RNA–Protein interactions for RNA: ENST00000597596.1

FARP1-221, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-221ENST00000597596 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.74
FARP1-221ENST00000597596 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
FARP1-221ENST00000597596 RUSC2Q8N2Y8 1516 aa10.4□□□□□ -0.74
FARP1-221ENST00000597596 SHROOM2Q13796 1616 aa10.4□□□□□ -0.75
FARP1-221ENST00000597596 KIAA0586Q9BVV6 1533 aa10.39□□□□□ -0.75
FARP1-221ENST00000597596 FAM69CQ0P6D2 419 aa10.39□□□□□ -0.75
FARP1-221ENST00000597596 PTPRGP23470 1445 aa10.36□□□□□ -0.75
FARP1-221ENST00000597596 CUL7Q14999 1698 aa10.33□□□□□ -0.76
FARP1-221ENST00000597596 AEBP2Q6ZN18 517 aaPredicted RBP10.32□□□□□ -0.76
FARP1-221ENST00000597596 CARMIL2Q6F5E8 1435 aa10.32□□□□□ -0.76
FARP1-221ENST00000597596 RAPGEF2Q9Y4G8 1499 aa10.31□□□□□ -0.76
FARP1-221ENST00000597596 TNIKQ9UKE5 1360 aa10.31□□□□□ -0.76
FARP1-221ENST00000597596 FAM9AQ8IZU1 332 aaPredicted RBP10.3□□□□□ -0.76
FARP1-221ENST00000597596 P3H3Q8IVL6 736 aa10.29□□□□□ -0.76
FARP1-221ENST00000597596 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
FARP1-221ENST00000597596 ADCY10Q96PN6 1610 aa10.27□□□□□ -0.77
FARP1-221ENST00000597596 RANGAP1P46060 587 aaPredicted RBP10.27□□□□□ -0.77
FARP1-221ENST00000597596 ABCC10Q5T3U5 1492 aa10.27□□□□□ -0.77
FARP1-221ENST00000597596 DISP1Q96F81 1524 aa10.25□□□□□ -0.77
FARP1-221ENST00000597596 IQGAP2Q13576 1575 aa10.25□□□□□ -0.77
FARP1-221ENST00000597596 UACAQ9BZF9 1416 aa10.24□□□□□ -0.77
FARP1-221ENST00000597596 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
FARP1-221ENST00000597596 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
FARP1-221ENST00000597596 KCNH8Q96L42 1107 aa10.23□□□□□ -0.77
FARP1-221ENST00000597596 KIF13AQ9H1H9 1805 aa10.22□□□□□ -0.77
FARP1-221ENST00000597596 ASXL2Q76L83 1435 aa10.22□□□□□ -0.77
FARP1-221ENST00000597596 PRXQ9BXM0 1461 aa10.21□□□□□ -0.78
FARP1-221ENST00000597596 MAPKBP1O60336 1514 aa10.21□□□□□ -0.78
FARP1-221ENST00000597596 ABCC2Q92887 1545 aa10.21□□□□□ -0.78
FARP1-221ENST00000597596 UGGT2Q9NYU1 1516 aa10.2□□□□□ -0.78
FARP1-221ENST00000597596 UHRF1BP1LA0JNW5 1464 aa10.18□□□□□ -0.78
FARP1-221ENST00000597596 CHIC1Q5VXU3 224 aa10.18□□□□□ -0.78
FARP1-221ENST00000597596 DIP2BQ9P265 1576 aa10.18□□□□□ -0.78
FARP1-221ENST00000597596 PLB1Q6P1J6 1458 aa10.17□□□□□ -0.78
FARP1-221ENST00000597596 TSPOAP1O95153 1857 aa10.17□□□□□ -0.78
FARP1-221ENST00000597596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.15□□□□□ -0.78
FARP1-221ENST00000597596 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
FARP1-221ENST00000597596 GOLGA3Q08378 1498 aa10.15□□□□□ -0.78
FARP1-221ENST00000597596 KIAA0556O60303 1618 aa10.15□□□□□ -0.79
FARP1-221ENST00000597596 KDM5BQ9UGL1 1544 aa10.14□□□□□ -0.79
FARP1-221ENST00000597596 KDM4FA0A1W2PPD8 638 aa10.14□□□□□ -0.79
FARP1-221ENST00000597596 UBTFP17480 764 aaKnown RBP10.13□□□□□ -0.79
FARP1-221ENST00000597596 EPRSP07814 1512 aaKnown RBP10.12□□□□□ -0.79
FARP1-221ENST00000597596 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
FARP1-221ENST00000597596 CTTNBP2Q8WZ74 1663 aa10.09□□□□□ -0.79
FARP1-221ENST00000597596 KDM6BO15054 1643 aa10.09□□□□□ -0.79
FARP1-221ENST00000597596 ZCCHC11Q5TAX3 1644 aaKnown RBP10.09□□□□□ -0.79
FARP1-221ENST00000597596 ATP1B4Q9UN42 357 aaPredicted RBP10.09□□□□□ -0.79
FARP1-221ENST00000597596 GLI2P10070 1586 aa10.09□□□□□ -0.79
FARP1-221ENST00000597596 EEA1Q15075 1411 aa10.08□□□□□ -0.8
FARP1-221ENST00000597596 CD109Q6YHK3 1445 aa10.08□□□□□ -0.8
FARP1-221ENST00000597596 ATP10BO94823 1461 aa10.08□□□□□ -0.8
FARP1-221ENST00000597596 WDR7Q9Y4E6 1490 aa10.08□□□□□ -0.8
FARP1-221ENST00000597596 ABCA8O94911 1581 aa10.08□□□□□ -0.8
FARP1-221ENST00000597596 FHOD3Q2V2M9 1422 aa10.06□□□□□ -0.8
FARP1-221ENST00000597596 PLEKHD1A6NEE1 506 aa10.05□□□□□ -0.8
FARP1-221ENST00000597596 PPRC1Q5VV67 1664 aaKnown RBP10.04□□□□□ -0.8
FARP1-221ENST00000597596 TEX14Q8IWB6 1497 aa10.03□□□□□ -0.8
FARP1-221ENST00000597596 RAPGEF3O95398 923 aa10.02□□□□□ -0.81
FARP1-221ENST00000597596 MAP3K4Q9Y6R4 1608 aa10.01□□□□□ -0.81
FARP1-221ENST00000597596 MAGI3Q5TCQ9 1506 aa9.99□□□□□ -0.81
FARP1-221ENST00000597596 SAMD9Q5K651 1589 aa9.99□□□□□ -0.81
FARP1-221ENST00000597596 NUP153P49790 1475 aaKnown RBP9.98□□□□□ -0.81
FARP1-221ENST00000597596 RAPGEF6Q8TEU7 1601 aa9.96□□□□□ -0.81
FARP1-221ENST00000597596 KIF21BO75037 1637 aa9.96□□□□□ -0.82
FARP1-221ENST00000597596 ADGRL1O94910 1474 aa9.95□□□□□ -0.82
FARP1-221ENST00000597596 CFAP43Q8NDM7 1665 aa9.94□□□□□ -0.82
FARP1-221ENST00000597596 ARID4BQ4LE39 1312 aaPredicted RBP9.94□□□□□ -0.82
FARP1-221ENST00000597596 PHLDB1Q86UU1 1377 aa9.92□□□□□ -0.82
FARP1-221ENST00000597596 CDK11AQ9UQ88 783 aaPredicted RBP9.92□□□□□ -0.82
FARP1-221ENST00000597596 ARAP3Q8WWN8 1544 aa9.92□□□□□ -0.82
FARP1-221ENST00000597596 ARHGAP35Q9NRY4 1499 aa9.91□□□□□ -0.82
FARP1-221ENST00000597596 EFCAB5A4FU69 1503 aa9.91□□□□□ -0.82
FARP1-221ENST00000597596 PLPPR3Q6T4P5 718 aa9.9□□□□□ -0.82
FARP1-221ENST00000597596 CDK13Q14004 1512 aaKnown RBP9.9□□□□□ -0.82
FARP1-221ENST00000597596 AKNAQ7Z591 1439 aa9.9□□□□□ -0.83
FARP1-221ENST00000597596 ABCA9Q8IUA7 1624 aa9.89□□□□□ -0.83
FARP1-221ENST00000597596 EFCAB2Q5VUJ9 269 aa9.89□□□□□ -0.83
FARP1-221ENST00000597596 FMN1Q68DA7 1419 aa9.89□□□□□ -0.83
FARP1-221ENST00000597596 NEO1Q92859 1461 aa9.88□□□□□ -0.83
FARP1-221ENST00000597596 MLECQ14165 292 aa9.87□□□□□ -0.83
FARP1-221ENST00000597596 MYT1LQ9UL68 1186 aa9.87□□□□□ -0.83
FARP1-221ENST00000597596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.87□□□□□ -0.83
FARP1-221ENST00000597596 DENND4BO75064 1496 aaPredicted RBP9.86□□□□□ -0.83
FARP1-221ENST00000597596 AFAP1Q8N556 730 aa9.86□□□□□ -0.83
FARP1-221ENST00000597596 FANCAO15360 1455 aa9.85□□□□□ -0.83
FARP1-221ENST00000597596 PLCH2O75038 1416 aa9.85□□□□□ -0.83
FARP1-221ENST00000597596 SCAPERQ9BY12 1400 aa9.85□□□□□ -0.83
FARP1-221ENST00000597596 LOC105371045A0A1W2PR82 267 aa9.85□□□□□ -0.83
FARP1-221ENST00000597596 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
FARP1-221ENST00000597596 TTC37Q6PGP7 1564 aa9.82□□□□□ -0.84
FARP1-221ENST00000597596 CLIP1P30622 1438 aa9.82□□□□□ -0.84
FARP1-221ENST00000597596 TROQ12816 1431 aaPredicted RBP9.82□□□□□ -0.84
FARP1-221ENST00000597596 CASKIN1Q8WXD9 1431 aa9.81□□□□□ -0.84
FARP1-221ENST00000597596 YEATS2Q9ULM3 1422 aa9.81□□□□□ -0.84
FARP1-221ENST00000597596 HECW1Q76N89 1606 aa9.8□□□□□ -0.84
FARP1-221ENST00000597596 FRMPD1Q5SYB0 1578 aa9.79□□□□□ -0.84
FARP1-221ENST00000597596 PTPRMP28827 1452 aa9.79□□□□□ -0.84
FARP1-221ENST00000597596 CEBPAP49715 358 aaPredicted RBP9.78□□□□□ -0.84
FARP1-221ENST00000597596 HNRNPMP52272 730 aaKnown RBP eCLIP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms