RNA–Protein interactions for RNA: ENST00000592561.5

PSMD8-208, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

TSL 2

Gene PSMD8, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-208ENST00000592561 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
PSMD8-208ENST00000592561 AEBP2Q6ZN18 517 aaPredicted RBP24.46■■□□□ 1.51
PSMD8-208ENST00000592561 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
PSMD8-208ENST00000592561 CCDC180Q9P1Z9 1646 aa23.04■■□□□ 1.28
PSMD8-208ENST00000592561 ABCC9O60706 1549 aa22.38■■□□□ 1.17
PSMD8-208ENST00000592561 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.08
PSMD8-208ENST00000592561 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
PSMD8-208ENST00000592561 NACADO15069 1562 aa21.6■■□□□ 1.05
PSMD8-208ENST00000592561 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
PSMD8-208ENST00000592561 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
PSMD8-208ENST00000592561 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
PSMD8-208ENST00000592561 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
PSMD8-208ENST00000592561 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
PSMD8-208ENST00000592561 UNC13AQ9UPW8 1703 aa21.03■□□□□ 0.96
PSMD8-208ENST00000592561 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
PSMD8-208ENST00000592561 BICRAQ9NZM4 1560 aa20.88■□□□□ 0.93
PSMD8-208ENST00000592561 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
PSMD8-208ENST00000592561 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
PSMD8-208ENST00000592561 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
PSMD8-208ENST00000592561 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
PSMD8-208ENST00000592561 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
PSMD8-208ENST00000592561 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
PSMD8-208ENST00000592561 SMARCA4P51532 1647 aa20.15■□□□□ 0.82
PSMD8-208ENST00000592561 CC2D2AQ9P2K1 1620 aa20.14■□□□□ 0.81
PSMD8-208ENST00000592561 MROH2BQ7Z745 1585 aa20.07■□□□□ 0.8
PSMD8-208ENST00000592561 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
PSMD8-208ENST00000592561 PEG3Q9GZU2 1588 aa19.97■□□□□ 0.79
PSMD8-208ENST00000592561 ATAD2BQ9ULI0 1458 aa19.97■□□□□ 0.79
PSMD8-208ENST00000592561 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
PSMD8-208ENST00000592561 NCAPD3P42695 1498 aa19.93■□□□□ 0.78
PSMD8-208ENST00000592561 WIZO95785 1651 aa19.86■□□□□ 0.77
PSMD8-208ENST00000592561 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
PSMD8-208ENST00000592561 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
PSMD8-208ENST00000592561 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
PSMD8-208ENST00000592561 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
PSMD8-208ENST00000592561 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
PSMD8-208ENST00000592561 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
PSMD8-208ENST00000592561 DNAJC5Q9H3Z4 198 aa19.42■□□□□ 0.7
PSMD8-208ENST00000592561 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
PSMD8-208ENST00000592561 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
PSMD8-208ENST00000592561 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
PSMD8-208ENST00000592561 NESP48681 1621 aa19.33■□□□□ 0.69
PSMD8-208ENST00000592561 CFTRP13569 1480 aa19.31■□□□□ 0.68
PSMD8-208ENST00000592561 CUX2O14529 1486 aa19.24■□□□□ 0.67
PSMD8-208ENST00000592561 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
PSMD8-208ENST00000592561 FOXD1Q16676 465 aa19.19■□□□□ 0.66
PSMD8-208ENST00000592561 PRDM2Q13029 1718 aa19.16■□□□□ 0.66
PSMD8-208ENST00000592561 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
PSMD8-208ENST00000592561 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
PSMD8-208ENST00000592561 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
PSMD8-208ENST00000592561 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
PSMD8-208ENST00000592561 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
PSMD8-208ENST00000592561 WDR62O43379 1518 aa18.93■□□□□ 0.62
PSMD8-208ENST00000592561 URB2Q14146 1524 aaKnown RBP18.91■□□□□ 0.62
PSMD8-208ENST00000592561 ABCC8Q09428 1581 aa18.89■□□□□ 0.61
PSMD8-208ENST00000592561 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
PSMD8-208ENST00000592561 TOPBP1Q92547 1522 aa18.85■□□□□ 0.61
PSMD8-208ENST00000592561 CUX1P39880 1505 aa18.82■□□□□ 0.6
PSMD8-208ENST00000592561 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
PSMD8-208ENST00000592561 ADRA2BP18089 450 aa18.77■□□□□ 0.6
PSMD8-208ENST00000592561 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
PSMD8-208ENST00000592561 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
PSMD8-208ENST00000592561 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
PSMD8-208ENST00000592561 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
PSMD8-208ENST00000592561 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
PSMD8-208ENST00000592561 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
PSMD8-208ENST00000592561 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
PSMD8-208ENST00000592561 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
PSMD8-208ENST00000592561 SOGA1O94964 1423 aa18.64■□□□□ 0.57
PSMD8-208ENST00000592561 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
PSMD8-208ENST00000592561 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
PSMD8-208ENST00000592561 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
PSMD8-208ENST00000592561 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
PSMD8-208ENST00000592561 WDR97A6NE52 1622 aa18.53■□□□□ 0.56
PSMD8-208ENST00000592561 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
PSMD8-208ENST00000592561 EIF4G3O43432 1585 aaKnown RBP18.49■□□□□ 0.55
PSMD8-208ENST00000592561 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.559e-9■■■■■ 35.9
PSMD8-208ENST00000592561 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
PSMD8-208ENST00000592561 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
PSMD8-208ENST00000592561 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
PSMD8-208ENST00000592561 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
PSMD8-208ENST00000592561 GRIN2BQ13224 1484 aa18.39■□□□□ 0.54
PSMD8-208ENST00000592561 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
PSMD8-208ENST00000592561 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.53
PSMD8-208ENST00000592561 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.52
PSMD8-208ENST00000592561 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
PSMD8-208ENST00000592561 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
PSMD8-208ENST00000592561 IGF1RP08069 1367 aa18.28■□□□□ 0.52
PSMD8-208ENST00000592561 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
PSMD8-208ENST00000592561 EEA1Q15075 1411 aa18.25■□□□□ 0.51
PSMD8-208ENST00000592561 SYNJ2O15056 1496 aa18.25■□□□□ 0.51
PSMD8-208ENST00000592561 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
PSMD8-208ENST00000592561 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
PSMD8-208ENST00000592561 CUL7Q14999 1698 aa18.22■□□□□ 0.51
PSMD8-208ENST00000592561 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
PSMD8-208ENST00000592561 CHD1O14646 1710 aa18.18■□□□□ 0.5
PSMD8-208ENST00000592561 FBLN2P98095 1184 aa18.18■□□□□ 0.5
PSMD8-208ENST00000592561 RIMBP3CA6NJZ7 1639 aa18.18■□□□□ 0.5
PSMD8-208ENST00000592561 RIMBP3BA6NNM3 1639 aa18.18■□□□□ 0.5
PSMD8-208ENST00000592561 RIMBP3Q9UFD9 1639 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms