RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
CCDC9-203ENST00000596938 KIAA0586Q9BVV6 1533 aa17.96■□□□□ 0.47
CCDC9-203ENST00000596938 CUL7Q14999 1698 aa17.95■□□□□ 0.46
CCDC9-203ENST00000596938 RUSC2Q8N2Y8 1516 aa17.89■□□□□ 0.45
CCDC9-203ENST00000596938 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
CCDC9-203ENST00000596938 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC9-203ENST00000596938 CARMIL2Q6F5E8 1435 aa17.78■□□□□ 0.44
CCDC9-203ENST00000596938 PTPRGP23470 1445 aa17.77■□□□□ 0.44
CCDC9-203ENST00000596938 TNIKQ9UKE5 1360 aa17.75■□□□□ 0.43
CCDC9-203ENST00000596938 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
CCDC9-203ENST00000596938 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
CCDC9-203ENST00000596938 PRXQ9BXM0 1461 aa17.73■□□□□ 0.43
CCDC9-203ENST00000596938 DISP1Q96F81 1524 aa17.68■□□□□ 0.42
CCDC9-203ENST00000596938 UGGT2Q9NYU1 1516 aa17.68■□□□□ 0.42
CCDC9-203ENST00000596938 TTBK1Q5TCY1 1321 aaPredicted RBP17.67■□□□□ 0.42
CCDC9-203ENST00000596938 EEA1Q15075 1411 aa17.65■□□□□ 0.42
CCDC9-203ENST00000596938 ADCY10Q96PN6 1610 aa17.65■□□□□ 0.42
CCDC9-203ENST00000596938 FAM69CQ0P6D2 419 aa17.63■□□□□ 0.41
CCDC9-203ENST00000596938 MAPKBP1O60336 1514 aa17.62■□□□□ 0.41
CCDC9-203ENST00000596938 ABCC10Q5T3U5 1492 aa17.62■□□□□ 0.41
CCDC9-203ENST00000596938 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
CCDC9-203ENST00000596938 UACAQ9BZF9 1416 aa17.61■□□□□ 0.41
CCDC9-203ENST00000596938 UHRF1BP1LA0JNW5 1464 aa17.61■□□□□ 0.41
CCDC9-203ENST00000596938 ABCC2Q92887 1545 aa17.59■□□□□ 0.41
CCDC9-203ENST00000596938 GOLGA3Q08378 1498 aa17.58■□□□□ 0.41
CCDC9-203ENST00000596938 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
CCDC9-203ENST00000596938 FAM9AQ8IZU1 332 aaPredicted RBP17.55■□□□□ 0.4
CCDC9-203ENST00000596938 PLB1Q6P1J6 1458 aa17.51■□□□□ 0.39
CCDC9-203ENST00000596938 CTTNBP2Q8WZ74 1663 aa17.51■□□□□ 0.39
CCDC9-203ENST00000596938 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
CCDC9-203ENST00000596938 ASXL2Q76L83 1435 aa17.5■□□□□ 0.39
CCDC9-203ENST00000596938 DIP2BQ9P265 1576 aa17.49■□□□□ 0.39
CCDC9-203ENST00000596938 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
CCDC9-203ENST00000596938 P3H3Q8IVL6 736 aa17.47■□□□□ 0.39
CCDC9-203ENST00000596938 ABCA8O94911 1581 aa17.41■□□□□ 0.38
CCDC9-203ENST00000596938 GLI2P10070 1586 aa17.4■□□□□ 0.38
CCDC9-203ENST00000596938 EPRSP07814 1512 aaKnown RBP17.39■□□□□ 0.37
CCDC9-203ENST00000596938 KIF21BO75037 1637 aa17.39■□□□□ 0.37
CCDC9-203ENST00000596938 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
CCDC9-203ENST00000596938 ZCCHC11Q5TAX3 1644 aaKnown RBP17.37■□□□□ 0.37
CCDC9-203ENST00000596938 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
CCDC9-203ENST00000596938 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
CCDC9-203ENST00000596938 SAMD9Q5K651 1589 aa17.36■□□□□ 0.37
CCDC9-203ENST00000596938 ATP10BO94823 1461 aa17.34■□□□□ 0.37
CCDC9-203ENST00000596938 KCNH8Q96L42 1107 aa17.34■□□□□ 0.37
CCDC9-203ENST00000596938 ARID3CA6NKF2 412 aa17.31■□□□□ 0.36
CCDC9-203ENST00000596938 EHMT2Q96KQ7 1210 aa17.31■□□□□ 0.36
CCDC9-203ENST00000596938 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
CCDC9-203ENST00000596938 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
CCDC9-203ENST00000596938 TEX14Q8IWB6 1497 aa17.27■□□□□ 0.36
CCDC9-203ENST00000596938 CD109Q6YHK3 1445 aa17.27■□□□□ 0.35
CCDC9-203ENST00000596938 KDM6BO15054 1643 aa17.26■□□□□ 0.35
CCDC9-203ENST00000596938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
CCDC9-203ENST00000596938 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
CCDC9-203ENST00000596938 TSPOAP1O95153 1857 aa17.26■□□□□ 0.35
CCDC9-203ENST00000596938 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
CCDC9-203ENST00000596938 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
CCDC9-203ENST00000596938 RAPGEF6Q8TEU7 1601 aa17.24■□□□□ 0.35
CCDC9-203ENST00000596938 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
CCDC9-203ENST00000596938 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
CCDC9-203ENST00000596938 PPRC1Q5VV67 1664 aaKnown RBP17.23■□□□□ 0.35
CCDC9-203ENST00000596938 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
CCDC9-203ENST00000596938 COL17A1Q9UMD9 1497 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-203ENST00000596938 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
CCDC9-203ENST00000596938 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
CCDC9-203ENST00000596938 CFAP43Q8NDM7 1665 aa17.16■□□□□ 0.34
CCDC9-203ENST00000596938 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
CCDC9-203ENST00000596938 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
CCDC9-203ENST00000596938 ABCA9Q8IUA7 1624 aa17.11■□□□□ 0.33
CCDC9-203ENST00000596938 KDM4FA0A1W2PPD8 638 aa17.11■□□□□ 0.33
CCDC9-203ENST00000596938 CDK11AQ9UQ88 783 aaPredicted RBP17.1■□□□□ 0.33
CCDC9-203ENST00000596938 ARAP3Q8WWN8 1544 aa17.1■□□□□ 0.33
CCDC9-203ENST00000596938 NEO1Q92859 1461 aa17.06■□□□□ 0.32
CCDC9-203ENST00000596938 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
CCDC9-203ENST00000596938 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
CCDC9-203ENST00000596938 HECW1Q76N89 1606 aa17.02■□□□□ 0.31
CCDC9-203ENST00000596938 CLIP1P30622 1438 aa17.02■□□□□ 0.31
CCDC9-203ENST00000596938 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.31
CCDC9-203ENST00000596938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.01■□□□□ 0.313e-6■□□□□ 8.9
CCDC9-203ENST00000596938 PLCH2O75038 1416 aa16.99■□□□□ 0.31
CCDC9-203ENST00000596938 AKNAQ7Z591 1439 aa16.98■□□□□ 0.31
CCDC9-203ENST00000596938 FANCAO15360 1455 aa16.98■□□□□ 0.31
CCDC9-203ENST00000596938 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
CCDC9-203ENST00000596938 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
CCDC9-203ENST00000596938 ADGRL1O94910 1474 aa16.95■□□□□ 0.3
CCDC9-203ENST00000596938 DENND4BO75064 1496 aaPredicted RBP16.94■□□□□ 0.3
CCDC9-203ENST00000596938 CCDC18Q5T9S5 1454 aa16.94■□□□□ 0.3
CCDC9-203ENST00000596938 TTC37Q6PGP7 1564 aa16.93■□□□□ 0.3
CCDC9-203ENST00000596938 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
CCDC9-203ENST00000596938 SCAPERQ9BY12 1400 aa16.89■□□□□ 0.29
CCDC9-203ENST00000596938 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
CCDC9-203ENST00000596938 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.29
CCDC9-203ENST00000596938 CFAP74Q9C0B2 1584 aa16.89■□□□□ 0.29
CCDC9-203ENST00000596938 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
CCDC9-203ENST00000596938 KIF14Q15058 1648 aa16.87■□□□□ 0.29
CCDC9-203ENST00000596938 FRMPD1Q5SYB0 1578 aa16.86■□□□□ 0.29
CCDC9-203ENST00000596938 MAGI2Q86UL8 1455 aa16.85■□□□□ 0.29
CCDC9-203ENST00000596938 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
CCDC9-203ENST00000596938 POGZQ7Z3K3 1410 aa16.83■□□□□ 0.28
CCDC9-203ENST00000596938 ARID4BQ4LE39 1312 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms