RNA–Protein interactions for RNA: ENST00000594019.5

ZC3H4-202, Transcript of zinc finger CCCH-type containing 4, humanhuman

TSL 2

Gene ZC3H4, Length 3,259 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-202ENST00000594019 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
ZC3H4-202ENST00000594019 DNMBPQ6XZF7 1577 aa16.76■□□□□ 0.27
ZC3H4-202ENST00000594019 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
ZC3H4-202ENST00000594019 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
ZC3H4-202ENST00000594019 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
ZC3H4-202ENST00000594019 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
ZC3H4-202ENST00000594019 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
ZC3H4-202ENST00000594019 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
ZC3H4-202ENST00000594019 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
ZC3H4-202ENST00000594019 MYT1Q01538 1121 aa16.65■□□□□ 0.26
ZC3H4-202ENST00000594019 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
ZC3H4-202ENST00000594019 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
ZC3H4-202ENST00000594019 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
ZC3H4-202ENST00000594019 PHLDB1Q86UU1 1377 aa16.6■□□□□ 0.25
ZC3H4-202ENST00000594019 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
ZC3H4-202ENST00000594019 CCNB3Q8WWL7 1395 aa16.59■□□□□ 0.25
ZC3H4-202ENST00000594019 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
ZC3H4-202ENST00000594019 MIER1Q8N108 512 aa16.56■□□□□ 0.24
ZC3H4-202ENST00000594019 PCF11O94913 1555 aaKnown RBP16.54■□□□□ 0.24
ZC3H4-202ENST00000594019 MTUS2Q5JR59 1369 aa16.54■□□□□ 0.24
ZC3H4-202ENST00000594019 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
ZC3H4-202ENST00000594019 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
ZC3H4-202ENST00000594019 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
ZC3H4-202ENST00000594019 RRP7BPQ9NSQ0 103 aa16.48■□□□□ 0.23
ZC3H4-202ENST00000594019 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
ZC3H4-202ENST00000594019 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
ZC3H4-202ENST00000594019 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
ZC3H4-202ENST00000594019 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
ZC3H4-202ENST00000594019 RAB3GAP2Q9H2M9 1393 aa16.47■□□□□ 0.23
ZC3H4-202ENST00000594019 ZNF777Q9ULD5 760 aaPredicted RBP16.44■□□□□ 0.22
ZC3H4-202ENST00000594019 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
ZC3H4-202ENST00000594019 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
ZC3H4-202ENST00000594019 SNAPC4Q5SXM2 1469 aa16.43■□□□□ 0.22
ZC3H4-202ENST00000594019 CUL7Q14999 1698 aa16.41■□□□□ 0.22
ZC3H4-202ENST00000594019 RRBP1Q9P2E9 1410 aaKnown RBP16.4■□□□□ 0.22
ZC3H4-202ENST00000594019 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
ZC3H4-202ENST00000594019 CTTNBP2Q8WZ74 1663 aa16.38■□□□□ 0.21
ZC3H4-202ENST00000594019 TRIM52Q96A61 297 aa16.38■□□□□ 0.21
ZC3H4-202ENST00000594019 FMN1Q68DA7 1419 aa16.38■□□□□ 0.21
ZC3H4-202ENST00000594019 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
ZC3H4-202ENST00000594019 CDK13Q14004 1512 aaKnown RBP16.37■□□□□ 0.21
ZC3H4-202ENST00000594019 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
ZC3H4-202ENST00000594019 FOXD1Q16676 465 aa16.36■□□□□ 0.21
ZC3H4-202ENST00000594019 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
ZC3H4-202ENST00000594019 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
ZC3H4-202ENST00000594019 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
ZC3H4-202ENST00000594019 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
ZC3H4-202ENST00000594019 FYCO1Q9BQS8 1478 aa16.31■□□□□ 0.2
ZC3H4-202ENST00000594019 SETD5Q9C0A6 1442 aa16.3■□□□□ 0.2
ZC3H4-202ENST00000594019 EIF4G3O43432 1585 aaKnown RBP16.29■□□□□ 0.2
ZC3H4-202ENST00000594019 IQGAP2Q13576 1575 aa16.27■□□□□ 0.2
ZC3H4-202ENST00000594019 EFCAB5A4FU69 1503 aa16.27■□□□□ 0.2
ZC3H4-202ENST00000594019 NCOA2Q15596 1464 aa16.27■□□□□ 0.2
ZC3H4-202ENST00000594019 PTPRKQ15262 1439 aa16.27■□□□□ 0.2
ZC3H4-202ENST00000594019 ADAMTS12P58397 1594 aa16.27■□□□□ 0.19
ZC3H4-202ENST00000594019 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
ZC3H4-202ENST00000594019 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
ZC3H4-202ENST00000594019 LRRIQ1Q96JM4 1722 aa16.25■□□□□ 0.19
ZC3H4-202ENST00000594019 WDR62O43379 1518 aa16.25■□□□□ 0.19
ZC3H4-202ENST00000594019 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
ZC3H4-202ENST00000594019 PLB1Q6P1J6 1458 aa16.23■□□□□ 0.19
ZC3H4-202ENST00000594019 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
ZC3H4-202ENST00000594019 KCNH8Q96L42 1107 aa16.21■□□□□ 0.19
ZC3H4-202ENST00000594019 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
ZC3H4-202ENST00000594019 THOC2Q8NI27 1593 aaKnown RBP16.2■□□□□ 0.18
ZC3H4-202ENST00000594019 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
ZC3H4-202ENST00000594019 SAMD9Q5K651 1589 aa16.19■□□□□ 0.18
ZC3H4-202ENST00000594019 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
ZC3H4-202ENST00000594019 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
ZC3H4-202ENST00000594019 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
ZC3H4-202ENST00000594019 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
ZC3H4-202ENST00000594019 DISP1Q96F81 1524 aa16.15■□□□□ 0.18
ZC3H4-202ENST00000594019 KIAA0586Q9BVV6 1533 aa16.14■□□□□ 0.18
ZC3H4-202ENST00000594019 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
ZC3H4-202ENST00000594019 MAPKBP1O60336 1514 aa16.14■□□□□ 0.17
ZC3H4-202ENST00000594019 MAP3K1Q13233 1512 aa16.13■□□□□ 0.17
ZC3H4-202ENST00000594019 CEP170Q5SW79 1584 aa16.13■□□□□ 0.17
ZC3H4-202ENST00000594019 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
ZC3H4-202ENST00000594019 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
ZC3H4-202ENST00000594019 CCDC18Q5T9S5 1454 aa16.12■□□□□ 0.17
ZC3H4-202ENST00000594019 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
ZC3H4-202ENST00000594019 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
ZC3H4-202ENST00000594019 NUP153P49790 1475 aaKnown RBP16.09■□□□□ 0.17
ZC3H4-202ENST00000594019 TONSLQ96HA7 1378 aa16.09■□□□□ 0.17
ZC3H4-202ENST00000594019 HNRNPMP52272 730 aaKnown RBP eCLIP16.09■□□□□ 0.178e-12■■■■■ 54.4
ZC3H4-202ENST00000594019 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.16
ZC3H4-202ENST00000594019 KIAA0556O60303 1618 aa16.07■□□□□ 0.16
ZC3H4-202ENST00000594019 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
ZC3H4-202ENST00000594019 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
ZC3H4-202ENST00000594019 PTPN23Q9H3S7 1636 aa16.06■□□□□ 0.16
ZC3H4-202ENST00000594019 NAIPQ13075 1403 aa16.05■□□□□ 0.16
ZC3H4-202ENST00000594019 EHBP1L1Q8N3D4 1523 aa16.05■□□□□ 0.16
ZC3H4-202ENST00000594019 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
ZC3H4-202ENST00000594019 MAGI1Q96QZ7 1491 aaPredicted RBP16.05■□□□□ 0.16
ZC3H4-202ENST00000594019 CARMIL2Q6F5E8 1435 aa16.04■□□□□ 0.16
ZC3H4-202ENST00000594019 BCANQ96GW7 911 aa16.03■□□□□ 0.16
ZC3H4-202ENST00000594019 MPHOSPH9Q99550 1183 aa16.03■□□□□ 0.16
ZC3H4-202ENST00000594019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.161e-7■■■□□ 16.3
ZC3H4-202ENST00000594019 UGGT2Q9NYU1 1516 aa16.03■□□□□ 0.16
ZC3H4-202ENST00000594019 KDM6BO15054 1643 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms