RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 NISCHQ9Y2I1 1504 aa23.91■■□□□ 1.42
PRKCSH-215ENST00000592435 CCDC180Q9P1Z9 1646 aa21.31■■□□□ 1
PRKCSH-215ENST00000592435 ABCC9O60706 1549 aa21.13■□□□□ 0.97
PRKCSH-215ENST00000592435 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
PRKCSH-215ENST00000592435 NACADO15069 1562 aa20.15■□□□□ 0.82
PRKCSH-215ENST00000592435 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
PRKCSH-215ENST00000592435 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
PRKCSH-215ENST00000592435 ZCCHC6Q5VYS8 1495 aaKnown RBP19.85■□□□□ 0.77
PRKCSH-215ENST00000592435 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
PRKCSH-215ENST00000592435 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
PRKCSH-215ENST00000592435 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
PRKCSH-215ENST00000592435 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
PRKCSH-215ENST00000592435 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
PRKCSH-215ENST00000592435 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
PRKCSH-215ENST00000592435 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
PRKCSH-215ENST00000592435 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
PRKCSH-215ENST00000592435 CC2D2AQ9P2K1 1620 aa19.08■□□□□ 0.65
PRKCSH-215ENST00000592435 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
PRKCSH-215ENST00000592435 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
PRKCSH-215ENST00000592435 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
PRKCSH-215ENST00000592435 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
PRKCSH-215ENST00000592435 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
PRKCSH-215ENST00000592435 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
PRKCSH-215ENST00000592435 HMGXB3Q12766 1538 aa18.46■□□□□ 0.55
PRKCSH-215ENST00000592435 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
PRKCSH-215ENST00000592435 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
PRKCSH-215ENST00000592435 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.54
PRKCSH-215ENST00000592435 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
PRKCSH-215ENST00000592435 NESP48681 1621 aa18.21■□□□□ 0.51
PRKCSH-215ENST00000592435 WIZO95785 1651 aa18.16■□□□□ 0.5
PRKCSH-215ENST00000592435 CUX2O14529 1486 aa18.15■□□□□ 0.5
PRKCSH-215ENST00000592435 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
PRKCSH-215ENST00000592435 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
PRKCSH-215ENST00000592435 CADPSQ9ULU8 1353 aa18.08■□□□□ 0.49
PRKCSH-215ENST00000592435 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
PRKCSH-215ENST00000592435 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-215ENST00000592435 DNAJC5Q9H3Z4 198 aa17.96■□□□□ 0.47
PRKCSH-215ENST00000592435 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-215ENST00000592435 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
PRKCSH-215ENST00000592435 CFTRP13569 1480 aa17.9■□□□□ 0.46
PRKCSH-215ENST00000592435 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
PRKCSH-215ENST00000592435 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
PRKCSH-215ENST00000592435 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
PRKCSH-215ENST00000592435 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
PRKCSH-215ENST00000592435 WDR62O43379 1518 aa17.79■□□□□ 0.44
PRKCSH-215ENST00000592435 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-215ENST00000592435 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
PRKCSH-215ENST00000592435 ABCC8Q09428 1581 aa17.54■□□□□ 0.4
PRKCSH-215ENST00000592435 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
PRKCSH-215ENST00000592435 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-215ENST00000592435 IFT140Q96RY7 1462 aa17.48■□□□□ 0.39
PRKCSH-215ENST00000592435 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
PRKCSH-215ENST00000592435 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
PRKCSH-215ENST00000592435 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-215ENST00000592435 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-215ENST00000592435 TARBP1Q13395 1621 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-215ENST00000592435 SOGA1O94964 1423 aa17.31■□□□□ 0.36
PRKCSH-215ENST00000592435 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.363e-6■■□□□ 13.8
PRKCSH-215ENST00000592435 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-215ENST00000592435 CUX1P39880 1505 aa17.27■□□□□ 0.36
PRKCSH-215ENST00000592435 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
PRKCSH-215ENST00000592435 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
PRKCSH-215ENST00000592435 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-215ENST00000592435 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
PRKCSH-215ENST00000592435 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
PRKCSH-215ENST00000592435 FBLN2P98095 1184 aa17.16■□□□□ 0.34
PRKCSH-215ENST00000592435 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
PRKCSH-215ENST00000592435 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.33
PRKCSH-215ENST00000592435 CHMP7Q8WUX9 453 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-215ENST00000592435 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
PRKCSH-215ENST00000592435 MAGI1Q96QZ7 1491 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-215ENST00000592435 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
PRKCSH-215ENST00000592435 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
PRKCSH-215ENST00000592435 CHD1O14646 1710 aa17.08■□□□□ 0.32
PRKCSH-215ENST00000592435 RIMBP3CA6NJZ7 1639 aa17.06■□□□□ 0.32
PRKCSH-215ENST00000592435 RIMBP3BA6NNM3 1639 aa17.06■□□□□ 0.32
PRKCSH-215ENST00000592435 TOP2BQ02880 1626 aa17.06■□□□□ 0.32
PRKCSH-215ENST00000592435 RIMBP3Q9UFD9 1639 aa17.06■□□□□ 0.32
PRKCSH-215ENST00000592435 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
PRKCSH-215ENST00000592435 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
PRKCSH-215ENST00000592435 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
PRKCSH-215ENST00000592435 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
PRKCSH-215ENST00000592435 ABCA5Q8WWZ7 1642 aa17■□□□□ 0.31
PRKCSH-215ENST00000592435 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
PRKCSH-215ENST00000592435 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
PRKCSH-215ENST00000592435 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.3
PRKCSH-215ENST00000592435 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
PRKCSH-215ENST00000592435 FHAD1B1AJZ9 1412 aa16.89■□□□□ 0.29
PRKCSH-215ENST00000592435 ERICH3Q5RHP9 1530 aa16.89■□□□□ 0.29
PRKCSH-215ENST00000592435 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
PRKCSH-215ENST00000592435 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
PRKCSH-215ENST00000592435 NUP160Q12769 1436 aa16.83■□□□□ 0.28
PRKCSH-215ENST00000592435 CEP170Q5SW79 1584 aa16.78■□□□□ 0.28
PRKCSH-215ENST00000592435 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
PRKCSH-215ENST00000592435 IGF1RP08069 1367 aa16.77■□□□□ 0.28
PRKCSH-215ENST00000592435 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
PRKCSH-215ENST00000592435 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-215ENST00000592435 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
PRKCSH-215ENST00000592435 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
PRKCSH-215ENST00000592435 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms