RNA–Protein interactions for RNA: ENST00000597596.1

FARP1-221, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-221ENST00000597596 NISCHQ9Y2I1 1504 aa14.93□□□□□ -0.02
FARP1-221ENST00000597596 ABCC9O60706 1549 aa13.37□□□□□ -0.27
FARP1-221ENST00000597596 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.29
FARP1-221ENST00000597596 DCAF8L2P0C7V8 631 aa12.85□□□□□ -0.35
FARP1-221ENST00000597596 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
FARP1-221ENST00000597596 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
FARP1-221ENST00000597596 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.394e-22■■□□□ 13.3
FARP1-221ENST00000597596 NACADO15069 1562 aa12.56□□□□□ -0.4
FARP1-221ENST00000597596 MYO15BQ96JP2 1530 aa12.36□□□□□ -0.43
FARP1-221ENST00000597596 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
FARP1-221ENST00000597596 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
FARP1-221ENST00000597596 BICRAQ9NZM4 1560 aa12.28□□□□□ -0.44
FARP1-221ENST00000597596 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
FARP1-221ENST00000597596 SCRIBQ14160 1630 aa12.19□□□□□ -0.46
FARP1-221ENST00000597596 SHROOM4Q9ULL8 1493 aa12.01□□□□□ -0.49
FARP1-221ENST00000597596 CECR2Q9BXF3 1484 aa12□□□□□ -0.49
FARP1-221ENST00000597596 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
FARP1-221ENST00000597596 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
FARP1-221ENST00000597596 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
FARP1-221ENST00000597596 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
FARP1-221ENST00000597596 SMARCA4P51532 1647 aa11.58□□□□□ -0.56
FARP1-221ENST00000597596 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
FARP1-221ENST00000597596 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
FARP1-221ENST00000597596 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
FARP1-221ENST00000597596 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.56
FARP1-221ENST00000597596 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
FARP1-221ENST00000597596 NESP48681 1621 aa11.5□□□□□ -0.57
FARP1-221ENST00000597596 HMGXB3Q12766 1538 aa11.48□□□□□ -0.57
FARP1-221ENST00000597596 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
FARP1-221ENST00000597596 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
FARP1-221ENST00000597596 WIZO95785 1651 aa11.38□□□□□ -0.59
FARP1-221ENST00000597596 CUX2O14529 1486 aa11.38□□□□□ -0.59
FARP1-221ENST00000597596 RSF1Q96T23 1441 aaPredicted RBP11.35□□□□□ -0.59
FARP1-221ENST00000597596 CADPSQ9ULU8 1353 aa11.35□□□□□ -0.59
FARP1-221ENST00000597596 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
FARP1-221ENST00000597596 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
FARP1-221ENST00000597596 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
FARP1-221ENST00000597596 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
FARP1-221ENST00000597596 TOP2AP11388 1531 aaKnown RBP11.19□□□□□ -0.62
FARP1-221ENST00000597596 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
FARP1-221ENST00000597596 CFTRP13569 1480 aa11.19□□□□□ -0.62
FARP1-221ENST00000597596 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
FARP1-221ENST00000597596 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
FARP1-221ENST00000597596 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
FARP1-221ENST00000597596 WDR62O43379 1518 aa11.11□□□□□ -0.63
FARP1-221ENST00000597596 SUPT5HO00267 1087 aaKnown RBP11.09□□□□□ -0.63
FARP1-221ENST00000597596 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
FARP1-221ENST00000597596 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
FARP1-221ENST00000597596 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
FARP1-221ENST00000597596 ZNF608Q9ULD9 1512 aaPredicted RBP10.98□□□□□ -0.65
FARP1-221ENST00000597596 TOPBP1Q92547 1522 aa10.97□□□□□ -0.65
FARP1-221ENST00000597596 IFT140Q96RY7 1462 aa10.94□□□□□ -0.66
FARP1-221ENST00000597596 FBLN2P98095 1184 aa10.94□□□□□ -0.66
FARP1-221ENST00000597596 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.66
FARP1-221ENST00000597596 ABCC8Q09428 1581 aa10.93□□□□□ -0.66
FARP1-221ENST00000597596 PRDM2Q13029 1718 aa10.91□□□□□ -0.66
FARP1-221ENST00000597596 RAD54L2Q9Y4B4 1467 aa10.9□□□□□ -0.66
FARP1-221ENST00000597596 SOGA1O94964 1423 aa10.9□□□□□ -0.66
FARP1-221ENST00000597596 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.67
FARP1-221ENST00000597596 DNMBPQ6XZF7 1577 aa10.89□□□□□ -0.67
FARP1-221ENST00000597596 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
FARP1-221ENST00000597596 CYB5RLQ6IPT4 315 aa10.83□□□□□ -0.68
FARP1-221ENST00000597596 CHMP7Q8WUX9 453 aaPredicted RBP10.83□□□□□ -0.68
FARP1-221ENST00000597596 FGD5Q6ZNL6 1462 aa10.82□□□□□ -0.68
FARP1-221ENST00000597596 TARBP1Q13395 1621 aaKnown RBP10.82□□□□□ -0.68
FARP1-221ENST00000597596 CUX1P39880 1505 aa10.82□□□□□ -0.68
FARP1-221ENST00000597596 EIF4G3O43432 1585 aaKnown RBP10.8□□□□□ -0.68
FARP1-221ENST00000597596 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
FARP1-221ENST00000597596 RIMBP3CA6NJZ7 1639 aa10.74□□□□□ -0.69
FARP1-221ENST00000597596 RIMBP3BA6NNM3 1639 aa10.74□□□□□ -0.69
FARP1-221ENST00000597596 RIMBP3Q9UFD9 1639 aa10.74□□□□□ -0.69
FARP1-221ENST00000597596 ARHGEF11O15085 1522 aa10.74□□□□□ -0.69
FARP1-221ENST00000597596 GRIN2BQ13224 1484 aa10.72□□□□□ -0.69
FARP1-221ENST00000597596 CHD1O14646 1710 aa10.71□□□□□ -0.69
FARP1-221ENST00000597596 GAPVD1Q14C86 1478 aa10.71□□□□□ -0.69
FARP1-221ENST00000597596 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
FARP1-221ENST00000597596 WRNQ14191 1432 aaPredicted RBP eCLIP10.69□□□□□ -0.7
FARP1-221ENST00000597596 ABCA10Q8WWZ4 1543 aa10.67□□□□□ -0.7
FARP1-221ENST00000597596 MAGI1Q96QZ7 1491 aaPredicted RBP10.67□□□□□ -0.7
FARP1-221ENST00000597596 SYNJ2O15056 1496 aa10.66□□□□□ -0.7
FARP1-221ENST00000597596 ARAP1Q96P48 1450 aa10.65□□□□□ -0.7
FARP1-221ENST00000597596 SYNJ1O43426 1573 aa10.63□□□□□ -0.71
FARP1-221ENST00000597596 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
FARP1-221ENST00000597596 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
FARP1-221ENST00000597596 CLASP1Q7Z460 1538 aa10.6□□□□□ -0.71
FARP1-221ENST00000597596 ABCA5Q8WWZ7 1642 aa10.58□□□□□ -0.72
FARP1-221ENST00000597596 PBRM1Q86U86 1689 aa10.58□□□□□ -0.72
FARP1-221ENST00000597596 FHAD1B1AJZ9 1412 aa10.58□□□□□ -0.72
FARP1-221ENST00000597596 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
FARP1-221ENST00000597596 BIVM-ERCC5R4GMW8 1640 aa10.57□□□□□ -0.72
FARP1-221ENST00000597596 GRIN2AQ12879 1464 aa10.56□□□□□ -0.72
FARP1-221ENST00000597596 IGF1RP08069 1367 aa10.53□□□□□ -0.72
FARP1-221ENST00000597596 ERCC6L2Q5T890 1561 aa10.52□□□□□ -0.72
FARP1-221ENST00000597596 NUP160Q12769 1436 aa10.52□□□□□ -0.73
FARP1-221ENST00000597596 ERICH3Q5RHP9 1530 aa10.51□□□□□ -0.73
FARP1-221ENST00000597596 ADAMTS12P58397 1594 aa10.51□□□□□ -0.73
FARP1-221ENST00000597596 CEP170Q5SW79 1584 aa10.51□□□□□ -0.73
FARP1-221ENST00000597596 PRG4Q92954 1404 aaPredicted RBP10.5□□□□□ -0.73
FARP1-221ENST00000597596 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
FARP1-221ENST00000597596 KIF27Q86VH2 1401 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms