RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
PRKCSH-215ENST00000592435 CUL7Q14999 1698 aa16.65■□□□□ 0.26
PRKCSH-215ENST00000592435 KIAA0586Q9BVV6 1533 aa16.63■□□□□ 0.25
PRKCSH-215ENST00000592435 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
PRKCSH-215ENST00000592435 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
PRKCSH-215ENST00000592435 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRKCSH-215ENST00000592435 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
PRKCSH-215ENST00000592435 PTPRGP23470 1445 aa16.45■□□□□ 0.22
PRKCSH-215ENST00000592435 IQGAP2Q13576 1575 aa16.45■□□□□ 0.22
PRKCSH-215ENST00000592435 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
PRKCSH-215ENST00000592435 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
PRKCSH-215ENST00000592435 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
PRKCSH-215ENST00000592435 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
PRKCSH-215ENST00000592435 UGGT2Q9NYU1 1516 aa16.38■□□□□ 0.21
PRKCSH-215ENST00000592435 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
PRKCSH-215ENST00000592435 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
PRKCSH-215ENST00000592435 TTBK1Q5TCY1 1321 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-215ENST00000592435 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
PRKCSH-215ENST00000592435 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
PRKCSH-215ENST00000592435 UHRF1BP1LA0JNW5 1464 aa16.31■□□□□ 0.2
PRKCSH-215ENST00000592435 UACAQ9BZF9 1416 aa16.31■□□□□ 0.2
PRKCSH-215ENST00000592435 ABCC2Q92887 1545 aa16.3■□□□□ 0.2
PRKCSH-215ENST00000592435 EEA1Q15075 1411 aa16.29■□□□□ 0.2
PRKCSH-215ENST00000592435 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
PRKCSH-215ENST00000592435 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
PRKCSH-215ENST00000592435 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
PRKCSH-215ENST00000592435 CTTNBP2Q8WZ74 1663 aa16.26■□□□□ 0.19
PRKCSH-215ENST00000592435 DIP2BQ9P265 1576 aa16.26■□□□□ 0.19
PRKCSH-215ENST00000592435 PLB1Q6P1J6 1458 aa16.24■□□□□ 0.19
PRKCSH-215ENST00000592435 ASXL2Q76L83 1435 aa16.23■□□□□ 0.19
PRKCSH-215ENST00000592435 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
PRKCSH-215ENST00000592435 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
PRKCSH-215ENST00000592435 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
PRKCSH-215ENST00000592435 GLI2P10070 1586 aa16.15■□□□□ 0.18
PRKCSH-215ENST00000592435 P3H3Q8IVL6 736 aa16.15■□□□□ 0.18
PRKCSH-215ENST00000592435 ABCA8O94911 1581 aa16.14■□□□□ 0.17
PRKCSH-215ENST00000592435 ZCCHC11Q5TAX3 1644 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-215ENST00000592435 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-215ENST00000592435 WDR7Q9Y4E6 1490 aa16.1■□□□□ 0.17
PRKCSH-215ENST00000592435 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
PRKCSH-215ENST00000592435 KIF21BO75037 1637 aa16.08■□□□□ 0.17
PRKCSH-215ENST00000592435 TSPOAP1O95153 1857 aa16.08■□□□□ 0.16
PRKCSH-215ENST00000592435 KDM6BO15054 1643 aa16.06■□□□□ 0.16
PRKCSH-215ENST00000592435 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-215ENST00000592435 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-215ENST00000592435 KCNH8Q96L42 1107 aa16.05■□□□□ 0.16
PRKCSH-215ENST00000592435 ATP10BO94823 1461 aa16.04■□□□□ 0.16
PRKCSH-215ENST00000592435 MAP3K4Q9Y6R4 1608 aa16.04■□□□□ 0.16
PRKCSH-215ENST00000592435 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-215ENST00000592435 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
PRKCSH-215ENST00000592435 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-215ENST00000592435 ARID3CA6NKF2 412 aa16.01■□□□□ 0.15
PRKCSH-215ENST00000592435 CD109Q6YHK3 1445 aa16.01■□□□□ 0.15
PRKCSH-215ENST00000592435 FHOD3Q2V2M9 1422 aa16■□□□□ 0.15
PRKCSH-215ENST00000592435 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
PRKCSH-215ENST00000592435 RAPGEF6Q8TEU7 1601 aa15.98■□□□□ 0.15
PRKCSH-215ENST00000592435 MAGI3Q5TCQ9 1506 aa15.98■□□□□ 0.15
PRKCSH-215ENST00000592435 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-215ENST00000592435 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
PRKCSH-215ENST00000592435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
PRKCSH-215ENST00000592435 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-215ENST00000592435 NUP153P49790 1475 aaKnown RBP15.96■□□□□ 0.14
PRKCSH-215ENST00000592435 CFAP43Q8NDM7 1665 aa15.95■□□□□ 0.14
PRKCSH-215ENST00000592435 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
PRKCSH-215ENST00000592435 KDM4FA0A1W2PPD8 638 aa15.9■□□□□ 0.14
PRKCSH-215ENST00000592435 PHLDB1Q86UU1 1377 aa15.89■□□□□ 0.13
PRKCSH-215ENST00000592435 FMN1Q68DA7 1419 aa15.88■□□□□ 0.13
PRKCSH-215ENST00000592435 ABCA9Q8IUA7 1624 aa15.88■□□□□ 0.13
PRKCSH-215ENST00000592435 ARHGAP35Q9NRY4 1499 aa15.88■□□□□ 0.13
PRKCSH-215ENST00000592435 ARAP3Q8WWN8 1544 aa15.85■□□□□ 0.13
PRKCSH-215ENST00000592435 ATP1B4Q9UN42 357 aaPredicted RBP15.83■□□□□ 0.12
PRKCSH-215ENST00000592435 NEO1Q92859 1461 aa15.82■□□□□ 0.12
PRKCSH-215ENST00000592435 CDK11AQ9UQ88 783 aaPredicted RBP15.81■□□□□ 0.12
PRKCSH-215ENST00000592435 CDK13Q14004 1512 aaKnown RBP15.79■□□□□ 0.12
PRKCSH-215ENST00000592435 HECW1Q76N89 1606 aa15.77■□□□□ 0.12
PRKCSH-215ENST00000592435 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
PRKCSH-215ENST00000592435 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.77■□□□□ 0.11
PRKCSH-215ENST00000592435 ADGRL1O94910 1474 aa15.76■□□□□ 0.11
PRKCSH-215ENST00000592435 FANCAO15360 1455 aa15.73■□□□□ 0.11
PRKCSH-215ENST00000592435 AKNAQ7Z591 1439 aa15.73■□□□□ 0.11
PRKCSH-215ENST00000592435 PLCH2O75038 1416 aa15.72■□□□□ 0.11
PRKCSH-215ENST00000592435 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
PRKCSH-215ENST00000592435 CLIP1P30622 1438 aa15.71■□□□□ 0.11
PRKCSH-215ENST00000592435 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
PRKCSH-215ENST00000592435 TROQ12816 1431 aaPredicted RBP15.7■□□□□ 0.1
PRKCSH-215ENST00000592435 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
PRKCSH-215ENST00000592435 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
PRKCSH-215ENST00000592435 CFAP74Q9C0B2 1584 aa15.69■□□□□ 0.1
PRKCSH-215ENST00000592435 CCDC18Q5T9S5 1454 aa15.66■□□□□ 0.1
PRKCSH-215ENST00000592435 FRMPD1Q5SYB0 1578 aa15.66■□□□□ 0.1
PRKCSH-215ENST00000592435 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
PRKCSH-215ENST00000592435 PCF11O94913 1555 aaKnown RBP15.64■□□□□ 0.09
PRKCSH-215ENST00000592435 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
PRKCSH-215ENST00000592435 KIF14Q15058 1648 aa15.63■□□□□ 0.09
PRKCSH-215ENST00000592435 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
PRKCSH-215ENST00000592435 MAGI2Q86UL8 1455 aa15.62■□□□□ 0.09
PRKCSH-215ENST00000592435 RICTORQ6R327 1708 aa15.62■□□□□ 0.09
PRKCSH-215ENST00000592435 ARID4BQ4LE39 1312 aaPredicted RBP15.6■□□□□ 0.09
PRKCSH-215ENST00000592435 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
PRKCSH-215ENST00000592435 ZMYM4Q5VZL5 1548 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms