RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
MBD1-225ENST00000591535 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
MBD1-225ENST00000591535 KIAA0586Q9BVV6 1533 aa23.25■■□□□ 1.31
MBD1-225ENST00000591535 JPH4Q96JJ6 628 aa23.24■■□□□ 1.31
MBD1-225ENST00000591535 EHMT2Q96KQ7 1210 aa23.21■■□□□ 1.31
MBD1-225ENST00000591535 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
MBD1-225ENST00000591535 KIF21BO75037 1637 aa23.17■■□□□ 1.3
MBD1-225ENST00000591535 IQGAP2Q13576 1575 aa23.17■■□□□ 1.3
MBD1-225ENST00000591535 CTTNBP2Q8WZ74 1663 aa23.16■■□□□ 1.3
MBD1-225ENST00000591535 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
MBD1-225ENST00000591535 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
MBD1-225ENST00000591535 ERCC6L2Q5T890 1561 aa23.13■■□□□ 1.29
MBD1-225ENST00000591535 UBTFP17480 764 aaKnown RBP23.1■■□□□ 1.29
MBD1-225ENST00000591535 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
MBD1-225ENST00000591535 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
MBD1-225ENST00000591535 CARMIL2Q6F5E8 1435 aa23.05■■□□□ 1.28
MBD1-225ENST00000591535 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
MBD1-225ENST00000591535 UGGT2Q9NYU1 1516 aa23.02■■□□□ 1.28
MBD1-225ENST00000591535 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
MBD1-225ENST00000591535 DISP1Q96F81 1524 aa22.97■■□□□ 1.27
MBD1-225ENST00000591535 TNIKQ9UKE5 1360 aa22.93■■□□□ 1.26
MBD1-225ENST00000591535 KIAA0556O60303 1618 aa22.93■■□□□ 1.26
MBD1-225ENST00000591535 PTPRGP23470 1445 aa22.92■■□□□ 1.26
MBD1-225ENST00000591535 P3H3Q8IVL6 736 aa22.91■■□□□ 1.26
MBD1-225ENST00000591535 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
MBD1-225ENST00000591535 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.25
MBD1-225ENST00000591535 EFCAB5A4FU69 1503 aa22.8■■□□□ 1.24
MBD1-225ENST00000591535 NPM1P06748 294 aaKnown RBP eCLIP22.77■■□□□ 1.24
MBD1-225ENST00000591535 FHOD3Q2V2M9 1422 aa22.77■■□□□ 1.24
MBD1-225ENST00000591535 UACAQ9BZF9 1416 aa22.75■■□□□ 1.23
MBD1-225ENST00000591535 ADCY10Q96PN6 1610 aa22.75■■□□□ 1.23
MBD1-225ENST00000591535 PLB1Q6P1J6 1458 aa22.71■■□□□ 1.23
MBD1-225ENST00000591535 ARHGAP35Q9NRY4 1499 aa22.71■■□□□ 1.23
MBD1-225ENST00000591535 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
MBD1-225ENST00000591535 CLIP1P30622 1438 aa22.68■■□□□ 1.22
MBD1-225ENST00000591535 UHRF1BP1LA0JNW5 1464 aa22.68■■□□□ 1.22
MBD1-225ENST00000591535 ABCA8O94911 1581 aa22.65■■□□□ 1.22
MBD1-225ENST00000591535 TRHP20396 242 aaPredicted RBP22.63■■□□□ 1.21
MBD1-225ENST00000591535 CEP162Q5TB80 1403 aa22.63■■□□□ 1.21
MBD1-225ENST00000591535 ARID3CA6NKF2 412 aa22.61■■□□□ 1.21
MBD1-225ENST00000591535 FMN1Q68DA7 1419 aa22.61■■□□□ 1.21
MBD1-225ENST00000591535 RAPGEF6Q8TEU7 1601 aa22.61■■□□□ 1.21
MBD1-225ENST00000591535 ATP1B4Q9UN42 357 aaPredicted RBP22.6■■□□□ 1.21
MBD1-225ENST00000591535 KDM5BQ9UGL1 1544 aa22.58■■□□□ 1.21
MBD1-225ENST00000591535 ZCCHC11Q5TAX3 1644 aaKnown RBP22.57■■□□□ 1.2
MBD1-225ENST00000591535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.56■■□□□ 1.2
MBD1-225ENST00000591535 HNRNPUL2Q1KMD3 747 aaKnown RBP22.56■■□□□ 1.2
MBD1-225ENST00000591535 MAPKBP1O60336 1514 aa22.55■■□□□ 1.2
MBD1-225ENST00000591535 NUP153P49790 1475 aaKnown RBP22.51■■□□□ 1.19
MBD1-225ENST00000591535 ASXL2Q76L83 1435 aa22.51■■□□□ 1.19
MBD1-225ENST00000591535 ATP10BO94823 1461 aa22.5■■□□□ 1.19
MBD1-225ENST00000591535 HECW1Q76N89 1606 aa22.47■■□□□ 1.19
MBD1-225ENST00000591535 FAM69CQ0P6D2 419 aa22.46■■□□□ 1.19
MBD1-225ENST00000591535 CASKIN1Q8WXD9 1431 aa22.44■■□□□ 1.18
MBD1-225ENST00000591535 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
MBD1-225ENST00000591535 ABCC10Q5T3U5 1492 aa22.43■■□□□ 1.18
MBD1-225ENST00000591535 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
MBD1-225ENST00000591535 WDR7Q9Y4E6 1490 aa22.42■■□□□ 1.18
MBD1-225ENST00000591535 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
MBD1-225ENST00000591535 DIP2BQ9P265 1576 aa22.4■■□□□ 1.18
MBD1-225ENST00000591535 EPRSP07814 1512 aaKnown RBP22.4■■□□□ 1.18
MBD1-225ENST00000591535 CDK13Q14004 1512 aaKnown RBP22.4■■□□□ 1.18
MBD1-225ENST00000591535 PLEKHD1A6NEE1 506 aa22.39■■□□□ 1.18
MBD1-225ENST00000591535 FYCO1Q9BQS8 1478 aa22.39■■□□□ 1.17
MBD1-225ENST00000591535 CDK11AQ9UQ88 783 aaPredicted RBP22.35■■□□□ 1.17
MBD1-225ENST00000591535 LRRIQ1Q96JM4 1722 aa22.35■■□□□ 1.17
MBD1-225ENST00000591535 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.17
MBD1-225ENST00000591535 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
MBD1-225ENST00000591535 GLI2P10070 1586 aa22.3■■□□□ 1.16
MBD1-225ENST00000591535 TSPOAP1O95153 1857 aa22.3■■□□□ 1.16
MBD1-225ENST00000591535 MAP3K4Q9Y6R4 1608 aa22.22■■□□□ 1.15
MBD1-225ENST00000591535 CD109Q6YHK3 1445 aa22.22■■□□□ 1.15
MBD1-225ENST00000591535 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
MBD1-225ENST00000591535 TROQ12816 1431 aaPredicted RBP22.21■■□□□ 1.15
MBD1-225ENST00000591535 APLP2Q06481 763 aa22.19■■□□□ 1.14
MBD1-225ENST00000591535 ABCA9Q8IUA7 1624 aa22.19■■□□□ 1.14
MBD1-225ENST00000591535 MTUS2Q5JR59 1369 aa22.17■■□□□ 1.14
MBD1-225ENST00000591535 MAGI3Q5TCQ9 1506 aa22.17■■□□□ 1.14
MBD1-225ENST00000591535 KIF14Q15058 1648 aa22.16■■□□□ 1.14
MBD1-225ENST00000591535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.15■■□□□ 1.14
MBD1-225ENST00000591535 PPRC1Q5VV67 1664 aaKnown RBP22.14■■□□□ 1.13
MBD1-225ENST00000591535 TEX14Q8IWB6 1497 aa22.14■■□□□ 1.13
MBD1-225ENST00000591535 TIAM1Q13009 1591 aa22.14■■□□□ 1.13
MBD1-225ENST00000591535 TTC37Q6PGP7 1564 aa22.13■■□□□ 1.13
MBD1-225ENST00000591535 EHBP1L1Q8N3D4 1523 aa22.08■■□□□ 1.13
MBD1-225ENST00000591535 MAP3K1Q13233 1512 aa22.07■■□□□ 1.12
MBD1-225ENST00000591535 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
MBD1-225ENST00000591535 KANK4Q5T7N3 995 aaPredicted RBP22.05■■□□□ 1.12
MBD1-225ENST00000591535 LRRC9Q6ZRR7 1453 aa22.04■■□□□ 1.12
MBD1-225ENST00000591535 PLCH2O75038 1416 aa22.04■■□□□ 1.12
MBD1-225ENST00000591535 KDM6BO15054 1643 aa22.03■■□□□ 1.12
MBD1-225ENST00000591535 FANCAO15360 1455 aa22.01■■□□□ 1.11
MBD1-225ENST00000591535 SUPT6HQ7KZ85 1726 aaKnown RBP22■■□□□ 1.11
MBD1-225ENST00000591535 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
MBD1-225ENST00000591535 EFCAB2Q5VUJ9 269 aa22■■□□□ 1.11
MBD1-225ENST00000591535 ARHGAP5Q13017 1502 aa22■■□□□ 1.11
MBD1-225ENST00000591535 NEO1Q92859 1461 aa21.99■■□□□ 1.11
MBD1-225ENST00000591535 CFAP74Q9C0B2 1584 aa21.98■■□□□ 1.11
MBD1-225ENST00000591535 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
MBD1-225ENST00000591535 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms