RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 NISCHQ9Y2I1 1504 aa36.2■■■■□ 3.39
GTF2F1-206ENST00000598607 CCDC180Q9P1Z9 1646 aa32.2■■■□□ 2.75
GTF2F1-206ENST00000598607 ABCC9O60706 1549 aa31.08■■■□□ 2.57
GTF2F1-206ENST00000598607 ZCCHC6Q5VYS8 1495 aaKnown RBP30.22■■■□□ 2.43
GTF2F1-206ENST00000598607 NACADO15069 1562 aa30.15■■■□□ 2.42
GTF2F1-206ENST00000598607 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
GTF2F1-206ENST00000598607 DCAF8L2P0C7V8 631 aa30.06■■■□□ 2.4
GTF2F1-206ENST00000598607 MYO15BQ96JP2 1530 aa30.05■■■□□ 2.4
GTF2F1-206ENST00000598607 DCAF1Q9Y4B6 1507 aa30.01■■■□□ 2.4
GTF2F1-206ENST00000598607 UNC13AQ9UPW8 1703 aa29.53■■■□□ 2.32
GTF2F1-206ENST00000598607 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
GTF2F1-206ENST00000598607 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.26
GTF2F1-206ENST00000598607 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
GTF2F1-206ENST00000598607 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
GTF2F1-206ENST00000598607 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
GTF2F1-206ENST00000598607 CC2D2AQ9P2K1 1620 aa28.2■■■□□ 2.1
GTF2F1-206ENST00000598607 DNAJC5BQ9UF47 199 aa28.18■■■□□ 2.1
GTF2F1-206ENST00000598607 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
GTF2F1-206ENST00000598607 BAZ1AQ9NRL2 1556 aaPredicted RBP28.09■■■□□ 2.09
GTF2F1-206ENST00000598607 SMARCA4P51532 1647 aa28.08■■■□□ 2.09
GTF2F1-206ENST00000598607 MROH2BQ7Z745 1585 aa27.88■■■□□ 2.05
GTF2F1-206ENST00000598607 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
GTF2F1-206ENST00000598607 PEG3Q9GZU2 1588 aa27.81■■■□□ 2.04
GTF2F1-206ENST00000598607 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
GTF2F1-206ENST00000598607 NCAPD3P42695 1498 aa27.75■■■□□ 2.03
GTF2F1-206ENST00000598607 HMGXB3Q12766 1538 aa27.7■■■□□ 2.02
GTF2F1-206ENST00000598607 WIZO95785 1651 aa27.65■■■□□ 2.02
GTF2F1-206ENST00000598607 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
GTF2F1-206ENST00000598607 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
GTF2F1-206ENST00000598607 TOP2AP11388 1531 aaKnown RBP27.37■■□□□ 1.97
GTF2F1-206ENST00000598607 SUPT5HO00267 1087 aaKnown RBP27.11■■□□□ 1.93
GTF2F1-206ENST00000598607 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
GTF2F1-206ENST00000598607 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
GTF2F1-206ENST00000598607 NESP48681 1621 aa26.97■■□□□ 1.91
GTF2F1-206ENST00000598607 CADPSQ9ULU8 1353 aa26.94■■□□□ 1.9
GTF2F1-206ENST00000598607 PRDM2Q13029 1718 aa26.89■■□□□ 1.9
GTF2F1-206ENST00000598607 CFTRP13569 1480 aa26.85■■□□□ 1.89
GTF2F1-206ENST00000598607 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
GTF2F1-206ENST00000598607 PDS5BQ9NTI5 1447 aa26.81■■□□□ 1.88
GTF2F1-206ENST00000598607 KIF21AQ7Z4S6 1674 aa26.79■■□□□ 1.88
GTF2F1-206ENST00000598607 FANCD2Q9BXW9 1451 aa26.65■■□□□ 1.86
GTF2F1-206ENST00000598607 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
GTF2F1-206ENST00000598607 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
GTF2F1-206ENST00000598607 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
GTF2F1-206ENST00000598607 CUX2O14529 1486 aa26.46■■□□□ 1.83
GTF2F1-206ENST00000598607 WDR62O43379 1518 aa26.44■■□□□ 1.82
GTF2F1-206ENST00000598607 URB2Q14146 1524 aaKnown RBP26.35■■□□□ 1.81
GTF2F1-206ENST00000598607 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
GTF2F1-206ENST00000598607 DNMBPQ6XZF7 1577 aa26.3■■□□□ 1.8
GTF2F1-206ENST00000598607 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
GTF2F1-206ENST00000598607 CUX1P39880 1505 aa26.14■■□□□ 1.78
GTF2F1-206ENST00000598607 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
GTF2F1-206ENST00000598607 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
GTF2F1-206ENST00000598607 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
GTF2F1-206ENST00000598607 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
GTF2F1-206ENST00000598607 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
GTF2F1-206ENST00000598607 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
GTF2F1-206ENST00000598607 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
GTF2F1-206ENST00000598607 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
GTF2F1-206ENST00000598607 SOGA1O94964 1423 aa25.93■■□□□ 1.74
GTF2F1-206ENST00000598607 WDR97A6NE52 1622 aa25.9■■□□□ 1.74
GTF2F1-206ENST00000598607 RAD54L2Q9Y4B4 1467 aa25.9■■□□□ 1.74
GTF2F1-206ENST00000598607 EIF4G3O43432 1585 aaKnown RBP25.85■■□□□ 1.73
GTF2F1-206ENST00000598607 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
GTF2F1-206ENST00000598607 ABCA10Q8WWZ4 1543 aa25.8■■□□□ 1.72
GTF2F1-206ENST00000598607 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
GTF2F1-206ENST00000598607 ABCA5Q8WWZ7 1642 aa25.72■■□□□ 1.71
GTF2F1-206ENST00000598607 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
GTF2F1-206ENST00000598607 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
GTF2F1-206ENST00000598607 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
GTF2F1-206ENST00000598607 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
GTF2F1-206ENST00000598607 GRIN2BQ13224 1484 aa25.63■■□□□ 1.69
GTF2F1-206ENST00000598607 MAGI1Q96QZ7 1491 aaPredicted RBP25.55■■□□□ 1.68
GTF2F1-206ENST00000598607 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
GTF2F1-206ENST00000598607 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
GTF2F1-206ENST00000598607 CHD1O14646 1710 aa25.53■■□□□ 1.68
GTF2F1-206ENST00000598607 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
GTF2F1-206ENST00000598607 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
GTF2F1-206ENST00000598607 ADAMTS12P58397 1594 aa25.44■■□□□ 1.66
GTF2F1-206ENST00000598607 SYNJ2O15056 1496 aa25.43■■□□□ 1.66
GTF2F1-206ENST00000598607 CUL7Q14999 1698 aa25.41■■□□□ 1.66
GTF2F1-206ENST00000598607 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
GTF2F1-206ENST00000598607 FBLN2P98095 1184 aa25.37■■□□□ 1.65
GTF2F1-206ENST00000598607 CHMP7Q8WUX9 453 aaPredicted RBP25.36■■□□□ 1.65
GTF2F1-206ENST00000598607 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
GTF2F1-206ENST00000598607 IGF1RP08069 1367 aa25.33■■□□□ 1.65
GTF2F1-206ENST00000598607 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
GTF2F1-206ENST00000598607 GRIN2AQ12879 1464 aa25.3■■□□□ 1.64
GTF2F1-206ENST00000598607 EEA1Q15075 1411 aa25.26■■□□□ 1.63
GTF2F1-206ENST00000598607 DNAJC5Q9H3Z4 198 aa25.24■■□□□ 1.63
GTF2F1-206ENST00000598607 CARMIL1Q5VZK9 1371 aa25.22■■□□□ 1.63
GTF2F1-206ENST00000598607 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
GTF2F1-206ENST00000598607 CEP170Q5SW79 1584 aa25.17■■□□□ 1.62
GTF2F1-206ENST00000598607 NUP160Q12769 1436 aa25.15■■□□□ 1.62
GTF2F1-206ENST00000598607 RAPGEF2Q9Y4G8 1499 aa25.14■■□□□ 1.61
GTF2F1-206ENST00000598607 CSRNP3Q8WYN3 585 aa25.11■■□□□ 1.61
GTF2F1-206ENST00000598607 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
GTF2F1-206ENST00000598607 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
GTF2F1-206ENST00000598607 CTTNBP2Q8WZ74 1663 aa25.03■■□□□ 1.6
GTF2F1-206ENST00000598607 SHROOM2Q13796 1616 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms