RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
ZNF558-205ENST00000597304 BCL11AQ9H165 835 aa17.82■□□□□ 0.44
ZNF558-205ENST00000597304 LRRC9Q6ZRR7 1453 aa17.81■□□□□ 0.44
ZNF558-205ENST00000597304 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
ZNF558-205ENST00000597304 SIN3AQ96ST3 1273 aa17.8■□□□□ 0.44
ZNF558-205ENST00000597304 RBM19Q9Y4C8 960 aaKnown RBP17.8■□□□□ 0.44
ZNF558-205ENST00000597304 TIMELESSQ9UNS1 1208 aa17.8■□□□□ 0.44
ZNF558-205ENST00000597304 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
ZNF558-205ENST00000597304 PHLDB1Q86UU1 1377 aa17.77■□□□□ 0.44
ZNF558-205ENST00000597304 ANP32CO43423 234 aa17.77■□□□□ 0.43
ZNF558-205ENST00000597304 CFAP43Q8NDM7 1665 aa17.75■□□□□ 0.43
ZNF558-205ENST00000597304 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
ZNF558-205ENST00000597304 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
ZNF558-205ENST00000597304 CFTRP13569 1480 aa17.73■□□□□ 0.43
ZNF558-205ENST00000597304 NCAPD3P42695 1498 aa17.71■□□□□ 0.43
ZNF558-205ENST00000597304 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.42
ZNF558-205ENST00000597304 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
ZNF558-205ENST00000597304 IGF1RP08069 1367 aa17.69■□□□□ 0.42
ZNF558-205ENST00000597304 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
ZNF558-205ENST00000597304 PCF11O94913 1555 aaKnown RBP17.68■□□□□ 0.42
ZNF558-205ENST00000597304 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
ZNF558-205ENST00000597304 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
ZNF558-205ENST00000597304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.61■□□□□ 0.41
ZNF558-205ENST00000597304 FYCO1Q9BQS8 1478 aa17.58■□□□□ 0.4
ZNF558-205ENST00000597304 MSH5O43196 834 aa17.57■□□□□ 0.4
ZNF558-205ENST00000597304 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
ZNF558-205ENST00000597304 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
ZNF558-205ENST00000597304 CCDC18Q5T9S5 1454 aa17.55■□□□□ 0.4
ZNF558-205ENST00000597304 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
ZNF558-205ENST00000597304 P3H3Q8IVL6 736 aa17.54■□□□□ 0.4
ZNF558-205ENST00000597304 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
ZNF558-205ENST00000597304 HNRNPUQ00839 825 aaKnown RBP eCLIP17.53■□□□□ 0.4
ZNF558-205ENST00000597304 FHOD3Q2V2M9 1422 aa17.52■□□□□ 0.4
ZNF558-205ENST00000597304 UACAQ9BZF9 1416 aa17.52■□□□□ 0.4
ZNF558-205ENST00000597304 EFCAB5A4FU69 1503 aa17.52■□□□□ 0.4
ZNF558-205ENST00000597304 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.39
ZNF558-205ENST00000597304 FGD6Q6ZV73 1430 aa17.51■□□□□ 0.39
ZNF558-205ENST00000597304 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.392e-10■■■■■ 47.1
ZNF558-205ENST00000597304 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
ZNF558-205ENST00000597304 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
ZNF558-205ENST00000597304 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
ZNF558-205ENST00000597304 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
ZNF558-205ENST00000597304 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
ZNF558-205ENST00000597304 KDM5BQ9UGL1 1544 aa17.44■□□□□ 0.38
ZNF558-205ENST00000597304 CTTNBP2Q8WZ74 1663 aa17.43■□□□□ 0.38
ZNF558-205ENST00000597304 PTPRKQ15262 1439 aa17.42■□□□□ 0.38
ZNF558-205ENST00000597304 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
ZNF558-205ENST00000597304 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
ZNF558-205ENST00000597304 NAIPQ13075 1403 aa17.41■□□□□ 0.38
ZNF558-205ENST00000597304 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
ZNF558-205ENST00000597304 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
ZNF558-205ENST00000597304 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.37
ZNF558-205ENST00000597304 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
ZNF558-205ENST00000597304 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
ZNF558-205ENST00000597304 CUL7Q14999 1698 aa17.38■□□□□ 0.37
ZNF558-205ENST00000597304 NCOA2Q15596 1464 aa17.37■□□□□ 0.37
ZNF558-205ENST00000597304 HSPA5P11021 654 aaKnown RBP17.36■□□□□ 0.37
ZNF558-205ENST00000597304 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
ZNF558-205ENST00000597304 MYOM3Q5VTT5 1437 aa17.35■□□□□ 0.37
ZNF558-205ENST00000597304 CNTLNQ9NXG0 1405 aa17.35■□□□□ 0.37
ZNF558-205ENST00000597304 ABCA10Q8WWZ4 1543 aa17.34■□□□□ 0.37
ZNF558-205ENST00000597304 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.37
ZNF558-205ENST00000597304 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.37
ZNF558-205ENST00000597304 HECW1Q76N89 1606 aa17.32■□□□□ 0.36
ZNF558-205ENST00000597304 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
ZNF558-205ENST00000597304 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
ZNF558-205ENST00000597304 GCC2Q8IWJ2 1684 aa17.3■□□□□ 0.36
ZNF558-205ENST00000597304 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
ZNF558-205ENST00000597304 EHBP1L1Q8N3D4 1523 aa17.3■□□□□ 0.36
ZNF558-205ENST00000597304 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
ZNF558-205ENST00000597304 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
ZNF558-205ENST00000597304 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
ZNF558-205ENST00000597304 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
ZNF558-205ENST00000597304 ZBED9Q6R2W3 1325 aa17.27■□□□□ 0.36
ZNF558-205ENST00000597304 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
ZNF558-205ENST00000597304 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
ZNF558-205ENST00000597304 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
ZNF558-205ENST00000597304 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
ZNF558-205ENST00000597304 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
ZNF558-205ENST00000597304 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
ZNF558-205ENST00000597304 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
ZNF558-205ENST00000597304 DENND4BO75064 1496 aaPredicted RBP17.25■□□□□ 0.35
ZNF558-205ENST00000597304 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
ZNF558-205ENST00000597304 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
ZNF558-205ENST00000597304 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
ZNF558-205ENST00000597304 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
ZNF558-205ENST00000597304 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
ZNF558-205ENST00000597304 AKNAQ7Z591 1439 aa17.21■□□□□ 0.35
ZNF558-205ENST00000597304 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.34
ZNF558-205ENST00000597304 DEKP35659 375 aaKnown RBP17.2■□□□□ 0.34
ZNF558-205ENST00000597304 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
ZNF558-205ENST00000597304 POLR1AO95602 1720 aaPredicted RBP17.2■□□□□ 0.34
ZNF558-205ENST00000597304 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
ZNF558-205ENST00000597304 KDM6BO15054 1643 aa17.19■□□□□ 0.34
ZNF558-205ENST00000597304 C11orf95C9JLR9 678 aaPredicted RBP17.18■□□□□ 0.34
ZNF558-205ENST00000597304 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
ZNF558-205ENST00000597304 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
ZNF558-205ENST00000597304 MAGI3Q5TCQ9 1506 aa17.17■□□□□ 0.34
ZNF558-205ENST00000597304 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
ZNF558-205ENST00000597304 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms