RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 KIF21BO75037 1637 aa25■■□□□ 1.59
GTF2F1-206ENST00000598607 KIAA0586Q9BVV6 1533 aa24.99■■□□□ 1.59
GTF2F1-206ENST00000598607 RIMBP3CA6NJZ7 1639 aa24.98■■□□□ 1.59
GTF2F1-206ENST00000598607 RIMBP3BA6NNM3 1639 aa24.98■■□□□ 1.59
GTF2F1-206ENST00000598607 RIMBP3Q9UFD9 1639 aa24.98■■□□□ 1.59
GTF2F1-206ENST00000598607 ARHGEF11O15085 1522 aa24.97■■□□□ 1.59
GTF2F1-206ENST00000598607 IQGAP2Q13576 1575 aa24.94■■□□□ 1.58
GTF2F1-206ENST00000598607 JPH4Q96JJ6 628 aa24.87■■□□□ 1.57
GTF2F1-206ENST00000598607 GOLGA3Q08378 1498 aa24.83■■□□□ 1.56
GTF2F1-206ENST00000598607 PRG4Q92954 1404 aaPredicted RBP24.82■■□□□ 1.56
GTF2F1-206ENST00000598607 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
GTF2F1-206ENST00000598607 UGGT2Q9NYU1 1516 aa24.78■■□□□ 1.56
GTF2F1-206ENST00000598607 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
GTF2F1-206ENST00000598607 CARMIL2Q6F5E8 1435 aa24.74■■□□□ 1.55
GTF2F1-206ENST00000598607 KIAA0556O60303 1618 aa24.69■■□□□ 1.54
GTF2F1-206ENST00000598607 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
GTF2F1-206ENST00000598607 DISP1Q96F81 1524 aa24.67■■□□□ 1.54
GTF2F1-206ENST00000598607 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
GTF2F1-206ENST00000598607 EHMT2Q96KQ7 1210 aa24.66■■□□□ 1.54
GTF2F1-206ENST00000598607 SAMD9Q5K651 1589 aa24.62■■□□□ 1.53
GTF2F1-206ENST00000598607 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
GTF2F1-206ENST00000598607 EFCAB5A4FU69 1503 aa24.57■■□□□ 1.52
GTF2F1-206ENST00000598607 PTPRGP23470 1445 aa24.56■■□□□ 1.52
GTF2F1-206ENST00000598607 RANGAP1P46060 587 aaPredicted RBP24.49■■□□□ 1.51
GTF2F1-206ENST00000598607 TTBK1Q5TCY1 1321 aaPredicted RBP24.47■■□□□ 1.51
GTF2F1-206ENST00000598607 ADCY10Q96PN6 1610 aa24.46■■□□□ 1.51
GTF2F1-206ENST00000598607 P3H3Q8IVL6 736 aa24.44■■□□□ 1.5
GTF2F1-206ENST00000598607 UACAQ9BZF9 1416 aa24.42■■□□□ 1.5
GTF2F1-206ENST00000598607 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
GTF2F1-206ENST00000598607 FHOD3Q2V2M9 1422 aa24.41■■□□□ 1.5
GTF2F1-206ENST00000598607 ABCC2Q92887 1545 aa24.4■■□□□ 1.5
GTF2F1-206ENST00000598607 UHRF1BP1LA0JNW5 1464 aa24.4■■□□□ 1.5
GTF2F1-206ENST00000598607 ABCA8O94911 1581 aa24.38■■□□□ 1.49
GTF2F1-206ENST00000598607 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
GTF2F1-206ENST00000598607 CLIP1P30622 1438 aa24.35■■□□□ 1.49
GTF2F1-206ENST00000598607 RAPGEF6Q8TEU7 1601 aa24.35■■□□□ 1.49
GTF2F1-206ENST00000598607 PLB1Q6P1J6 1458 aa24.35■■□□□ 1.49
GTF2F1-206ENST00000598607 NPM1P06748 294 aaKnown RBP eCLIP24.34■■□□□ 1.49
GTF2F1-206ENST00000598607 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
GTF2F1-206ENST00000598607 CEP162Q5TB80 1403 aa24.3■■□□□ 1.48
GTF2F1-206ENST00000598607 ZCCHC11Q5TAX3 1644 aaKnown RBP24.29■■□□□ 1.48
GTF2F1-206ENST00000598607 KDM5BQ9UGL1 1544 aa24.28■■□□□ 1.48
GTF2F1-206ENST00000598607 MAPKBP1O60336 1514 aa24.27■■□□□ 1.48
GTF2F1-206ENST00000598607 HECW1Q76N89 1606 aa24.21■■□□□ 1.47
GTF2F1-206ENST00000598607 NUP153P49790 1475 aaKnown RBP24.18■■□□□ 1.46
GTF2F1-206ENST00000598607 KIF13AQ9H1H9 1805 aa24.16■■□□□ 1.46
GTF2F1-206ENST00000598607 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
GTF2F1-206ENST00000598607 ATP10BO94823 1461 aa24.14■■□□□ 1.46
GTF2F1-206ENST00000598607 ASXL2Q76L83 1435 aa24.13■■□□□ 1.45
GTF2F1-206ENST00000598607 CASKIN1Q8WXD9 1431 aa24.12■■□□□ 1.45
GTF2F1-206ENST00000598607 LRRIQ1Q96JM4 1722 aa24.12■■□□□ 1.45
GTF2F1-206ENST00000598607 FYCO1Q9BQS8 1478 aa24.11■■□□□ 1.45
GTF2F1-206ENST00000598607 TRHP20396 242 aaPredicted RBP24.1■■□□□ 1.45
GTF2F1-206ENST00000598607 DIP2BQ9P265 1576 aa24.1■■□□□ 1.45
GTF2F1-206ENST00000598607 ABCC10Q5T3U5 1492 aa24.08■■□□□ 1.45
GTF2F1-206ENST00000598607 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.45
GTF2F1-206ENST00000598607 WDR7Q9Y4E6 1490 aa24.07■■□□□ 1.44
GTF2F1-206ENST00000598607 EPRSP07814 1512 aaKnown RBP24.07■■□□□ 1.44
GTF2F1-206ENST00000598607 ARID3CA6NKF2 412 aa24.07■■□□□ 1.44
GTF2F1-206ENST00000598607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
GTF2F1-206ENST00000598607 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
GTF2F1-206ENST00000598607 CCDC18Q5T9S5 1454 aa24.05■■□□□ 1.44
GTF2F1-206ENST00000598607 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
GTF2F1-206ENST00000598607 GLI2P10070 1586 aa24.02■■□□□ 1.44
GTF2F1-206ENST00000598607 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
GTF2F1-206ENST00000598607 FAM69CQ0P6D2 419 aa23.98■■□□□ 1.43
GTF2F1-206ENST00000598607 PLEKHD1A6NEE1 506 aa23.97■■□□□ 1.43
GTF2F1-206ENST00000598607 TSPOAP1O95153 1857 aa23.96■■□□□ 1.43
GTF2F1-206ENST00000598607 CFAP43Q8NDM7 1665 aa23.96■■□□□ 1.43
GTF2F1-206ENST00000598607 CDK11AQ9UQ88 783 aaPredicted RBP23.96■■□□□ 1.43
GTF2F1-206ENST00000598607 MAP3K4Q9Y6R4 1608 aa23.94■■□□□ 1.42
GTF2F1-206ENST00000598607 KCNH8Q96L42 1107 aa23.92■■□□□ 1.42
GTF2F1-206ENST00000598607 ABCA9Q8IUA7 1624 aa23.91■■□□□ 1.42
GTF2F1-206ENST00000598607 TROQ12816 1431 aaPredicted RBP23.87■■□□□ 1.41
GTF2F1-206ENST00000598607 KIF14Q15058 1648 aa23.87■■□□□ 1.41
GTF2F1-206ENST00000598607 PPRC1Q5VV67 1664 aaKnown RBP23.86■■□□□ 1.41
GTF2F1-206ENST00000598607 TIAM1Q13009 1591 aa23.84■■□□□ 1.41
GTF2F1-206ENST00000598607 MAGI3Q5TCQ9 1506 aa23.82■■□□□ 1.4
GTF2F1-206ENST00000598607 MAP3K1Q13233 1512 aa23.81■■□□□ 1.4
GTF2F1-206ENST00000598607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.81■■□□□ 1.4
GTF2F1-206ENST00000598607 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
GTF2F1-206ENST00000598607 MYO5CQ9NQX4 1742 aa23.8■■□□□ 1.4
GTF2F1-206ENST00000598607 TEX14Q8IWB6 1497 aa23.8■■□□□ 1.4
GTF2F1-206ENST00000598607 EHBP1L1Q8N3D4 1523 aa23.79■■□□□ 1.4
GTF2F1-206ENST00000598607 TTC37Q6PGP7 1564 aa23.79■■□□□ 1.4
GTF2F1-206ENST00000598607 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
GTF2F1-206ENST00000598607 APLP2Q06481 763 aa23.76■■□□□ 1.39
GTF2F1-206ENST00000598607 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
GTF2F1-206ENST00000598607 CFAP74Q9C0B2 1584 aa23.73■■□□□ 1.39
GTF2F1-206ENST00000598607 CDC42BPAQ5VT25 1732 aa23.7■■□□□ 1.39
GTF2F1-206ENST00000598607 LRRC9Q6ZRR7 1453 aa23.69■■□□□ 1.38
GTF2F1-206ENST00000598607 ARAP3Q8WWN8 1544 aa23.69■■□□□ 1.38
GTF2F1-206ENST00000598607 PREX2Q70Z35 1606 aa23.68■■□□□ 1.38
GTF2F1-206ENST00000598607 CDC42BPBQ9Y5S2 1711 aa23.67■■□□□ 1.38
GTF2F1-206ENST00000598607 KDM6BO15054 1643 aa23.67■■□□□ 1.38
GTF2F1-206ENST00000598607 ITSN2Q9NZM3 1697 aa23.66■■□□□ 1.38
GTF2F1-206ENST00000598607 PLCH2O75038 1416 aa23.66■■□□□ 1.38
GTF2F1-206ENST00000598607 NEO1Q92859 1461 aa23.65■■□□□ 1.38
GTF2F1-206ENST00000598607 PHLDB1Q86UU1 1377 aa23.64■■□□□ 1.37
GTF2F1-206ENST00000598607 FANCAO15360 1455 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms