445 aa36.88■■■■□ 3.49
CCDC9-204ENST00000599398 FMN1Q68DA7 1419 aa36.84■■■■□ 3.49
CCDC9-204ENST00000599398 ATP1B4Q9UN42 357 aaPredicted RBP36.79■■■■□ 3.48
CCDC9-204ENST00000599398 MAGI3Q5TCQ9 1506 aa36.79■■■■□ 3.48
CCDC9-204ENST00000599398 PLEKHD1A6NEE1 506 aa36.76■■■■□ 3.48
CCDC9-204ENST00000599398 ABCA9Q8IUA7 1624 aa36.74■■■■□ 3.47
CCDC9-204ENST00000599398 HECW1Q76N89 1606 aa36.72■■■■□ 3.47
CCDC9-204ENST00000599398 COL17A1Q9UMD9 1497 aaPredicted RBP36.72■■■■□ 3.47
CCDC9-204ENST00000599398 CDK13Q14004 1512 aaKnown RBP36.71■■■■□ 3.47
CCDC9-204ENST00000599398 AEBP2Q6ZN18 517 aaPredicted RBP36.64■■■■□ 3.46
CCDC9-204ENST00000599398 CLIP1P30622 1438 aa36.61■■■■□ 3.45
CCDC9-204ENST00000599398 CDK11AQ9UQ88 783 aaPredicted RBP36.53■■■■□ 3.44
CCDC9-204ENST00000599398 PCF11O94913 1555 aaKnown RBP36.52■■■■□ 3.44
CCDC9-204ENST00000599398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.51■■■■□ 3.443e-6■□□□□ 8.9
CCDC9-204ENST00000599398 LRRIQ1Q96JM4 1722 aa36.5■■■■□ 3.43
CCDC9-204ENST00000599398 CASKIN1Q8WXD9 1431 aa36.5■■■■□ 3.43
CCDC9-204ENST00000599398 PHLDB1Q86UU1 1377 aa36.48■■■■□ 3.43
CCDC9-204ENST00000599398 ARAP3Q8WWN8 1544 aa36.48■■■■□ 3.43
CCDC9-204ENST00000599398 TTC37Q6PGP7 1564 aa36.48■■■■□ 3.43
CCDC9-204ENST00000599398 NEO1Q92859 1461 aa36.47■■■■□ 3.43
CCDC9-204ENST00000599398 CCDC18Q5T9S5 1454 aa36.4■■■■□ 3.42
CCDC9-204ENST00000599398 FYCO1Q9BQS8 1478 aa36.39■■■■□ 3.42
CCDC9-204ENST00000599398 TROQ12816 1431 aaPredicted RBP36.38■■■■□ 3.41
CCDC9-204ENST00000599398 FANCAO15360 1455 aa36.37■■■■□ 3.41
CCDC9-204ENST00000599398 CEP162Q5TB80 1403 aa36.36■■■■□ 3.41
CCDC9-204ENST00000599398 CFAP74Q9C0B2 1584 aa36.36■■■■□ 3.41
CCDC9-204ENST00000599398 KIF14Q15058 1648 aa36.35■■■■□ 3.41
CCDC9-204ENST00000599398 RAPGEF3O95398 923 aa36.34■■■■□ 3.41
CCDC9-204ENST00000599398 KDM4FA0A1W2PPD8 638 aa36.33■■■■□ 3.41
CCDC9-204ENST00000599398 LOC105371045A0A1W2PR82 267 aa36.32■■■■□ 3.4
CCDC9-204ENST00000599398 AKNAQ7Z591 1439 aa36.32■■■■□ 3.4
CCDC9-204ENST00000599398 PLCH2O75038 1416 aa36.29■■■■□ 3.4
CCDC9-204ENST00000599398 MYO5CQ9NQX4 1742 aa36.28■■■■□ 3.4
CCDC9-204ENST00000599398 DENND4BO75064 1496 aaPredicted RBP36.24■■■■□ 3.39
CCDC9-204ENST00000599398 ADGRL1O94910 1474 aa36.24■■■■□ 3.39
CCDC9-204ENST00000599398 FRMPD1Q5SYB0 1578 aa36.23■■■■□ 3.39
CCDC9-204ENST00000599398 EFCAB2Q5VUJ9 269 aa36.18■■■■□ 3.38
CCDC9-204ENST00000599398 RICTORQ6R327 1708 aa36.17■■■■□ 3.38
CCDC9-204ENST00000599398 ARHGAP5Q13017 1502 aa36.15■■■■□ 3.38
CCDC9-204ENST00000599398 SCAPERQ9BY12 1400 aa36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms