RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 HNRNPUL2Q1KMD3 747 aaKnown RBP23.83■■□□□ 1.41
MBD1-227ENST00000592060 RRBP1Q9P2E9 1410 aaKnown RBP23.82■■□□□ 1.4
MBD1-227ENST00000592060 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
MBD1-227ENST00000592060 CFAP43Q8NDM7 1665 aa23.8■■□□□ 1.4
MBD1-227ENST00000592060 PCF11O94913 1555 aaKnown RBP23.79■■□□□ 1.4
MBD1-227ENST00000592060 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
MBD1-227ENST00000592060 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
MBD1-227ENST00000592060 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
MBD1-227ENST00000592060 FHOD3Q2V2M9 1422 aa23.71■■□□□ 1.39
MBD1-227ENST00000592060 SAMD9Q5K651 1589 aa23.7■■□□□ 1.38
MBD1-227ENST00000592060 LRRC9Q6ZRR7 1453 aa23.7■■□□□ 1.38
MBD1-227ENST00000592060 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.386e-7■■■□□ 18.9
MBD1-227ENST00000592060 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
MBD1-227ENST00000592060 CCNB3Q8WWL7 1395 aa23.66■■□□□ 1.38
MBD1-227ENST00000592060 WDR62O43379 1518 aa23.65■■□□□ 1.38
MBD1-227ENST00000592060 CASKIN1Q8WXD9 1431 aa23.65■■□□□ 1.38
MBD1-227ENST00000592060 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
MBD1-227ENST00000592060 P3H3Q8IVL6 736 aa23.62■■□□□ 1.37
MBD1-227ENST00000592060 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
MBD1-227ENST00000592060 FMN1Q68DA7 1419 aa23.58■■□□□ 1.37
MBD1-227ENST00000592060 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
MBD1-227ENST00000592060 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
MBD1-227ENST00000592060 PHLDB1Q86UU1 1377 aa23.54■■□□□ 1.36
MBD1-227ENST00000592060 LRRIQ1Q96JM4 1722 aa23.53■■□□□ 1.36
MBD1-227ENST00000592060 DHX57Q6P158 1386 aaKnown RBP23.51■■□□□ 1.35
MBD1-227ENST00000592060 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
MBD1-227ENST00000592060 ZNF608Q9ULD9 1512 aaPredicted RBP23.48■■□□□ 1.35
MBD1-227ENST00000592060 IQGAP2Q13576 1575 aa23.48■■□□□ 1.35
MBD1-227ENST00000592060 CLSPNQ9HAW4 1339 aa23.48■■□□□ 1.35
MBD1-227ENST00000592060 EIF4G3O43432 1585 aaKnown RBP23.43■■□□□ 1.34
MBD1-227ENST00000592060 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
MBD1-227ENST00000592060 ERCC6Q03468 1493 aa23.4■■□□□ 1.34
MBD1-227ENST00000592060 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
MBD1-227ENST00000592060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.36■■□□□ 1.33
MBD1-227ENST00000592060 EHBP1L1Q8N3D4 1523 aa23.34■■□□□ 1.33
MBD1-227ENST00000592060 HECW1Q76N89 1606 aa23.34■■□□□ 1.33
MBD1-227ENST00000592060 RAB3GAP2Q9H2M9 1393 aa23.33■■□□□ 1.33
MBD1-227ENST00000592060 ZNF316A6NFI3 1004 aaPredicted RBP23.33■■□□□ 1.33
MBD1-227ENST00000592060 ITGAEP38570 1179 aa23.33■■□□□ 1.33
MBD1-227ENST00000592060 SUPT6HQ7KZ85 1726 aaKnown RBP23.31■■□□□ 1.32
MBD1-227ENST00000592060 CCDC18Q5T9S5 1454 aa23.31■■□□□ 1.32
MBD1-227ENST00000592060 FGD6Q6ZV73 1430 aa23.31■■□□□ 1.32
MBD1-227ENST00000592060 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
MBD1-227ENST00000592060 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
MBD1-227ENST00000592060 SETD5Q9C0A6 1442 aa23.3■■□□□ 1.32
MBD1-227ENST00000592060 GRIN2AQ12879 1464 aa23.29■■□□□ 1.32
MBD1-227ENST00000592060 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
MBD1-227ENST00000592060 MAGI3Q5TCQ9 1506 aa23.27■■□□□ 1.32
MBD1-227ENST00000592060 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
MBD1-227ENST00000592060 NCOA2Q15596 1464 aa23.27■■□□□ 1.32
MBD1-227ENST00000592060 ARHGEF11O15085 1522 aa23.27■■□□□ 1.32
MBD1-227ENST00000592060 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
MBD1-227ENST00000592060 KIAA0556O60303 1618 aa23.26■■□□□ 1.31
MBD1-227ENST00000592060 MAPKBP1O60336 1514 aa23.25■■□□□ 1.31
MBD1-227ENST00000592060 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
MBD1-227ENST00000592060 MYOM3Q5VTT5 1437 aa23.22■■□□□ 1.31
MBD1-227ENST00000592060 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
MBD1-227ENST00000592060 SYNJ2O15056 1496 aa23.18■■□□□ 1.3
MBD1-227ENST00000592060 CEP170Q5SW79 1584 aa23.18■■□□□ 1.3
MBD1-227ENST00000592060 CDK13Q14004 1512 aaKnown RBP23.16■■□□□ 1.3
MBD1-227ENST00000592060 PTPN23Q9H3S7 1636 aa23.16■■□□□ 1.3
MBD1-227ENST00000592060 PTPRKQ15262 1439 aa23.12■■□□□ 1.29
MBD1-227ENST00000592060 TCOF1Q13428 1488 aaKnown RBP23.11■■□□□ 1.29
MBD1-227ENST00000592060 RAPGEF6Q8TEU7 1601 aa23.11■■□□□ 1.29
MBD1-227ENST00000592060 NUP160Q12769 1436 aa23.09■■□□□ 1.29
MBD1-227ENST00000592060 HFM1A2PYH4 1435 aa23.08■■□□□ 1.28
MBD1-227ENST00000592060 NUP153P49790 1475 aaKnown RBP23.06■■□□□ 1.28
MBD1-227ENST00000592060 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
MBD1-227ENST00000592060 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
MBD1-227ENST00000592060 NAIPQ13075 1403 aa23■■□□□ 1.27
MBD1-227ENST00000592060 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
MBD1-227ENST00000592060 AKNAQ7Z591 1439 aa22.94■■□□□ 1.26
MBD1-227ENST00000592060 UACAQ9BZF9 1416 aa22.94■■□□□ 1.26
MBD1-227ENST00000592060 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
MBD1-227ENST00000592060 ARID3CA6NKF2 412 aa22.91■■□□□ 1.26
MBD1-227ENST00000592060 PLB1Q6P1J6 1458 aa22.91■■□□□ 1.26
MBD1-227ENST00000592060 ADCY10Q96PN6 1610 aa22.9■■□□□ 1.26
MBD1-227ENST00000592060 FBLN2P98095 1184 aa22.9■■□□□ 1.26
MBD1-227ENST00000592060 SIN3AQ96ST3 1273 aa22.89■■□□□ 1.25
MBD1-227ENST00000592060 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
MBD1-227ENST00000592060 MIER1Q8N108 512 aa22.87■■□□□ 1.25
MBD1-227ENST00000592060 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
MBD1-227ENST00000592060 ABCA8O94911 1581 aa22.86■■□□□ 1.25
MBD1-227ENST00000592060 TROQ12816 1431 aaPredicted RBP22.86■■□□□ 1.25
MBD1-227ENST00000592060 TIMELESSQ9UNS1 1208 aa22.86■■□□□ 1.25
MBD1-227ENST00000592060 ITSN2Q9NZM3 1697 aa22.84■■□□□ 1.25
MBD1-227ENST00000592060 KDM6BO15054 1643 aa22.83■■□□□ 1.25
MBD1-227ENST00000592060 CHD1O14646 1710 aa22.83■■□□□ 1.24
MBD1-227ENST00000592060 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
MBD1-227ENST00000592060 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
MBD1-227ENST00000592060 KIF14Q15058 1648 aa22.81■■□□□ 1.24
MBD1-227ENST00000592060 ACIN1Q9UKV3 1341 aaKnown RBP22.8■■□□□ 1.24
MBD1-227ENST00000592060 DAPK1P53355 1430 aa22.8■■□□□ 1.24
MBD1-227ENST00000592060 NEUROD1Q13562 356 aa22.8■■□□□ 1.24
MBD1-227ENST00000592060 SCAF1Q9H7N4 1312 aaKnown RBP22.78■■□□□ 1.24
MBD1-227ENST00000592060 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
MBD1-227ENST00000592060 ROCK1Q13464 1354 aa22.77■■□□□ 1.23
MBD1-227ENST00000592060 ABCC5O15440 1437 aa22.76■■□□□ 1.23
MBD1-227ENST00000592060 DENND4BO75064 1496 aaPredicted RBP22.76■■□□□ 1.23
MBD1-227ENST00000592060 CHIC2Q9UKJ5 165 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms