RNA–Protein interactions for RNA: ENST00000594019.5

ZC3H4-202, Transcript of zinc finger CCCH-type containing 4, humanhuman

TSL 2

Gene ZC3H4, Length 3,259 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-202ENST00000594019 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
ZC3H4-202ENST00000594019 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
ZC3H4-202ENST00000594019 SHROOM4Q9ULL8 1493 aa20.76■□□□□ 0.91
ZC3H4-202ENST00000594019 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
ZC3H4-202ENST00000594019 CCDC180Q9P1Z9 1646 aa19.97■□□□□ 0.79
ZC3H4-202ENST00000594019 ZCCHC6Q5VYS8 1495 aaKnown RBP19.88■□□□□ 0.77
ZC3H4-202ENST00000594019 ABCC9O60706 1549 aa19.65■□□□□ 0.74
ZC3H4-202ENST00000594019 SCRIBQ14160 1630 aa19.28■□□□□ 0.68
ZC3H4-202ENST00000594019 DCAF1Q9Y4B6 1507 aa19.03■□□□□ 0.64
ZC3H4-202ENST00000594019 CHIC1Q5VXU3 224 aa19.01■□□□□ 0.63
ZC3H4-202ENST00000594019 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
ZC3H4-202ENST00000594019 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
ZC3H4-202ENST00000594019 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
ZC3H4-202ENST00000594019 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
ZC3H4-202ENST00000594019 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
ZC3H4-202ENST00000594019 LOC105371045A0A1W2PR82 267 aa18.78■□□□□ 0.6
ZC3H4-202ENST00000594019 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
ZC3H4-202ENST00000594019 NACADO15069 1562 aa18.7■□□□□ 0.58
ZC3H4-202ENST00000594019 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
ZC3H4-202ENST00000594019 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
ZC3H4-202ENST00000594019 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
ZC3H4-202ENST00000594019 PCGF6Q9BYE7 350 aa18.52■□□□□ 0.55
ZC3H4-202ENST00000594019 WIZO95785 1651 aa18.47■□□□□ 0.55
ZC3H4-202ENST00000594019 UNC13AQ9UPW8 1703 aa18.34■□□□□ 0.53
ZC3H4-202ENST00000594019 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
ZC3H4-202ENST00000594019 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
ZC3H4-202ENST00000594019 BAZ1AQ9NRL2 1556 aaPredicted RBP18.18■□□□□ 0.5
ZC3H4-202ENST00000594019 HRCP23327 699 aa18.16■□□□□ 0.5
ZC3H4-202ENST00000594019 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.49
ZC3H4-202ENST00000594019 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
ZC3H4-202ENST00000594019 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
ZC3H4-202ENST00000594019 RANGAP1P46060 587 aaPredicted RBP18.08■□□□□ 0.48
ZC3H4-202ENST00000594019 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
ZC3H4-202ENST00000594019 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
ZC3H4-202ENST00000594019 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
ZC3H4-202ENST00000594019 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
ZC3H4-202ENST00000594019 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
ZC3H4-202ENST00000594019 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
ZC3H4-202ENST00000594019 SOGA1O94964 1423 aa17.84■□□□□ 0.45
ZC3H4-202ENST00000594019 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.44
ZC3H4-202ENST00000594019 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
ZC3H4-202ENST00000594019 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
ZC3H4-202ENST00000594019 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
ZC3H4-202ENST00000594019 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
ZC3H4-202ENST00000594019 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
ZC3H4-202ENST00000594019 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
ZC3H4-202ENST00000594019 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
ZC3H4-202ENST00000594019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
ZC3H4-202ENST00000594019 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
ZC3H4-202ENST00000594019 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
ZC3H4-202ENST00000594019 CCER1Q8TC90 406 aaPredicted RBP17.39■□□□□ 0.37
ZC3H4-202ENST00000594019 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
ZC3H4-202ENST00000594019 RAPGEF2Q9Y4G8 1499 aa17.34■□□□□ 0.37
ZC3H4-202ENST00000594019 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
ZC3H4-202ENST00000594019 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
ZC3H4-202ENST00000594019 NESP48681 1621 aa17.34■□□□□ 0.37
ZC3H4-202ENST00000594019 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
ZC3H4-202ENST00000594019 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
ZC3H4-202ENST00000594019 PELP1Q8IZL8 1130 aaKnown RBP17.3■□□□□ 0.36
ZC3H4-202ENST00000594019 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
ZC3H4-202ENST00000594019 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
ZC3H4-202ENST00000594019 APLP2Q06481 763 aa17.28■□□□□ 0.36
ZC3H4-202ENST00000594019 CUX1P39880 1505 aa17.26■□□□□ 0.35
ZC3H4-202ENST00000594019 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
ZC3H4-202ENST00000594019 CLIP1P30622 1438 aa17.24■□□□□ 0.35
ZC3H4-202ENST00000594019 CADPSQ9ULU8 1353 aa17.23■□□□□ 0.35
ZC3H4-202ENST00000594019 CFTRP13569 1480 aa17.22■□□□□ 0.35
ZC3H4-202ENST00000594019 ITGAEP38570 1179 aa17.2■□□□□ 0.34
ZC3H4-202ENST00000594019 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
ZC3H4-202ENST00000594019 EEA1Q15075 1411 aa17.2■□□□□ 0.34
ZC3H4-202ENST00000594019 CUX2O14529 1486 aa17.18■□□□□ 0.34
ZC3H4-202ENST00000594019 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
ZC3H4-202ENST00000594019 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
ZC3H4-202ENST00000594019 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
ZC3H4-202ENST00000594019 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
ZC3H4-202ENST00000594019 FGD5Q6ZNL6 1462 aa17.09■□□□□ 0.33
ZC3H4-202ENST00000594019 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
ZC3H4-202ENST00000594019 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
ZC3H4-202ENST00000594019 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
ZC3H4-202ENST00000594019 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
ZC3H4-202ENST00000594019 IGF1RP08069 1367 aa17.01■□□□□ 0.31
ZC3H4-202ENST00000594019 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
ZC3H4-202ENST00000594019 KIF21BO75037 1637 aa16.99■□□□□ 0.31
ZC3H4-202ENST00000594019 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
ZC3H4-202ENST00000594019 PRXQ9BXM0 1461 aa16.96■□□□□ 0.31
ZC3H4-202ENST00000594019 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
ZC3H4-202ENST00000594019 POLA1P09884 1462 aaPredicted RBP16.9■□□□□ 0.3
ZC3H4-202ENST00000594019 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
ZC3H4-202ENST00000594019 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
ZC3H4-202ENST00000594019 FBLN2P98095 1184 aa16.89■□□□□ 0.29
ZC3H4-202ENST00000594019 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
ZC3H4-202ENST00000594019 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
ZC3H4-202ENST00000594019 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
ZC3H4-202ENST00000594019 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
ZC3H4-202ENST00000594019 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.29
ZC3H4-202ENST00000594019 FHOD3Q2V2M9 1422 aa16.83■□□□□ 0.28
ZC3H4-202ENST00000594019 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■■□□ 18
ZC3H4-202ENST00000594019 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
ZC3H4-202ENST00000594019 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.27
ZC3H4-202ENST00000594019 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms