RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.72
CCDC9-203ENST00000596938 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
CCDC9-203ENST00000596938 ABCC9O60706 1549 aa22.75■■□□□ 1.23
CCDC9-203ENST00000596938 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
CCDC9-203ENST00000596938 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
CCDC9-203ENST00000596938 NACADO15069 1562 aa21.72■■□□□ 1.07
CCDC9-203ENST00000596938 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
CCDC9-203ENST00000596938 ZCCHC6Q5VYS8 1495 aaKnown RBP21.44■■□□□ 1.02
CCDC9-203ENST00000596938 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
CCDC9-203ENST00000596938 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
CCDC9-203ENST00000596938 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
CCDC9-203ENST00000596938 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
CCDC9-203ENST00000596938 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
CCDC9-203ENST00000596938 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
CCDC9-203ENST00000596938 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
CCDC9-203ENST00000596938 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
CCDC9-203ENST00000596938 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
CCDC9-203ENST00000596938 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
CCDC9-203ENST00000596938 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
CCDC9-203ENST00000596938 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
CCDC9-203ENST00000596938 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
CCDC9-203ENST00000596938 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
CCDC9-203ENST00000596938 SMARCA2P51531 1590 aa19.98■□□□□ 0.79
CCDC9-203ENST00000596938 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
CCDC9-203ENST00000596938 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
CCDC9-203ENST00000596938 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
CCDC9-203ENST00000596938 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
CCDC9-203ENST00000596938 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
CCDC9-203ENST00000596938 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
CCDC9-203ENST00000596938 NESP48681 1621 aa19.62■□□□□ 0.73
CCDC9-203ENST00000596938 WIZO95785 1651 aa19.59■□□□□ 0.73
CCDC9-203ENST00000596938 CUX2O14529 1486 aa19.54■□□□□ 0.72
CCDC9-203ENST00000596938 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
CCDC9-203ENST00000596938 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
CCDC9-203ENST00000596938 PDS5BQ9NTI5 1447 aa19.49■□□□□ 0.71
CCDC9-203ENST00000596938 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
CCDC9-203ENST00000596938 CFTRP13569 1480 aa19.33■□□□□ 0.68
CCDC9-203ENST00000596938 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
CCDC9-203ENST00000596938 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
CCDC9-203ENST00000596938 KIF21AQ7Z4S6 1674 aa19.26■□□□□ 0.67
CCDC9-203ENST00000596938 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
CCDC9-203ENST00000596938 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
CCDC9-203ENST00000596938 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
CCDC9-203ENST00000596938 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
CCDC9-203ENST00000596938 WDR62O43379 1518 aa19.16■□□□□ 0.66
CCDC9-203ENST00000596938 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
CCDC9-203ENST00000596938 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
CCDC9-203ENST00000596938 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
CCDC9-203ENST00000596938 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
CCDC9-203ENST00000596938 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
CCDC9-203ENST00000596938 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
CCDC9-203ENST00000596938 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
CCDC9-203ENST00000596938 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
CCDC9-203ENST00000596938 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
CCDC9-203ENST00000596938 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
CCDC9-203ENST00000596938 SOGA1O94964 1423 aa18.7■□□□□ 0.58
CCDC9-203ENST00000596938 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
CCDC9-203ENST00000596938 AQRO60306 1485 aaKnown RBP eCLIP18.66■□□□□ 0.581e-7■■■■□ 21.1
CCDC9-203ENST00000596938 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
CCDC9-203ENST00000596938 CUX1P39880 1505 aa18.65■□□□□ 0.58
CCDC9-203ENST00000596938 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
CCDC9-203ENST00000596938 TDRD9Q8NDG6 1382 aaKnown RBP18.61■□□□□ 0.57
CCDC9-203ENST00000596938 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
CCDC9-203ENST00000596938 WDR97A6NE52 1622 aa18.52■□□□□ 0.55
CCDC9-203ENST00000596938 FBLN2P98095 1184 aa18.51■□□□□ 0.55
CCDC9-203ENST00000596938 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
CCDC9-203ENST00000596938 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
CCDC9-203ENST00000596938 GRIN2BQ13224 1484 aa18.47■□□□□ 0.55
CCDC9-203ENST00000596938 ABCA10Q8WWZ4 1543 aa18.47■□□□□ 0.55
CCDC9-203ENST00000596938 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
CCDC9-203ENST00000596938 GAPVD1Q14C86 1478 aa18.45■□□□□ 0.54
CCDC9-203ENST00000596938 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
CCDC9-203ENST00000596938 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
CCDC9-203ENST00000596938 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
CCDC9-203ENST00000596938 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
CCDC9-203ENST00000596938 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
CCDC9-203ENST00000596938 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
CCDC9-203ENST00000596938 CHD1O14646 1710 aa18.35■□□□□ 0.53
CCDC9-203ENST00000596938 ARHGEF11O15085 1522 aa18.34■□□□□ 0.53
CCDC9-203ENST00000596938 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
CCDC9-203ENST00000596938 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
CCDC9-203ENST00000596938 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
CCDC9-203ENST00000596938 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
CCDC9-203ENST00000596938 CYB5RLQ6IPT4 315 aa18.29■□□□□ 0.52
CCDC9-203ENST00000596938 CLASP1Q7Z460 1538 aa18.26■□□□□ 0.51
CCDC9-203ENST00000596938 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
CCDC9-203ENST00000596938 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
CCDC9-203ENST00000596938 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
CCDC9-203ENST00000596938 GRIN2AQ12879 1464 aa18.21■□□□□ 0.51
CCDC9-203ENST00000596938 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
CCDC9-203ENST00000596938 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
CCDC9-203ENST00000596938 NUP160Q12769 1436 aa18.16■□□□□ 0.5
CCDC9-203ENST00000596938 IGF1RP08069 1367 aa18.16■□□□□ 0.5
CCDC9-203ENST00000596938 KIF27Q86VH2 1401 aa18.15■□□□□ 0.5
CCDC9-203ENST00000596938 CEP170Q5SW79 1584 aa18.08■□□□□ 0.49
CCDC9-203ENST00000596938 JPH4Q96JJ6 628 aa18.06■□□□□ 0.48
CCDC9-203ENST00000596938 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
CCDC9-203ENST00000596938 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
CCDC9-203ENST00000596938 SHROOM2Q13796 1616 aa17.98■□□□□ 0.47
CCDC9-203ENST00000596938 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms