RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 NPM1P06748 294 aaKnown RBP eCLIP35■■■■□ 3.19
PRKCSH-216ENST00000592445 FAM69CQ0P6D2 419 aa34.96■■■■□ 3.19
PRKCSH-216ENST00000592445 RUSC2Q8N2Y8 1516 aa34.94■■■■□ 3.18
PRKCSH-216ENST00000592445 ABCC10Q5T3U5 1492 aa34.9■■■■□ 3.18
PRKCSH-216ENST00000592445 MAPKBP1O60336 1514 aa34.83■■■■□ 3.17
PRKCSH-216ENST00000592445 ADCY10Q96PN6 1610 aa34.78■■■■□ 3.16
PRKCSH-216ENST00000592445 DIP2BQ9P265 1576 aa34.76■■■■□ 3.16
PRKCSH-216ENST00000592445 KIAA0586Q9BVV6 1533 aa34.75■■■■□ 3.15
PRKCSH-216ENST00000592445 IGF1RP08069 1367 aa34.7■■■■□ 3.15
PRKCSH-216ENST00000592445 KIF27Q86VH2 1401 aa34.67■■■■□ 3.14
PRKCSH-216ENST00000592445 KDM6BO15054 1643 aa34.63■■■■□ 3.13
PRKCSH-216ENST00000592445 CUL7Q14999 1698 aa34.62■■■■□ 3.13
PRKCSH-216ENST00000592445 TTBK1Q5TCY1 1321 aaPredicted RBP34.58■■■■□ 3.13
PRKCSH-216ENST00000592445 PTPRGP23470 1445 aa34.57■■■■□ 3.13
PRKCSH-216ENST00000592445 TSPOAP1O95153 1857 aa34.57■■■■□ 3.12
PRKCSH-216ENST00000592445 KDM4FA0A1W2PPD8 638 aa34.53■■■■□ 3.12
PRKCSH-216ENST00000592445 CARMIL1Q5VZK9 1371 aa34.48■■■■□ 3.11
PRKCSH-216ENST00000592445 CARMIL2Q6F5E8 1435 aa34.47■■■■□ 3.11
PRKCSH-216ENST00000592445 TNIKQ9UKE5 1360 aa34.45■■■■□ 3.11
PRKCSH-216ENST00000592445 ABCC2Q92887 1545 aa34.41■■■■□ 3.1
PRKCSH-216ENST00000592445 ASXL2Q76L83 1435 aa34.37■■■■□ 3.09
PRKCSH-216ENST00000592445 PLB1Q6P1J6 1458 aa34.34■■■■□ 3.09
PRKCSH-216ENST00000592445 IQGAP2Q13576 1575 aa34.33■■■■□ 3.09
PRKCSH-216ENST00000592445 GLI2P10070 1586 aa34.28■■■■□ 3.08
PRKCSH-216ENST00000592445 UHRF1BP1LA0JNW5 1464 aa34.27■■■■□ 3.08
PRKCSH-216ENST00000592445 UACAQ9BZF9 1416 aa34.27■■■■□ 3.08
PRKCSH-216ENST00000592445 PPRC1Q5VV67 1664 aaKnown RBP34.22■■■■□ 3.07
PRKCSH-216ENST00000592445 DISP1Q96F81 1524 aa34.2■■■■□ 3.07
PRKCSH-216ENST00000592445 EPRSP07814 1512 aaKnown RBP34.14■■■■□ 3.06
PRKCSH-216ENST00000592445 ADGRL1O94910 1474 aa34.13■■■■□ 3.05
PRKCSH-216ENST00000592445 KDM5BQ9UGL1 1544 aa34.12■■■■□ 3.05
PRKCSH-216ENST00000592445 RAPGEF2Q9Y4G8 1499 aa34.09■■■■□ 3.05
PRKCSH-216ENST00000592445 COL17A1Q9UMD9 1497 aaPredicted RBP34.08■■■■□ 3.05
PRKCSH-216ENST00000592445 UGGT2Q9NYU1 1516 aa34.08■■■■□ 3.05
PRKCSH-216ENST00000592445 TEX14Q8IWB6 1497 aa34.07■■■■□ 3.05
PRKCSH-216ENST00000592445 MAP3K4Q9Y6R4 1608 aa34.07■■■■□ 3.04
PRKCSH-216ENST00000592445 ZCCHC11Q5TAX3 1644 aaKnown RBP34.04■■■■□ 3.04
PRKCSH-216ENST00000592445 ILDR1Q86SU0 546 aaPredicted RBP34.03■■■■□ 3.04
PRKCSH-216ENST00000592445 KIAA0556O60303 1618 aa34.01■■■■□ 3.04
PRKCSH-216ENST00000592445 WDR7Q9Y4E6 1490 aa33.94■■■■□ 3.02
PRKCSH-216ENST00000592445 KCNH8Q96L42 1107 aa33.84■■■■□ 3.01
PRKCSH-216ENST00000592445 CD109Q6YHK3 1445 aa33.81■■■■□ 3
PRKCSH-216ENST00000592445 GOLGA3Q08378 1498 aa33.81■■■■□ 3
PRKCSH-216ENST00000592445 HECW2Q9P2P5 1572 aa33.81■■■■□ 3
PRKCSH-216ENST00000592445 CTTNBP2Q8WZ74 1663 aa33.78■■■■□ 3
PRKCSH-216ENST00000592445 MAGI3Q5TCQ9 1506 aa33.76■■■■□ 3
PRKCSH-216ENST00000592445 CFAP43Q8NDM7 1665 aa33.74■■■□□ 2.99
PRKCSH-216ENST00000592445 ABCA8O94911 1581 aa33.73■■■□□ 2.99
PRKCSH-216ENST00000592445 FAM9AQ8IZU1 332 aaPredicted RBP33.64■■■□□ 2.98
PRKCSH-216ENST00000592445 ARID3CA6NKF2 412 aa33.6■■■□□ 2.97
PRKCSH-216ENST00000592445 PRXQ9BXM0 1461 aa33.58■■■□□ 2.97
PRKCSH-216ENST00000592445 KIF21BO75037 1637 aa33.55■■■□□ 2.96
PRKCSH-216ENST00000592445 P3H3Q8IVL6 736 aa33.54■■■□□ 2.96
PRKCSH-216ENST00000592445 ARAP3Q8WWN8 1544 aa33.52■■■□□ 2.96
PRKCSH-216ENST00000592445 ATP10BO94823 1461 aa33.48■■■□□ 2.95
PRKCSH-216ENST00000592445 PHLDB1Q86UU1 1377 aa33.42■■■□□ 2.94
PRKCSH-216ENST00000592445 ABCA9Q8IUA7 1624 aa33.39■■■□□ 2.93
PRKCSH-216ENST00000592445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.38■■■□□ 2.93
PRKCSH-216ENST00000592445 HNRNPUL2Q1KMD3 747 aaKnown RBP33.38■■■□□ 2.93
PRKCSH-216ENST00000592445 RAPGEF3O95398 923 aa33.37■■■□□ 2.93
PRKCSH-216ENST00000592445 PTPRMP28827 1452 aa33.32■■■□□ 2.92
PRKCSH-216ENST00000592445 NEO1Q92859 1461 aa33.31■■■□□ 2.92
PRKCSH-216ENST00000592445 RAPGEF6Q8TEU7 1601 aa33.28■■■□□ 2.92
PRKCSH-216ENST00000592445 SAMD9Q5K651 1589 aa33.28■■■□□ 2.92
PRKCSH-216ENST00000592445 ADAMTSL3P82987 1691 aa33.28■■■□□ 2.92
PRKCSH-216ENST00000592445 ARID4BQ4LE39 1312 aaPredicted RBP33.28■■■□□ 2.92
PRKCSH-216ENST00000592445 CSRNP3Q8WYN3 585 aa33.26■■■□□ 2.91
PRKCSH-216ENST00000592445 FBXO41Q8TF61 875 aa33.25■■■□□ 2.91
PRKCSH-216ENST00000592445 RANGAP1P46060 587 aaPredicted RBP33.21■■■□□ 2.91
PRKCSH-216ENST00000592445 FRMPD1Q5SYB0 1578 aa33.17■■■□□ 2.9
PRKCSH-216ENST00000592445 NUP153P49790 1475 aaKnown RBP33.17■■■□□ 2.9
PRKCSH-216ENST00000592445 BCORL1Q5H9F3 1711 aa33.16■■■□□ 2.9
PRKCSH-216ENST00000592445 MADDQ8WXG6 1647 aa33.14■■■□□ 2.9
PRKCSH-216ENST00000592445 PLEKHD1A6NEE1 506 aa33.13■■■□□ 2.89
PRKCSH-216ENST00000592445 FHOD3Q2V2M9 1422 aa33.11■■■□□ 2.89
PRKCSH-216ENST00000592445 PCF11O94913 1555 aaKnown RBP33.09■■■□□ 2.89
PRKCSH-216ENST00000592445 DENND4BO75064 1496 aaPredicted RBP33.09■■■□□ 2.89
PRKCSH-216ENST00000592445 ARHGEF40Q8TER5 1519 aa33.06■■■□□ 2.88
PRKCSH-216ENST00000592445 AKNAQ7Z591 1439 aa33.05■■■□□ 2.88
PRKCSH-216ENST00000592445 LMTK3Q96Q04 1460 aa33.04■■■□□ 2.88
PRKCSH-216ENST00000592445 FANCAO15360 1455 aa33.02■■■□□ 2.88
PRKCSH-216ENST00000592445 RIMS1Q86UR5 1692 aaKnown RBP33.01■■■□□ 2.87
PRKCSH-216ENST00000592445 PLPPR3Q6T4P5 718 aa33■■■□□ 2.87
PRKCSH-216ENST00000592445 RICTORQ6R327 1708 aa32.99■■■□□ 2.87
PRKCSH-216ENST00000592445 CFAP74Q9C0B2 1584 aa32.99■■■□□ 2.87
PRKCSH-216ENST00000592445 EEA1Q15075 1411 aa32.98■■■□□ 2.87
PRKCSH-216ENST00000592445 POGZQ7Z3K3 1410 aa32.97■■■□□ 2.87
PRKCSH-216ENST00000592445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.97■■■□□ 2.87
PRKCSH-216ENST00000592445 HSPA2P54652 639 aa32.92■■■□□ 2.86
PRKCSH-216ENST00000592445 TTC37Q6PGP7 1564 aa32.91■■■□□ 2.86
PRKCSH-216ENST00000592445 ZFYVE16Q7Z3T8 1539 aa32.9■■■□□ 2.86
PRKCSH-216ENST00000592445 ZMYM4Q5VZL5 1548 aa32.89■■■□□ 2.86
PRKCSH-216ENST00000592445 EFCAB5A4FU69 1503 aa32.88■■■□□ 2.85
PRKCSH-216ENST00000592445 YEATS2Q9ULM3 1422 aa32.88■■■□□ 2.85
PRKCSH-216ENST00000592445 MLECQ14165 292 aa32.86■■■□□ 2.85
PRKCSH-216ENST00000592445 MAGI2Q86UL8 1455 aa32.85■■■□□ 2.85
PRKCSH-216ENST00000592445 CDK13Q14004 1512 aaKnown RBP32.81■■■□□ 2.84
PRKCSH-216ENST00000592445 SCAPERQ9BY12 1400 aa32.8■■■□□ 2.84
PRKCSH-216ENST00000592445 HECW1Q76N89 1606 aa32.8■■■□□ 2.84
PRKCSH-216ENST00000592445 SIGLEC1Q9BZZ2 1709 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms