RNA–Protein interactions for RNA: ENST00000599310.5

SMIM7-217, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,123 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-217ENST00000599310 RUSC2Q8N2Y8 1516 aa27.94■■■□□ 2.06
SMIM7-217ENST00000599310 JPH4Q96JJ6 628 aa27.94■■■□□ 2.06
SMIM7-217ENST00000599310 PRG4Q92954 1404 aaPredicted RBP27.9■■■□□ 2.06
SMIM7-217ENST00000599310 KIAA0586Q9BVV6 1533 aa27.89■■■□□ 2.06
SMIM7-217ENST00000599310 RAPGEF2Q9Y4G8 1499 aa27.78■■■□□ 2.04
SMIM7-217ENST00000599310 IQGAP2Q13576 1575 aa27.69■■■□□ 2.02
SMIM7-217ENST00000599310 CARMIL2Q6F5E8 1435 aa27.68■■■□□ 2.02
SMIM7-217ENST00000599310 KIF13AQ9H1H9 1805 aa27.64■■■□□ 2.01
SMIM7-217ENST00000599310 NPM1P06748 294 aaKnown RBP eCLIP27.6■■■□□ 2.01
SMIM7-217ENST00000599310 PRXQ9BXM0 1461 aa27.57■■■□□ 2
SMIM7-217ENST00000599310 TNIKQ9UKE5 1360 aa27.56■■■□□ 2
SMIM7-217ENST00000599310 PTPRGP23470 1445 aa27.56■■■□□ 2
SMIM7-217ENST00000599310 EEA1Q15075 1411 aa27.56■■■□□ 2
SMIM7-217ENST00000599310 ADCY10Q96PN6 1610 aa27.52■■■□□ 2
SMIM7-217ENST00000599310 CSRNP3Q8WYN3 585 aa27.52■■■□□ 2
SMIM7-217ENST00000599310 UGGT2Q9NYU1 1516 aa27.51■■■□□ 2
SMIM7-217ENST00000599310 CTTNBP2Q8WZ74 1663 aa27.5■■□□□ 1.99
SMIM7-217ENST00000599310 MAPKBP1O60336 1514 aa27.46■■□□□ 1.99
SMIM7-217ENST00000599310 TTBK1Q5TCY1 1321 aaPredicted RBP27.46■■□□□ 1.99
SMIM7-217ENST00000599310 DISP1Q96F81 1524 aa27.46■■□□□ 1.99
SMIM7-217ENST00000599310 GOLGA3Q08378 1498 aa27.43■■□□□ 1.98
SMIM7-217ENST00000599310 ABCC10Q5T3U5 1492 aa27.43■■□□□ 1.98
SMIM7-217ENST00000599310 KIAA0556O60303 1618 aa27.41■■□□□ 1.98
SMIM7-217ENST00000599310 DIP2BQ9P265 1576 aa27.39■■□□□ 1.98
SMIM7-217ENST00000599310 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
SMIM7-217ENST00000599310 UACAQ9BZF9 1416 aa27.35■■□□□ 1.97
SMIM7-217ENST00000599310 UHRF1BP1LA0JNW5 1464 aa27.34■■□□□ 1.97
SMIM7-217ENST00000599310 FAM9AQ8IZU1 332 aaPredicted RBP27.34■■□□□ 1.97
SMIM7-217ENST00000599310 ABCC2Q92887 1545 aa27.33■■□□□ 1.97
SMIM7-217ENST00000599310 FAM69CQ0P6D2 419 aa27.32■■□□□ 1.96
SMIM7-217ENST00000599310 AEBP2Q6ZN18 517 aaPredicted RBP27.22■■□□□ 1.95
SMIM7-217ENST00000599310 KIF21BO75037 1637 aa27.22■■□□□ 1.95
SMIM7-217ENST00000599310 PLB1Q6P1J6 1458 aa27.21■■□□□ 1.95
SMIM7-217ENST00000599310 TSPOAP1O95153 1857 aa27.19■■□□□ 1.94
SMIM7-217ENST00000599310 KDM5BQ9UGL1 1544 aa27.19■■□□□ 1.94
SMIM7-217ENST00000599310 ASXL2Q76L83 1435 aa27.17■■□□□ 1.94
SMIM7-217ENST00000599310 ZCCHC11Q5TAX3 1644 aaKnown RBP27.12■■□□□ 1.93
SMIM7-217ENST00000599310 ABCA8O94911 1581 aa27.11■■□□□ 1.93
SMIM7-217ENST00000599310 SAMD9Q5K651 1589 aa27.11■■□□□ 1.93
SMIM7-217ENST00000599310 P3H3Q8IVL6 736 aa27.11■■□□□ 1.93
SMIM7-217ENST00000599310 KDM6BO15054 1643 aa27.11■■□□□ 1.93
SMIM7-217ENST00000599310 PPRC1Q5VV67 1664 aaKnown RBP27.09■■□□□ 1.93
SMIM7-217ENST00000599310 GLI2P10070 1586 aa27.07■■□□□ 1.92
SMIM7-217ENST00000599310 UBTFP17480 764 aaKnown RBP27.05■■□□□ 1.92
SMIM7-217ENST00000599310 RANGAP1P46060 587 aaPredicted RBP27.05■■□□□ 1.92
SMIM7-217ENST00000599310 EFCAB5A4FU69 1503 aa27.02■■□□□ 1.92
SMIM7-217ENST00000599310 WDR7Q9Y4E6 1490 aa27.01■■□□□ 1.91
SMIM7-217ENST00000599310 EPRSP07814 1512 aaKnown RBP27■■□□□ 1.91
SMIM7-217ENST00000599310 EHMT2Q96KQ7 1210 aa26.96■■□□□ 1.91
SMIM7-217ENST00000599310 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
SMIM7-217ENST00000599310 MAP3K4Q9Y6R4 1608 aa26.94■■□□□ 1.9
SMIM7-217ENST00000599310 FHOD3Q2V2M9 1422 aa26.94■■□□□ 1.9
SMIM7-217ENST00000599310 TEX14Q8IWB6 1497 aa26.9■■□□□ 1.9
SMIM7-217ENST00000599310 ATP10BO94823 1461 aa26.89■■□□□ 1.9
SMIM7-217ENST00000599310 COL17A1Q9UMD9 1497 aaPredicted RBP26.87■■□□□ 1.89
SMIM7-217ENST00000599310 KDM4FA0A1W2PPD8 638 aa26.87■■□□□ 1.89
SMIM7-217ENST00000599310 ARID3CA6NKF2 412 aa26.87■■□□□ 1.89
SMIM7-217ENST00000599310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.87■■□□□ 1.89
SMIM7-217ENST00000599310 HNRNPUL2Q1KMD3 747 aaKnown RBP26.87■■□□□ 1.89
SMIM7-217ENST00000599310 KCNH8Q96L42 1107 aa26.87■■□□□ 1.89
SMIM7-217ENST00000599310 CFAP43Q8NDM7 1665 aa26.82■■□□□ 1.88
SMIM7-217ENST00000599310 CD109Q6YHK3 1445 aa26.81■■□□□ 1.88
SMIM7-217ENST00000599310 NUP153P49790 1475 aaKnown RBP26.81■■□□□ 1.88
SMIM7-217ENST00000599310 FMN1Q68DA7 1419 aa26.79■■□□□ 1.88
SMIM7-217ENST00000599310 MAGI3Q5TCQ9 1506 aa26.75■■□□□ 1.87
SMIM7-217ENST00000599310 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
SMIM7-217ENST00000599310 PLEKHD1A6NEE1 506 aa26.73■■□□□ 1.87
SMIM7-217ENST00000599310 ABCA9Q8IUA7 1624 aa26.68■■□□□ 1.86
SMIM7-217ENST00000599310 ATP1B4Q9UN42 357 aaPredicted RBP26.67■■□□□ 1.86
SMIM7-217ENST00000599310 HECW1Q76N89 1606 aa26.67■■□□□ 1.86
SMIM7-217ENST00000599310 ADGRL1O94910 1474 aa26.63■■□□□ 1.85
SMIM7-217ENST00000599310 PHLDB1Q86UU1 1377 aa26.61■■□□□ 1.85
SMIM7-217ENST00000599310 CDK11AQ9UQ88 783 aaPredicted RBP26.61■■□□□ 1.85
SMIM7-217ENST00000599310 CDK13Q14004 1512 aaKnown RBP26.58■■□□□ 1.85
SMIM7-217ENST00000599310 CLIP1P30622 1438 aa26.56■■□□□ 1.84
SMIM7-217ENST00000599310 NEO1Q92859 1461 aa26.54■■□□□ 1.84
SMIM7-217ENST00000599310 ARAP3Q8WWN8 1544 aa26.53■■□□□ 1.84
SMIM7-217ENST00000599310 CASKIN1Q8WXD9 1431 aa26.5■■□□□ 1.83
SMIM7-217ENST00000599310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.49■■□□□ 1.83
SMIM7-217ENST00000599310 CCDC18Q5T9S5 1454 aa26.48■■□□□ 1.83
SMIM7-217ENST00000599310 CFAP74Q9C0B2 1584 aa26.46■■□□□ 1.83
SMIM7-217ENST00000599310 PCF11O94913 1555 aaKnown RBP26.45■■□□□ 1.82
SMIM7-217ENST00000599310 FYCO1Q9BQS8 1478 aa26.44■■□□□ 1.82
SMIM7-217ENST00000599310 TROQ12816 1431 aaPredicted RBP26.43■■□□□ 1.82
SMIM7-217ENST00000599310 TTC37Q6PGP7 1564 aa26.42■■□□□ 1.82
SMIM7-217ENST00000599310 FANCAO15360 1455 aa26.42■■□□□ 1.82
SMIM7-217ENST00000599310 KIF14Q15058 1648 aa26.41■■□□□ 1.82
SMIM7-217ENST00000599310 AKNAQ7Z591 1439 aa26.38■■□□□ 1.81
SMIM7-217ENST00000599310 PLCH2O75038 1416 aa26.37■■□□□ 1.81
SMIM7-217ENST00000599310 LRRIQ1Q96JM4 1722 aa26.36■■□□□ 1.81
SMIM7-217ENST00000599310 RAPGEF3O95398 923 aa26.35■■□□□ 1.81
SMIM7-217ENST00000599310 CEP162Q5TB80 1403 aa26.35■■□□□ 1.81
SMIM7-217ENST00000599310 DENND4BO75064 1496 aaPredicted RBP26.35■■□□□ 1.81
SMIM7-217ENST00000599310 MYO5CQ9NQX4 1742 aa26.33■■□□□ 1.81
SMIM7-217ENST00000599310 FRMPD1Q5SYB0 1578 aa26.33■■□□□ 1.8
SMIM7-217ENST00000599310 EFCAB2Q5VUJ9 269 aa26.32■■□□□ 1.8
SMIM7-217ENST00000599310 HECW2Q9P2P5 1572 aa26.3■■□□□ 1.8
SMIM7-217ENST00000599310 ARHGAP5Q13017 1502 aa26.24■■□□□ 1.79
SMIM7-217ENST00000599310 SCAPERQ9BY12 1400 aa26.23■■□□□ 1.79
SMIM7-217ENST00000599310 RICTORQ6R327 1708 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms