RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 JPH4Q96JJ6 628 aa21.18■□□□□ 0.98
C19orf54-208ENST00000598352 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.98
C19orf54-208ENST00000598352 PRG4Q92954 1404 aaPredicted RBP21.12■□□□□ 0.97
C19orf54-208ENST00000598352 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
C19orf54-208ENST00000598352 PRXQ9BXM0 1461 aa21.02■□□□□ 0.96
C19orf54-208ENST00000598352 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
C19orf54-208ENST00000598352 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
C19orf54-208ENST00000598352 IQGAP2Q13576 1575 aa20.95■□□□□ 0.94
C19orf54-208ENST00000598352 EEA1Q15075 1411 aa20.91■□□□□ 0.94
C19orf54-208ENST00000598352 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
C19orf54-208ENST00000598352 UGGT2Q9NYU1 1516 aa20.88■□□□□ 0.93
C19orf54-208ENST00000598352 CARMIL2Q6F5E8 1435 aa20.87■□□□□ 0.93
C19orf54-208ENST00000598352 TRHP20396 242 aaPredicted RBP20.86■□□□□ 0.93
C19orf54-208ENST00000598352 PTPRGP23470 1445 aa20.86■□□□□ 0.93
C19orf54-208ENST00000598352 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
C19orf54-208ENST00000598352 FAM9AQ8IZU1 332 aaPredicted RBP20.83■□□□□ 0.93
C19orf54-208ENST00000598352 ADCY10Q96PN6 1610 aa20.79■□□□□ 0.92
C19orf54-208ENST00000598352 CTTNBP2Q8WZ74 1663 aa20.77■□□□□ 0.92
C19orf54-208ENST00000598352 TTBK1Q5TCY1 1321 aaPredicted RBP20.76■□□□□ 0.91
C19orf54-208ENST00000598352 KIAA0556O60303 1618 aa20.75■□□□□ 0.91
C19orf54-208ENST00000598352 UACAQ9BZF9 1416 aa20.71■□□□□ 0.91
C19orf54-208ENST00000598352 UHRF1BP1LA0JNW5 1464 aa20.71■□□□□ 0.91
C19orf54-208ENST00000598352 NPM1P06748 294 aaKnown RBP eCLIP20.71■□□□□ 0.91
C19orf54-208ENST00000598352 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
C19orf54-208ENST00000598352 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
C19orf54-208ENST00000598352 KIF21BO75037 1637 aa20.68■□□□□ 0.9
C19orf54-208ENST00000598352 ABCC2Q92887 1545 aa20.67■□□□□ 0.9
C19orf54-208ENST00000598352 ABCC10Q5T3U5 1492 aa20.63■□□□□ 0.89
C19orf54-208ENST00000598352 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
C19orf54-208ENST00000598352 P3H3Q8IVL6 736 aa20.61■□□□□ 0.89
C19orf54-208ENST00000598352 KDM5BQ9UGL1 1544 aa20.61■□□□□ 0.89
C19orf54-208ENST00000598352 FAM69CQ0P6D2 419 aa20.59■□□□□ 0.89
C19orf54-208ENST00000598352 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
C19orf54-208ENST00000598352 ABCA8O94911 1581 aa20.58■□□□□ 0.88
C19orf54-208ENST00000598352 KIF13AQ9H1H9 1805 aa20.57■□□□□ 0.88
C19orf54-208ENST00000598352 ASXL2Q76L83 1435 aa20.57■□□□□ 0.88
C19orf54-208ENST00000598352 DIP2BQ9P265 1576 aa20.55■□□□□ 0.88
C19orf54-208ENST00000598352 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
C19orf54-208ENST00000598352 UBTFP17480 764 aaKnown RBP20.53■□□□□ 0.88
C19orf54-208ENST00000598352 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
C19orf54-208ENST00000598352 ZCCHC11Q5TAX3 1644 aaKnown RBP20.49■□□□□ 0.87
C19orf54-208ENST00000598352 FHOD3Q2V2M9 1422 aa20.49■□□□□ 0.87
C19orf54-208ENST00000598352 EFCAB5A4FU69 1503 aa20.45■□□□□ 0.86
C19orf54-208ENST00000598352 ATP10BO94823 1461 aa20.44■□□□□ 0.86
C19orf54-208ENST00000598352 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
C19orf54-208ENST00000598352 GLI2P10070 1586 aa20.44■□□□□ 0.86
C19orf54-208ENST00000598352 WDR7Q9Y4E6 1490 aa20.42■□□□□ 0.86
C19orf54-208ENST00000598352 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
C19orf54-208ENST00000598352 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
C19orf54-208ENST00000598352 RAPGEF6Q8TEU7 1601 aa20.38■□□□□ 0.85
C19orf54-208ENST00000598352 NUP153P49790 1475 aaKnown RBP20.38■□□□□ 0.85
C19orf54-208ENST00000598352 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
C19orf54-208ENST00000598352 PPRC1Q5VV67 1664 aaKnown RBP20.32■□□□□ 0.84
C19orf54-208ENST00000598352 TSPOAP1O95153 1857 aa20.32■□□□□ 0.84
C19orf54-208ENST00000598352 MAP3K4Q9Y6R4 1608 aa20.31■□□□□ 0.84
C19orf54-208ENST00000598352 FMN1Q68DA7 1419 aa20.28■□□□□ 0.84
C19orf54-208ENST00000598352 CD109Q6YHK3 1445 aa20.26■□□□□ 0.83
C19orf54-208ENST00000598352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
C19orf54-208ENST00000598352 HNRNPUL2Q1KMD3 747 aaKnown RBP20.24■□□□□ 0.83
C19orf54-208ENST00000598352 MAGI3Q5TCQ9 1506 aa20.23■□□□□ 0.83
C19orf54-208ENST00000598352 COL17A1Q9UMD9 1497 aaPredicted RBP20.23■□□□□ 0.83
C19orf54-208ENST00000598352 CLIP1P30622 1438 aa20.21■□□□□ 0.83
C19orf54-208ENST00000598352 PLEKHD1A6NEE1 506 aa20.21■□□□□ 0.83
C19orf54-208ENST00000598352 TEX14Q8IWB6 1497 aa20.21■□□□□ 0.83
C19orf54-208ENST00000598352 CDK13Q14004 1512 aaKnown RBP20.21■□□□□ 0.83
C19orf54-208ENST00000598352 KDM6BO15054 1643 aa20.2■□□□□ 0.82
C19orf54-208ENST00000598352 CFAP43Q8NDM7 1665 aa20.19■□□□□ 0.82
C19orf54-208ENST00000598352 ABCA9Q8IUA7 1624 aa20.17■□□□□ 0.82
C19orf54-208ENST00000598352 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
C19orf54-208ENST00000598352 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
C19orf54-208ENST00000598352 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
C19orf54-208ENST00000598352 HECW1Q76N89 1606 aa20.15■□□□□ 0.82
C19orf54-208ENST00000598352 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
C19orf54-208ENST00000598352 PCF11O94913 1555 aaKnown RBP20.09■□□□□ 0.81
C19orf54-208ENST00000598352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.09■□□□□ 0.81
C19orf54-208ENST00000598352 CDK11AQ9UQ88 783 aaPredicted RBP20.07■□□□□ 0.8
C19orf54-208ENST00000598352 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
C19orf54-208ENST00000598352 PHLDB1Q86UU1 1377 aa20.07■□□□□ 0.8
C19orf54-208ENST00000598352 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
C19orf54-208ENST00000598352 FYCO1Q9BQS8 1478 aa20.06■□□□□ 0.8
C19orf54-208ENST00000598352 TROQ12816 1431 aaPredicted RBP20.06■□□□□ 0.8
C19orf54-208ENST00000598352 NEO1Q92859 1461 aa20.05■□□□□ 0.8
C19orf54-208ENST00000598352 TTC37Q6PGP7 1564 aa20.04■□□□□ 0.8
C19orf54-208ENST00000598352 CCDC18Q5T9S5 1454 aa20.02■□□□□ 0.8
C19orf54-208ENST00000598352 PLCH2O75038 1416 aa20■□□□□ 0.79
C19orf54-208ENST00000598352 KIF14Q15058 1648 aa19.98■□□□□ 0.79
C19orf54-208ENST00000598352 AKNAQ7Z591 1439 aa19.97■□□□□ 0.79
C19orf54-208ENST00000598352 RAPGEF3O95398 923 aa19.97■□□□□ 0.79
C19orf54-208ENST00000598352 FANCAO15360 1455 aa19.97■□□□□ 0.79
C19orf54-208ENST00000598352 KDM4FA0A1W2PPD8 638 aa19.95■□□□□ 0.78
C19orf54-208ENST00000598352 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
C19orf54-208ENST00000598352 EFCAB2Q5VUJ9 269 aa19.91■□□□□ 0.78
C19orf54-208ENST00000598352 DENND4BO75064 1496 aaPredicted RBP19.9■□□□□ 0.78
C19orf54-208ENST00000598352 CFAP74Q9C0B2 1584 aa19.88■□□□□ 0.77
C19orf54-208ENST00000598352 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
C19orf54-208ENST00000598352 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
C19orf54-208ENST00000598352 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
C19orf54-208ENST00000598352 MYO5CQ9NQX4 1742 aa19.85■□□□□ 0.77
C19orf54-208ENST00000598352 ADGRL1O94910 1474 aa19.85■□□□□ 0.77
C19orf54-208ENST00000598352 RICTORQ6R327 1708 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms