RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 KIAA0586Q9BVV6 1533 aa14.23□□□□□ -0.13
SNRPA-202ENST00000596860 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
SNRPA-202ENST00000596860 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
SNRPA-202ENST00000596860 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
SNRPA-202ENST00000596860 CEP170Q5SW79 1584 aa14.21□□□□□ -0.14
SNRPA-202ENST00000596860 IQGAP2Q13576 1575 aa14.19□□□□□ -0.14
SNRPA-202ENST00000596860 UBTFP17480 764 aaKnown RBP14.19□□□□□ -0.14
SNRPA-202ENST00000596860 CLASP1Q7Z460 1538 aa14.16□□□□□ -0.14
SNRPA-202ENST00000596860 FBLN2P98095 1184 aa14.16□□□□□ -0.14
SNRPA-202ENST00000596860 EFCAB5A4FU69 1503 aa14.15□□□□□ -0.14
SNRPA-202ENST00000596860 UGGT2Q9NYU1 1516 aa14.15□□□□□ -0.14
SNRPA-202ENST00000596860 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
SNRPA-202ENST00000596860 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
SNRPA-202ENST00000596860 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
SNRPA-202ENST00000596860 SAMD9Q5K651 1589 aa14.12□□□□□ -0.15
SNRPA-202ENST00000596860 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
SNRPA-202ENST00000596860 CLIP1P30622 1438 aa14.08□□□□□ -0.15
SNRPA-202ENST00000596860 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
SNRPA-202ENST00000596860 CARMIL2Q6F5E8 1435 aa14.06□□□□□ -0.16
SNRPA-202ENST00000596860 ARHGAP35Q9NRY4 1499 aa14.05□□□□□ -0.16
SNRPA-202ENST00000596860 KIAA0556O60303 1618 aa14.04□□□□□ -0.16
SNRPA-202ENST00000596860 DISP1Q96F81 1524 aa14.04□□□□□ -0.16
SNRPA-202ENST00000596860 EHMT2Q96KQ7 1210 aa14.02□□□□□ -0.17
SNRPA-202ENST00000596860 PRG4Q92954 1404 aaPredicted RBP14□□□□□ -0.17
SNRPA-202ENST00000596860 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
SNRPA-202ENST00000596860 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
SNRPA-202ENST00000596860 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
SNRPA-202ENST00000596860 VPS8Q8N3P4 1428 aa13.96□□□□□ -0.18
SNRPA-202ENST00000596860 FHOD3Q2V2M9 1422 aa13.93□□□□□ -0.18
SNRPA-202ENST00000596860 CASKIN1Q8WXD9 1431 aa13.9□□□□□ -0.18
SNRPA-202ENST00000596860 FYCO1Q9BQS8 1478 aa13.9□□□□□ -0.18
SNRPA-202ENST00000596860 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
SNRPA-202ENST00000596860 PTPRGP23470 1445 aa13.9□□□□□ -0.19
SNRPA-202ENST00000596860 ABCA8O94911 1581 aa13.88□□□□□ -0.19
SNRPA-202ENST00000596860 MAP3K1Q13233 1512 aa13.88□□□□□ -0.19
SNRPA-202ENST00000596860 UHRF1BP1LA0JNW5 1464 aa13.87□□□□□ -0.19
SNRPA-202ENST00000596860 RAPGEF6Q8TEU7 1601 aa13.87□□□□□ -0.19
SNRPA-202ENST00000596860 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
SNRPA-202ENST00000596860 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
SNRPA-202ENST00000596860 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
SNRPA-202ENST00000596860 P3H3Q8IVL6 736 aa13.85□□□□□ -0.19
SNRPA-202ENST00000596860 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
SNRPA-202ENST00000596860 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
SNRPA-202ENST00000596860 CCDC18Q5T9S5 1454 aa13.84□□□□□ -0.19
SNRPA-202ENST00000596860 ABCC2Q92887 1545 aa13.84□□□□□ -0.19
SNRPA-202ENST00000596860 CFAP43Q8NDM7 1665 aa13.8□□□□□ -0.2
SNRPA-202ENST00000596860 NUP153P49790 1475 aaKnown RBP13.8□□□□□ -0.2
SNRPA-202ENST00000596860 PLB1Q6P1J6 1458 aa13.8□□□□□ -0.2
SNRPA-202ENST00000596860 EPRSP07814 1512 aaKnown RBP13.78□□□□□ -0.2
SNRPA-202ENST00000596860 KDM5BQ9UGL1 1544 aa13.78□□□□□ -0.2
SNRPA-202ENST00000596860 TIAM1Q13009 1591 aa13.77□□□□□ -0.21
SNRPA-202ENST00000596860 LRRIQ1Q96JM4 1722 aa13.77□□□□□ -0.21
SNRPA-202ENST00000596860 ADCY10Q96PN6 1610 aa13.76□□□□□ -0.21
SNRPA-202ENST00000596860 APLP2Q06481 763 aa13.75□□□□□ -0.21
SNRPA-202ENST00000596860 ATP10BO94823 1461 aa13.73□□□□□ -0.21
SNRPA-202ENST00000596860 CDK11AQ9UQ88 783 aaPredicted RBP13.72□□□□□ -0.21
SNRPA-202ENST00000596860 ZCCHC11Q5TAX3 1644 aaKnown RBP13.71□□□□□ -0.22
SNRPA-202ENST00000596860 EHBP1L1Q8N3D4 1523 aa13.7□□□□□ -0.22
SNRPA-202ENST00000596860 LRRC9Q6ZRR7 1453 aa13.69□□□□□ -0.22
SNRPA-202ENST00000596860 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
SNRPA-202ENST00000596860 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
SNRPA-202ENST00000596860 TTBK1Q5TCY1 1321 aaPredicted RBP13.67□□□□□ -0.22
SNRPA-202ENST00000596860 TROQ12816 1431 aaPredicted RBP13.66□□□□□ -0.22
SNRPA-202ENST00000596860 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
SNRPA-202ENST00000596860 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNRPA-202ENST00000596860 ATP1B4Q9UN42 357 aaPredicted RBP13.65□□□□□ -0.22
SNRPA-202ENST00000596860 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
SNRPA-202ENST00000596860 PLEKHD1A6NEE1 506 aa13.64□□□□□ -0.23
SNRPA-202ENST00000596860 MAGI3Q5TCQ9 1506 aa13.63□□□□□ -0.23
SNRPA-202ENST00000596860 WDR7Q9Y4E6 1490 aa13.62□□□□□ -0.23
SNRPA-202ENST00000596860 KIF14Q15058 1648 aa13.61□□□□□ -0.23
SNRPA-202ENST00000596860 ASXL2Q76L83 1435 aa13.59□□□□□ -0.23
SNRPA-202ENST00000596860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
SNRPA-202ENST00000596860 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
SNRPA-202ENST00000596860 KANK4Q5T7N3 995 aaPredicted RBP13.59□□□□□ -0.23
SNRPA-202ENST00000596860 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
SNRPA-202ENST00000596860 NCOA2Q15596 1464 aa13.57□□□□□ -0.24
SNRPA-202ENST00000596860 GLI2P10070 1586 aa13.57□□□□□ -0.24
SNRPA-202ENST00000596860 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
SNRPA-202ENST00000596860 ABCC10Q5T3U5 1492 aa13.56□□□□□ -0.24
SNRPA-202ENST00000596860 ARAP3Q8WWN8 1544 aa13.56□□□□□ -0.24
SNRPA-202ENST00000596860 ABCA9Q8IUA7 1624 aa13.55□□□□□ -0.24
SNRPA-202ENST00000596860 MIA2Q96PC5 1412 aa13.54□□□□□ -0.24
SNRPA-202ENST00000596860 ARID3CA6NKF2 412 aa13.53□□□□□ -0.24
SNRPA-202ENST00000596860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNRPA-202ENST00000596860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNRPA-202ENST00000596860 MYOM3Q5VTT5 1437 aa13.52□□□□□ -0.25
SNRPA-202ENST00000596860 MYO5CQ9NQX4 1742 aa13.52□□□□□ -0.25
SNRPA-202ENST00000596860 CDC42BPAQ5VT25 1732 aa13.51□□□□□ -0.25
SNRPA-202ENST00000596860 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
SNRPA-202ENST00000596860 DIP2BQ9P265 1576 aa13.5□□□□□ -0.25
SNRPA-202ENST00000596860 RRBP1Q9P2E9 1410 aaKnown RBP13.5□□□□□ -0.25
SNRPA-202ENST00000596860 CCNB3Q8WWL7 1395 aa13.5□□□□□ -0.25
SNRPA-202ENST00000596860 TTC37Q6PGP7 1564 aa13.49□□□□□ -0.25
SNRPA-202ENST00000596860 GPATCH8Q9UKJ3 1502 aaKnown RBP13.49□□□□□ -0.25
SNRPA-202ENST00000596860 PHLDB1Q86UU1 1377 aa13.48□□□□□ -0.25
SNRPA-202ENST00000596860 MAP3K4Q9Y6R4 1608 aa13.48□□□□□ -0.25
SNRPA-202ENST00000596860 PLCH2O75038 1416 aa13.47□□□□□ -0.25
SNRPA-202ENST00000596860 FGD6Q6ZV73 1430 aa13.47□□□□□ -0.25
SNRPA-202ENST00000596860 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms