RNA–Protein interactions for RNA: ENST00000592561.5

PSMD8-208, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

TSL 2

Gene PSMD8, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-208ENST00000592561 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
PSMD8-208ENST00000592561 GRIN2AQ12879 1464 aa18.16■□□□□ 0.5
PSMD8-208ENST00000592561 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
PSMD8-208ENST00000592561 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
PSMD8-208ENST00000592561 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
PSMD8-208ENST00000592561 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
PSMD8-208ENST00000592561 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
PSMD8-208ENST00000592561 NUP160Q12769 1436 aa18.07■□□□□ 0.48
PSMD8-208ENST00000592561 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
PSMD8-208ENST00000592561 CYB5RLQ6IPT4 315 aa18.05■□□□□ 0.48
PSMD8-208ENST00000592561 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
PSMD8-208ENST00000592561 KIF21BO75037 1637 aa18.02■□□□□ 0.48
PSMD8-208ENST00000592561 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
PSMD8-208ENST00000592561 KIAA0586Q9BVV6 1533 aa17.97■□□□□ 0.47
PSMD8-208ENST00000592561 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
PSMD8-208ENST00000592561 CTTNBP2Q8WZ74 1663 aa17.9■□□□□ 0.46
PSMD8-208ENST00000592561 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
PSMD8-208ENST00000592561 IQGAP2Q13576 1575 aa17.9■□□□□ 0.46
PSMD8-208ENST00000592561 SHROOM2Q13796 1616 aa17.9■□□□□ 0.46
PSMD8-208ENST00000592561 JPH4Q96JJ6 628 aa17.88■□□□□ 0.45
PSMD8-208ENST00000592561 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
PSMD8-208ENST00000592561 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
PSMD8-208ENST00000592561 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
PSMD8-208ENST00000592561 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
PSMD8-208ENST00000592561 ERCC6L2Q5T890 1561 aa17.78■□□□□ 0.44
PSMD8-208ENST00000592561 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
PSMD8-208ENST00000592561 DISP1Q96F81 1524 aa17.76■□□□□ 0.43
PSMD8-208ENST00000592561 TNIKQ9UKE5 1360 aa17.76■□□□□ 0.43
PSMD8-208ENST00000592561 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
PSMD8-208ENST00000592561 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
PSMD8-208ENST00000592561 SAMD9Q5K651 1589 aa17.7■□□□□ 0.42
PSMD8-208ENST00000592561 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
PSMD8-208ENST00000592561 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
PSMD8-208ENST00000592561 PTPRGP23470 1445 aa17.64■□□□□ 0.42
PSMD8-208ENST00000592561 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
PSMD8-208ENST00000592561 P3H3Q8IVL6 736 aa17.62■□□□□ 0.41
PSMD8-208ENST00000592561 CLIP1P30622 1438 aa17.62■□□□□ 0.41
PSMD8-208ENST00000592561 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
PSMD8-208ENST00000592561 FHOD3Q2V2M9 1422 aa17.6■□□□□ 0.41
PSMD8-208ENST00000592561 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
PSMD8-208ENST00000592561 MSH5O43196 834 aa17.57■□□□□ 0.4
PSMD8-208ENST00000592561 UACAQ9BZF9 1416 aa17.54■□□□□ 0.4
PSMD8-208ENST00000592561 UHRF1BP1LA0JNW5 1464 aa17.52■□□□□ 0.4
PSMD8-208ENST00000592561 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.4
PSMD8-208ENST00000592561 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
PSMD8-208ENST00000592561 FMN1Q68DA7 1419 aa17.52■□□□□ 0.4
PSMD8-208ENST00000592561 ABCA8O94911 1581 aa17.52■□□□□ 0.39
PSMD8-208ENST00000592561 ADCY10Q96PN6 1610 aa17.51■□□□□ 0.39
PSMD8-208ENST00000592561 KCNA4P22459 653 aa17.51■□□□□ 0.39
PSMD8-208ENST00000592561 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
PSMD8-208ENST00000592561 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
PSMD8-208ENST00000592561 KDM5BQ9UGL1 1544 aa17.42■□□□□ 0.38
PSMD8-208ENST00000592561 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
PSMD8-208ENST00000592561 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
PSMD8-208ENST00000592561 CASKIN1Q8WXD9 1431 aa17.41■□□□□ 0.38
PSMD8-208ENST00000592561 HECW1Q76N89 1606 aa17.4■□□□□ 0.38
PSMD8-208ENST00000592561 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
PSMD8-208ENST00000592561 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
PSMD8-208ENST00000592561 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
PSMD8-208ENST00000592561 ZCCHC11Q5TAX3 1644 aaKnown RBP17.38■□□□□ 0.37
PSMD8-208ENST00000592561 ATP10BO94823 1461 aa17.37■□□□□ 0.37
PSMD8-208ENST00000592561 MAPKBP1O60336 1514 aa17.37■□□□□ 0.37
PSMD8-208ENST00000592561 ATP1B4Q9UN42 357 aaPredicted RBP17.35■□□□□ 0.37
PSMD8-208ENST00000592561 EPRSP07814 1512 aaKnown RBP17.35■□□□□ 0.37
PSMD8-208ENST00000592561 ARID3CA6NKF2 412 aa17.34■□□□□ 0.37
PSMD8-208ENST00000592561 CCDC18Q5T9S5 1454 aa17.31■□□□□ 0.36
PSMD8-208ENST00000592561 ASXL2Q76L83 1435 aa17.31■□□□□ 0.36
PSMD8-208ENST00000592561 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
PSMD8-208ENST00000592561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
PSMD8-208ENST00000592561 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
PSMD8-208ENST00000592561 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
PSMD8-208ENST00000592561 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
PSMD8-208ENST00000592561 WDR7Q9Y4E6 1490 aa17.28■□□□□ 0.36
PSMD8-208ENST00000592561 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
PSMD8-208ENST00000592561 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
PSMD8-208ENST00000592561 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
PSMD8-208ENST00000592561 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
PSMD8-208ENST00000592561 MAP3K1Q13233 1512 aa17.21■□□□□ 0.35
PSMD8-208ENST00000592561 DIP2BQ9P265 1576 aa17.21■□□□□ 0.35
PSMD8-208ENST00000592561 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
PSMD8-208ENST00000592561 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
PSMD8-208ENST00000592561 TROQ12816 1431 aaPredicted RBP17.2■□□□□ 0.34
PSMD8-208ENST00000592561 GLI2P10070 1586 aa17.19■□□□□ 0.34
PSMD8-208ENST00000592561 MAGI3Q5TCQ9 1506 aa17.18■□□□□ 0.34
PSMD8-208ENST00000592561 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
PSMD8-208ENST00000592561 KCNH8Q96L42 1107 aa17.18■□□□□ 0.34
PSMD8-208ENST00000592561 APLP2Q06481 763 aa17.16■□□□□ 0.34
PSMD8-208ENST00000592561 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
PSMD8-208ENST00000592561 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
PSMD8-208ENST00000592561 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
PSMD8-208ENST00000592561 EHBP1L1Q8N3D4 1523 aa17.14■□□□□ 0.33
PSMD8-208ENST00000592561 KIF14Q15058 1648 aa17.14■□□□□ 0.33
PSMD8-208ENST00000592561 LRRC9Q6ZRR7 1453 aa17.13■□□□□ 0.33
PSMD8-208ENST00000592561 ABCA9Q8IUA7 1624 aa17.13■□□□□ 0.33
PSMD8-208ENST00000592561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■■■□ 20
PSMD8-208ENST00000592561 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
PSMD8-208ENST00000592561 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
PSMD8-208ENST00000592561 KDM6BO15054 1643 aa17.09■□□□□ 0.33
PSMD8-208ENST00000592561 TTC37Q6PGP7 1564 aa17.08■□□□□ 0.32
PSMD8-208ENST00000592561 CD109Q6YHK3 1445 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms