RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 KIAA0586Q9BVV6 1533 aa35.73■■■■□ 3.31
PNKP-209ENST00000596726 JPH4Q96JJ6 628 aa35.73■■■■□ 3.31
PNKP-209ENST00000596726 RAPGEF2Q9Y4G8 1499 aa35.67■■■■□ 3.3
PNKP-209ENST00000596726 PRG4Q92954 1404 aaPredicted RBP35.66■■■■□ 3.3
PNKP-209ENST00000596726 PRXQ9BXM0 1461 aa35.53■■■■□ 3.28
PNKP-209ENST00000596726 CHIC1Q5VXU3 224 aa35.51■■■■□ 3.28
PNKP-209ENST00000596726 IQGAP2Q13576 1575 aa35.5■■■■□ 3.27
PNKP-209ENST00000596726 EEA1Q15075 1411 aa35.45■■■■□ 3.27
PNKP-209ENST00000596726 CSRNP3Q8WYN3 585 aa35.43■■■■□ 3.26
PNKP-209ENST00000596726 CTTNBP2Q8WZ74 1663 aa35.36■■■■□ 3.25
PNKP-209ENST00000596726 UGGT2Q9NYU1 1516 aa35.32■■■■□ 3.25
PNKP-209ENST00000596726 CARMIL2Q6F5E8 1435 aa35.32■■■■□ 3.24
PNKP-209ENST00000596726 DISP1Q96F81 1524 aa35.28■■■■□ 3.24
PNKP-209ENST00000596726 TNIKQ9UKE5 1360 aa35.24■■■■□ 3.23
PNKP-209ENST00000596726 FAM9AQ8IZU1 332 aaPredicted RBP35.22■■■■□ 3.23
PNKP-209ENST00000596726 PTPRGP23470 1445 aa35.22■■■■□ 3.23
PNKP-209ENST00000596726 TRHP20396 242 aaPredicted RBP35.2■■■■□ 3.23
PNKP-209ENST00000596726 ADCY10Q96PN6 1610 aa35.17■■■■□ 3.22
PNKP-209ENST00000596726 KIAA0556O60303 1618 aa35.17■■■■□ 3.22
PNKP-209ENST00000596726 KIF21BO75037 1637 aa35.11■■■■□ 3.21
PNKP-209ENST00000596726 GOLGA3Q08378 1498 aa35.08■■■■□ 3.21
PNKP-209ENST00000596726 TTBK1Q5TCY1 1321 aaPredicted RBP35.06■■■■□ 3.2
PNKP-209ENST00000596726 NPM1P06748 294 aaKnown RBP eCLIP35.03■■■■□ 3.2
PNKP-209ENST00000596726 UHRF1BP1LA0JNW5 1464 aa35■■■■□ 3.19
PNKP-209ENST00000596726 UACAQ9BZF9 1416 aa34.98■■■■□ 3.19
PNKP-209ENST00000596726 MAPKBP1O60336 1514 aa34.98■■■■□ 3.19
PNKP-209ENST00000596726 ABCC2Q92887 1545 aa34.94■■■■□ 3.18
PNKP-209ENST00000596726 SAMD9Q5K651 1589 aa34.91■■■■□ 3.18
PNKP-209ENST00000596726 KIF13AQ9H1H9 1805 aa34.9■■■■□ 3.18
PNKP-209ENST00000596726 ABCC10Q5T3U5 1492 aa34.84■■■■□ 3.17
PNKP-209ENST00000596726 PLB1Q6P1J6 1458 aa34.83■■■■□ 3.17
PNKP-209ENST00000596726 KDM5BQ9UGL1 1544 aa34.82■■■■□ 3.16
PNKP-209ENST00000596726 ABCA8O94911 1581 aa34.82■■■■□ 3.16
PNKP-209ENST00000596726 P3H3Q8IVL6 736 aa34.8■■■■□ 3.16
PNKP-209ENST00000596726 DIP2BQ9P265 1576 aa34.78■■■■□ 3.16
PNKP-209ENST00000596726 UBTFP17480 764 aaKnown RBP34.75■■■■□ 3.15
PNKP-209ENST00000596726 ZCCHC11Q5TAX3 1644 aaKnown RBP34.74■■■■□ 3.15
PNKP-209ENST00000596726 EHMT2Q96KQ7 1210 aa34.74■■■■□ 3.15
PNKP-209ENST00000596726 FAM69CQ0P6D2 419 aa34.73■■■■□ 3.15
PNKP-209ENST00000596726 ASXL2Q76L83 1435 aa34.72■■■■□ 3.15
PNKP-209ENST00000596726 RANGAP1P46060 587 aaPredicted RBP34.71■■■■□ 3.15
PNKP-209ENST00000596726 EFCAB5A4FU69 1503 aa34.7■■■■□ 3.14
PNKP-209ENST00000596726 FHOD3Q2V2M9 1422 aa34.64■■■■□ 3.14
PNKP-209ENST00000596726 RAPGEF6Q8TEU7 1601 aa34.59■■■■□ 3.13
PNKP-209ENST00000596726 GLI2P10070 1586 aa34.58■■■■□ 3.13
PNKP-209ENST00000596726 EPRSP07814 1512 aaKnown RBP34.54■■■■□ 3.12
PNKP-209ENST00000596726 ATP10BO94823 1461 aa34.52■■■■□ 3.12
PNKP-209ENST00000596726 WDR7Q9Y4E6 1490 aa34.52■■■■□ 3.12
PNKP-209ENST00000596726 ARHGAP35Q9NRY4 1499 aa34.51■■■■□ 3.11
PNKP-209ENST00000596726 TSPOAP1O95153 1857 aa34.5■■■■□ 3.11
PNKP-209ENST00000596726 NUP153P49790 1475 aaKnown RBP34.46■■■■□ 3.11
PNKP-209ENST00000596726 ARID3CA6NKF2 412 aa34.42■■■■□ 3.1
PNKP-209ENST00000596726 MAP3K4Q9Y6R4 1608 aa34.41■■■■□ 3.1
PNKP-209ENST00000596726 PPRC1Q5VV67 1664 aaKnown RBP34.4■■■■□ 3.1
PNKP-209ENST00000596726 FMN1Q68DA7 1419 aa34.36■■■■□ 3.09
PNKP-209ENST00000596726 KCNH8Q96L42 1107 aa34.32■■■■□ 3.08
PNKP-209ENST00000596726 CFAP43Q8NDM7 1665 aa34.28■■■■□ 3.08
PNKP-209ENST00000596726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.26■■■■□ 3.08
PNKP-209ENST00000596726 HNRNPUL2Q1KMD3 747 aaKnown RBP34.26■■■■□ 3.08
PNKP-209ENST00000596726 KDM6BO15054 1643 aa34.24■■■■□ 3.07
PNKP-209ENST00000596726 HECW1Q76N89 1606 aa34.22■■■■□ 3.07
PNKP-209ENST00000596726 CLIP1P30622 1438 aa34.21■■■■□ 3.07
PNKP-209ENST00000596726 CD109Q6YHK3 1445 aa34.21■■■■□ 3.07
PNKP-209ENST00000596726 TEX14Q8IWB6 1497 aa34.21■■■■□ 3.07
PNKP-209ENST00000596726 MAGI3Q5TCQ9 1506 aa34.2■■■■□ 3.06
PNKP-209ENST00000596726 ABCA9Q8IUA7 1624 aa34.19■■■■□ 3.06
PNKP-209ENST00000596726 CDK13Q14004 1512 aaKnown RBP34.18■■■■□ 3.06
PNKP-209ENST00000596726 PLEKHD1A6NEE1 506 aa34.17■■■■□ 3.06
PNKP-209ENST00000596726 ATP1B4Q9UN42 357 aaPredicted RBP34.11■■■■□ 3.05
PNKP-209ENST00000596726 LRRIQ1Q96JM4 1722 aa34.1■■■■□ 3.05
PNKP-209ENST00000596726 CASKIN1Q8WXD9 1431 aa34.09■■■■□ 3.05
PNKP-209ENST00000596726 PCF11O94913 1555 aaKnown RBP34.08■■■■□ 3.05
PNKP-209ENST00000596726 COL17A1Q9UMD9 1497 aaPredicted RBP34.07■■■■□ 3.05
PNKP-209ENST00000596726 LOC105371045A0A1W2PR82 267 aa34.04■■■■□ 3.04
PNKP-209ENST00000596726 CEP162Q5TB80 1403 aa34.03■■■■□ 3.04
PNKP-209ENST00000596726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.99■■■■□ 3.03
PNKP-209ENST00000596726 FYCO1Q9BQS8 1478 aa33.99■■■■□ 3.03
PNKP-209ENST00000596726 CDK11AQ9UQ88 783 aaPredicted RBP33.98■■■■□ 3.03
PNKP-209ENST00000596726 CCDC18Q5T9S5 1454 aa33.95■■■■□ 3.03
PNKP-209ENST00000596726 TTC37Q6PGP7 1564 aa33.94■■■■□ 3.02
PNKP-209ENST00000596726 PHLDB1Q86UU1 1377 aa33.92■■■■□ 3.02
PNKP-209ENST00000596726 ARAP3Q8WWN8 1544 aa33.91■■■■□ 3.02
PNKP-209ENST00000596726 TROQ12816 1431 aaPredicted RBP33.91■■■■□ 3.02
PNKP-209ENST00000596726 NEO1Q92859 1461 aa33.9■■■■□ 3.02
PNKP-209ENST00000596726 KIF14Q15058 1648 aa33.86■■■■□ 3.01
PNKP-209ENST00000596726 PLCH2O75038 1416 aa33.79■■■■□ 3
PNKP-209ENST00000596726 CFAP74Q9C0B2 1584 aa33.78■■■■□ 3
PNKP-209ENST00000596726 FANCAO15360 1455 aa33.78■■■■□ 3
PNKP-209ENST00000596726 MYO5CQ9NQX4 1742 aa33.77■■■■□ 3
PNKP-209ENST00000596726 AKNAQ7Z591 1439 aa33.75■■■□□ 2.99
PNKP-209ENST00000596726 RAPGEF3O95398 923 aa33.68■■■□□ 2.98
PNKP-209ENST00000596726 FRMPD1Q5SYB0 1578 aa33.68■■■□□ 2.98
PNKP-209ENST00000596726 RICTORQ6R327 1708 aa33.65■■■□□ 2.98
PNKP-209ENST00000596726 DENND4BO75064 1496 aaPredicted RBP33.64■■■□□ 2.98
PNKP-209ENST00000596726 VPS8Q8N3P4 1428 aa33.64■■■□□ 2.98
PNKP-209ENST00000596726 CDC42BPBQ9Y5S2 1711 aa33.63■■■□□ 2.97
PNKP-209ENST00000596726 EFCAB2Q5VUJ9 269 aa33.63■■■□□ 2.97
PNKP-209ENST00000596726 ARHGAP5Q13017 1502 aa33.59■■■□□ 2.97
PNKP-209ENST00000596726 ADGRL1O94910 1474 aa33.59■■■□□ 2.97
PNKP-209ENST00000596726 PREX2Q70Z35 1606 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms