RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
SPC24-206ENST00000592540 LRRC9Q6ZRR7 1453 aa25.56■■□□□ 1.68
SPC24-206ENST00000592540 CFTRP13569 1480 aa25.55■■□□□ 1.68
SPC24-206ENST00000592540 PPP1R15AO75807 674 aaPredicted RBP25.54■■□□□ 1.68
SPC24-206ENST00000592540 SIN3AQ96ST3 1273 aa25.54■■□□□ 1.68
SPC24-206ENST00000592540 PHLDB1Q86UU1 1377 aa25.52■■□□□ 1.68
SPC24-206ENST00000592540 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
SPC24-206ENST00000592540 IGF1RP08069 1367 aa25.49■■□□□ 1.67
SPC24-206ENST00000592540 CFAP43Q8NDM7 1665 aa25.47■■□□□ 1.67
SPC24-206ENST00000592540 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
SPC24-206ENST00000592540 CCER2I3L3R5 266 aa25.45■■□□□ 1.66
SPC24-206ENST00000592540 FAM50AQ14320 339 aaKnown RBP25.45■■□□□ 1.66
SPC24-206ENST00000592540 NEFLP07196 543 aa25.45■■□□□ 1.66
SPC24-206ENST00000592540 FHAD1B1AJZ9 1412 aa25.4■■□□□ 1.66
SPC24-206ENST00000592540 CARMIL1Q5VZK9 1371 aa25.39■■□□□ 1.66
SPC24-206ENST00000592540 RBM19Q9Y4C8 960 aaKnown RBP25.38■■□□□ 1.65
SPC24-206ENST00000592540 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
SPC24-206ENST00000592540 ANP32CO43423 234 aa25.37■■□□□ 1.65
SPC24-206ENST00000592540 TRIM52Q96A61 297 aa25.37■■□□□ 1.65
SPC24-206ENST00000592540 HIRIP3Q9BW71 556 aaPredicted RBP25.37■■□□□ 1.65
SPC24-206ENST00000592540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.28■■□□□ 1.64
SPC24-206ENST00000592540 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
SPC24-206ENST00000592540 BCL11AQ9H165 835 aa25.24■■□□□ 1.63
SPC24-206ENST00000592540 P3H3Q8IVL6 736 aa25.23■■□□□ 1.63
SPC24-206ENST00000592540 FYCO1Q9BQS8 1478 aa25.22■■□□□ 1.63
SPC24-206ENST00000592540 ATP1B4Q9UN42 357 aaPredicted RBP25.22■■□□□ 1.63
SPC24-206ENST00000592540 TONSLQ96HA7 1378 aa25.21■■□□□ 1.63
SPC24-206ENST00000592540 FHOD3Q2V2M9 1422 aa25.18■■□□□ 1.62
SPC24-206ENST00000592540 CASKIN1Q8WXD9 1431 aa25.17■■□□□ 1.62
SPC24-206ENST00000592540 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.624e-7■□□□□ 8.6
SPC24-206ENST00000592540 CCDC18Q5T9S5 1454 aa25.15■■□□□ 1.62
SPC24-206ENST00000592540 EFCAB5A4FU69 1503 aa25.15■■□□□ 1.62
SPC24-206ENST00000592540 FGD6Q6ZV73 1430 aa25.14■■□□□ 1.61
SPC24-206ENST00000592540 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
SPC24-206ENST00000592540 UACAQ9BZF9 1416 aa25.11■■□□□ 1.61
SPC24-206ENST00000592540 PTPN23Q9H3S7 1636 aa25.09■■□□□ 1.61
SPC24-206ENST00000592540 MSH5O43196 834 aa25.08■■□□□ 1.61
SPC24-206ENST00000592540 HFM1A2PYH4 1435 aa25.08■■□□□ 1.61
SPC24-206ENST00000592540 CTTNBP2Q8WZ74 1663 aa25.05■■□□□ 1.6
SPC24-206ENST00000592540 PTPRKQ15262 1439 aa25.05■■□□□ 1.6
SPC24-206ENST00000592540 HNRNPUQ00839 825 aaKnown RBP eCLIP25.04■■□□□ 1.6
SPC24-206ENST00000592540 KDM5BQ9UGL1 1544 aa25.03■■□□□ 1.6
SPC24-206ENST00000592540 FANCIQ9NVI1 1328 aa25.01■■□□□ 1.59
SPC24-206ENST00000592540 FMN1Q68DA7 1419 aa25■■□□□ 1.59
SPC24-206ENST00000592540 NAIPQ13075 1403 aa24.99■■□□□ 1.59
SPC24-206ENST00000592540 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
SPC24-206ENST00000592540 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
SPC24-206ENST00000592540 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
SPC24-206ENST00000592540 CUL7Q14999 1698 aa24.97■■□□□ 1.59
SPC24-206ENST00000592540 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
SPC24-206ENST00000592540 IRX6P78412 446 aaPredicted RBP24.96■■□□□ 1.59
SPC24-206ENST00000592540 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
SPC24-206ENST00000592540 LRRIQ1Q96JM4 1722 aa24.95■■□□□ 1.58
SPC24-206ENST00000592540 RAD54L2Q9Y4B4 1467 aa24.94■■□□□ 1.58
SPC24-206ENST00000592540 WASHC2AQ641Q2 1341 aa24.92■■□□□ 1.58
SPC24-206ENST00000592540 FANCD2Q9BXW9 1451 aa24.91■■□□□ 1.58
SPC24-206ENST00000592540 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
SPC24-206ENST00000592540 ERICH6BQ5W0A0 696 aa24.91■■□□□ 1.58
SPC24-206ENST00000592540 MYOM3Q5VTT5 1437 aa24.9■■□□□ 1.58
SPC24-206ENST00000592540 NCOA2Q15596 1464 aa24.9■■□□□ 1.58
SPC24-206ENST00000592540 HSPA5P11021 654 aaKnown RBP24.88■■□□□ 1.57
SPC24-206ENST00000592540 SUPT6HQ7KZ85 1726 aaKnown RBP24.88■■□□□ 1.57
SPC24-206ENST00000592540 POLA1P09884 1462 aaPredicted RBP24.87■■□□□ 1.57
SPC24-206ENST00000592540 SAMD9Q5K651 1589 aa24.84■■□□□ 1.57
SPC24-206ENST00000592540 PPP4R2Q9NY27 417 aa24.84■■□□□ 1.57
SPC24-206ENST00000592540 TOPBP1Q92547 1522 aa24.83■■□□□ 1.56
SPC24-206ENST00000592540 ERICH6Q7L0X2 663 aa24.82■■□□□ 1.56
SPC24-206ENST00000592540 HECW1Q76N89 1606 aa24.82■■□□□ 1.56
SPC24-206ENST00000592540 CNTLNQ9NXG0 1405 aa24.82■■□□□ 1.56
SPC24-206ENST00000592540 GRIN2BQ13224 1484 aa24.82■■□□□ 1.56
SPC24-206ENST00000592540 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
SPC24-206ENST00000592540 EHBP1L1Q8N3D4 1523 aa24.8■■□□□ 1.56
SPC24-206ENST00000592540 GCC2Q8IWJ2 1684 aa24.8■■□□□ 1.56
SPC24-206ENST00000592540 EIF4G2P78344 907 aaKnown RBP eCLIP24.79■■□□□ 1.56
SPC24-206ENST00000592540 DENND4BO75064 1496 aaPredicted RBP24.79■■□□□ 1.56
SPC24-206ENST00000592540 CCDC184Q52MB2 194 aa24.78■■□□□ 1.56
SPC24-206ENST00000592540 UGGT2Q9NYU1 1516 aa24.78■■□□□ 1.56
SPC24-206ENST00000592540 ARHGEF11O15085 1522 aa24.75■■□□□ 1.55
SPC24-206ENST00000592540 RRP7BPQ9NSQ0 103 aa24.74■■□□□ 1.55
SPC24-206ENST00000592540 PRKRIP1Q9H875 184 aaPredicted RBP24.72■■□□□ 1.55
SPC24-206ENST00000592540 TCOF1Q13428 1488 aaKnown RBP24.71■■□□□ 1.55
SPC24-206ENST00000592540 NCOA1Q15788 1441 aa24.7■■□□□ 1.55
SPC24-206ENST00000592540 KDM6BO15054 1643 aa24.7■■□□□ 1.54
SPC24-206ENST00000592540 CCDC7Q96M83 1385 aa24.69■■□□□ 1.54
SPC24-206ENST00000592540 ZBED9Q6R2W3 1325 aa24.69■■□□□ 1.54
SPC24-206ENST00000592540 MAGI3Q5TCQ9 1506 aa24.69■■□□□ 1.54
SPC24-206ENST00000592540 CHIC2Q9UKJ5 165 aa24.69■■□□□ 1.54
SPC24-206ENST00000592540 C11orf95C9JLR9 678 aaPredicted RBP24.68■■□□□ 1.54
SPC24-206ENST00000592540 FAM9BQ8IZU0 186 aa24.68■■□□□ 1.54
SPC24-206ENST00000592540 AKNAQ7Z591 1439 aa24.68■■□□□ 1.54
SPC24-206ENST00000592540 KIF21AQ7Z4S6 1674 aa24.68■■□□□ 1.54
SPC24-206ENST00000592540 L3MBTL2Q969R5 705 aa24.66■■□□□ 1.54
SPC24-206ENST00000592540 B4GALNT3Q6L9W6 998 aa24.66■■□□□ 1.54
SPC24-206ENST00000592540 MRS2Q9HD23 443 aa24.66■■□□□ 1.54
SPC24-206ENST00000592540 MPHOSPH9Q99550 1183 aa24.64■■□□□ 1.53
SPC24-206ENST00000592540 POLR1AO95602 1720 aaPredicted RBP24.63■■□□□ 1.53
SPC24-206ENST00000592540 ABCA5Q8WWZ7 1642 aa24.63■■□□□ 1.53
SPC24-206ENST00000592540 MYT1LQ9UL68 1186 aa24.63■■□□□ 1.53
SPC24-206ENST00000592540 NESP48681 1621 aa24.58■■□□□ 1.52
SPC24-206ENST00000592540 FOXD1Q16676 465 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms