RNA–Protein interactions for RNA: ENST00000597365.1

PAF1-206, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-206ENST00000597365 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
PAF1-206ENST00000597365 KIAA0586Q9BVV6 1533 aa24.8■■□□□ 1.56
PAF1-206ENST00000597365 EEA1Q15075 1411 aa24.78■■□□□ 1.56
PAF1-206ENST00000597365 PRXQ9BXM0 1461 aa24.78■■□□□ 1.56
PAF1-206ENST00000597365 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
PAF1-206ENST00000597365 CSRNP3Q8WYN3 585 aa24.78■■□□□ 1.56
PAF1-206ENST00000597365 JPH4Q96JJ6 628 aa24.78■■□□□ 1.56
PAF1-206ENST00000597365 FAM9AQ8IZU1 332 aaPredicted RBP24.76■■□□□ 1.55
PAF1-206ENST00000597365 PRG4Q92954 1404 aaPredicted RBP24.74■■□□□ 1.55
PAF1-206ENST00000597365 IQGAP2Q13576 1575 aa24.68■■□□□ 1.54
PAF1-206ENST00000597365 CTTNBP2Q8WZ74 1663 aa24.64■■□□□ 1.53
PAF1-206ENST00000597365 KIF21BO75037 1637 aa24.56■■□□□ 1.52
PAF1-206ENST00000597365 UGGT2Q9NYU1 1516 aa24.55■■□□□ 1.52
PAF1-206ENST00000597365 CARMIL2Q6F5E8 1435 aa24.52■■□□□ 1.52
PAF1-206ENST00000597365 DISP1Q96F81 1524 aa24.51■■□□□ 1.51
PAF1-206ENST00000597365 KIAA0556O60303 1618 aa24.46■■□□□ 1.51
PAF1-206ENST00000597365 TNIKQ9UKE5 1360 aa24.46■■□□□ 1.51
PAF1-206ENST00000597365 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
PAF1-206ENST00000597365 TTBK1Q5TCY1 1321 aaPredicted RBP24.44■■□□□ 1.5
PAF1-206ENST00000597365 TRHP20396 242 aaPredicted RBP24.44■■□□□ 1.5
PAF1-206ENST00000597365 PTPRGP23470 1445 aa24.44■■□□□ 1.5
PAF1-206ENST00000597365 GOLGA3Q08378 1498 aa24.4■■□□□ 1.5
PAF1-206ENST00000597365 ADCY10Q96PN6 1610 aa24.36■■□□□ 1.49
PAF1-206ENST00000597365 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
PAF1-206ENST00000597365 RANGAP1P46060 587 aaPredicted RBP24.33■■□□□ 1.49
PAF1-206ENST00000597365 SAMD9Q5K651 1589 aa24.32■■□□□ 1.48
PAF1-206ENST00000597365 P3H3Q8IVL6 736 aa24.31■■□□□ 1.48
PAF1-206ENST00000597365 UACAQ9BZF9 1416 aa24.27■■□□□ 1.48
PAF1-206ENST00000597365 NPM1P06748 294 aaKnown RBP eCLIP24.25■■□□□ 1.47
PAF1-206ENST00000597365 UHRF1BP1LA0JNW5 1464 aa24.24■■□□□ 1.47
PAF1-206ENST00000597365 ABCC2Q92887 1545 aa24.23■■□□□ 1.47
PAF1-206ENST00000597365 PLB1Q6P1J6 1458 aa24.21■■□□□ 1.47
PAF1-206ENST00000597365 EFCAB5A4FU69 1503 aa24.19■■□□□ 1.46
PAF1-206ENST00000597365 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
PAF1-206ENST00000597365 ABCA8O94911 1581 aa24.18■■□□□ 1.46
PAF1-206ENST00000597365 MAPKBP1O60336 1514 aa24.16■■□□□ 1.46
PAF1-206ENST00000597365 KDM5BQ9UGL1 1544 aa24.13■■□□□ 1.45
PAF1-206ENST00000597365 ARHGAP35Q9NRY4 1499 aa24.12■■□□□ 1.45
PAF1-206ENST00000597365 ZCCHC11Q5TAX3 1644 aaKnown RBP24.11■■□□□ 1.45
PAF1-206ENST00000597365 KIF13AQ9H1H9 1805 aa24.09■■□□□ 1.45
PAF1-206ENST00000597365 RAPGEF6Q8TEU7 1601 aa24.08■■□□□ 1.45
PAF1-206ENST00000597365 ASXL2Q76L83 1435 aa24.06■■□□□ 1.44
PAF1-206ENST00000597365 ABCC10Q5T3U5 1492 aa24.06■■□□□ 1.44
PAF1-206ENST00000597365 DIP2BQ9P265 1576 aa24.03■■□□□ 1.44
PAF1-206ENST00000597365 ARID3CA6NKF2 412 aa24.02■■□□□ 1.44
PAF1-206ENST00000597365 FAM69CQ0P6D2 419 aa24.02■■□□□ 1.44
PAF1-206ENST00000597365 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
PAF1-206ENST00000597365 ATP10BO94823 1461 aa23.99■■□□□ 1.43
PAF1-206ENST00000597365 CLIP1P30622 1438 aa23.98■■□□□ 1.43
PAF1-206ENST00000597365 NUP153P49790 1475 aaKnown RBP23.98■■□□□ 1.43
PAF1-206ENST00000597365 FMN1Q68DA7 1419 aa23.96■■□□□ 1.43
PAF1-206ENST00000597365 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
PAF1-206ENST00000597365 WDR7Q9Y4E6 1490 aa23.94■■□□□ 1.42
PAF1-206ENST00000597365 EPRSP07814 1512 aaKnown RBP23.92■■□□□ 1.42
PAF1-206ENST00000597365 GLI2P10070 1586 aa23.91■■□□□ 1.42
PAF1-206ENST00000597365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
PAF1-206ENST00000597365 HNRNPUL2Q1KMD3 747 aaKnown RBP23.9■■□□□ 1.42
PAF1-206ENST00000597365 CEP162Q5TB80 1403 aa23.89■■□□□ 1.41
PAF1-206ENST00000597365 TSPOAP1O95153 1857 aa23.88■■□□□ 1.41
PAF1-206ENST00000597365 ATP1B4Q9UN42 357 aaPredicted RBP23.87■■□□□ 1.41
PAF1-206ENST00000597365 HECW1Q76N89 1606 aa23.87■■□□□ 1.41
PAF1-206ENST00000597365 KCNH8Q96L42 1107 aa23.85■■□□□ 1.41
PAF1-206ENST00000597365 CDK13Q14004 1512 aaKnown RBP23.84■■□□□ 1.41
PAF1-206ENST00000597365 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
PAF1-206ENST00000597365 MAP3K4Q9Y6R4 1608 aa23.81■■□□□ 1.4
PAF1-206ENST00000597365 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
PAF1-206ENST00000597365 PPRC1Q5VV67 1664 aaKnown RBP23.79■■□□□ 1.4
PAF1-206ENST00000597365 CASKIN1Q8WXD9 1431 aa23.79■■□□□ 1.4
PAF1-206ENST00000597365 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
PAF1-206ENST00000597365 CFAP43Q8NDM7 1665 aa23.75■■□□□ 1.39
PAF1-206ENST00000597365 FYCO1Q9BQS8 1478 aa23.74■■□□□ 1.39
PAF1-206ENST00000597365 ABCA9Q8IUA7 1624 aa23.71■■□□□ 1.39
PAF1-206ENST00000597365 CD109Q6YHK3 1445 aa23.71■■□□□ 1.39
PAF1-206ENST00000597365 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
PAF1-206ENST00000597365 MAGI3Q5TCQ9 1506 aa23.66■■□□□ 1.38
PAF1-206ENST00000597365 CDK11AQ9UQ88 783 aaPredicted RBP23.66■■□□□ 1.38
PAF1-206ENST00000597365 TEX14Q8IWB6 1497 aa23.66■■□□□ 1.38
PAF1-206ENST00000597365 KDM6BO15054 1643 aa23.63■■□□□ 1.37
PAF1-206ENST00000597365 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.63■■□□□ 1.37
PAF1-206ENST00000597365 TROQ12816 1431 aaPredicted RBP23.61■■□□□ 1.37
PAF1-206ENST00000597365 TTC37Q6PGP7 1564 aa23.61■■□□□ 1.37
PAF1-206ENST00000597365 KIF14Q15058 1648 aa23.59■■□□□ 1.37
PAF1-206ENST00000597365 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
PAF1-206ENST00000597365 COL17A1Q9UMD9 1497 aaPredicted RBP23.56■■□□□ 1.36
PAF1-206ENST00000597365 MYO5CQ9NQX4 1742 aa23.49■■□□□ 1.35
PAF1-206ENST00000597365 NEO1Q92859 1461 aa23.48■■□□□ 1.35
PAF1-206ENST00000597365 PLCH2O75038 1416 aa23.47■■□□□ 1.35
PAF1-206ENST00000597365 FANCAO15360 1455 aa23.46■■□□□ 1.35
PAF1-206ENST00000597365 MTUS2Q5JR59 1369 aa23.46■■□□□ 1.35
PAF1-206ENST00000597365 ARAP3Q8WWN8 1544 aa23.45■■□□□ 1.34
PAF1-206ENST00000597365 PHLDB1Q86UU1 1377 aa23.45■■□□□ 1.34
PAF1-206ENST00000597365 TIAM1Q13009 1591 aa23.44■■□□□ 1.34
PAF1-206ENST00000597365 CFAP74Q9C0B2 1584 aa23.44■■□□□ 1.34
PAF1-206ENST00000597365 EHBP1L1Q8N3D4 1523 aa23.43■■□□□ 1.34
PAF1-206ENST00000597365 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
PAF1-206ENST00000597365 CDC42BPBQ9Y5S2 1711 aa23.4■■□□□ 1.34
PAF1-206ENST00000597365 CDC42BPAQ5VT25 1732 aa23.39■■□□□ 1.34
PAF1-206ENST00000597365 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
PAF1-206ENST00000597365 PREX2Q70Z35 1606 aa23.38■■□□□ 1.33
PAF1-206ENST00000597365 EFCAB2Q5VUJ9 269 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms