RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 TIAM1Q13009 1591 aa28.45■■■□□ 2.14
GCDH-216ENST00000591470 FHAD1B1AJZ9 1412 aa28.44■■■□□ 2.14
GCDH-216ENST00000591470 HNRNPUL2Q1KMD3 747 aaKnown RBP28.44■■■□□ 2.14
GCDH-216ENST00000591470 RRBP1Q9P2E9 1410 aaKnown RBP28.43■■■□□ 2.14
GCDH-216ENST00000591470 PCF11O94913 1555 aaKnown RBP28.37■■■□□ 2.13
GCDH-216ENST00000591470 CFAP43Q8NDM7 1665 aa28.36■■■□□ 2.13
GCDH-216ENST00000591470 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
GCDH-216ENST00000591470 AQRO60306 1485 aaKnown RBP eCLIP28.33■■■□□ 2.131e-6■■■■■ 36.8
GCDH-216ENST00000591470 FHOD3Q2V2M9 1422 aa28.32■■■□□ 2.12
GCDH-216ENST00000591470 LRRC9Q6ZRR7 1453 aa28.3■■■□□ 2.12
GCDH-216ENST00000591470 WDR62O43379 1518 aa28.3■■■□□ 2.12
GCDH-216ENST00000591470 FYCO1Q9BQS8 1478 aa28.3■■■□□ 2.12
GCDH-216ENST00000591470 SAMD9Q5K651 1589 aa28.29■■■□□ 2.12
GCDH-216ENST00000591470 CASKIN1Q8WXD9 1431 aa28.27■■■□□ 2.12
GCDH-216ENST00000591470 CCNB3Q8WWL7 1395 aa28.25■■■□□ 2.11
GCDH-216ENST00000591470 P3H3Q8IVL6 736 aa28.24■■■□□ 2.11
GCDH-216ENST00000591470 ADAMTS12P58397 1594 aa28.22■■■□□ 2.11
GCDH-216ENST00000591470 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
GCDH-216ENST00000591470 FMN1Q68DA7 1419 aa28.21■■■□□ 2.11
GCDH-216ENST00000591470 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
GCDH-216ENST00000591470 SNAPC4Q5SXM2 1469 aa28.17■■■□□ 2.1
GCDH-216ENST00000591470 PHLDB1Q86UU1 1377 aa28.09■■■□□ 2.09
GCDH-216ENST00000591470 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.09
GCDH-216ENST00000591470 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
GCDH-216ENST00000591470 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
GCDH-216ENST00000591470 CLSPNQ9HAW4 1339 aa28.06■■■□□ 2.08
GCDH-216ENST00000591470 IQGAP2Q13576 1575 aa28.05■■■□□ 2.08
GCDH-216ENST00000591470 DHX57Q6P158 1386 aaKnown RBP28.05■■■□□ 2.08
GCDH-216ENST00000591470 LRRIQ1Q96JM4 1722 aa28.03■■■□□ 2.08
GCDH-216ENST00000591470 ATP1B4Q9UN42 357 aaPredicted RBP28.01■■■□□ 2.07
GCDH-216ENST00000591470 EIF4G3O43432 1585 aaKnown RBP28■■■□□ 2.07
GCDH-216ENST00000591470 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
GCDH-216ENST00000591470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.94■■■□□ 2.06
GCDH-216ENST00000591470 KIAA0586Q9BVV6 1533 aa27.87■■■□□ 2.05
GCDH-216ENST00000591470 CCDC18Q5T9S5 1454 aa27.87■■■□□ 2.05
GCDH-216ENST00000591470 HECW1Q76N89 1606 aa27.87■■■□□ 2.05
GCDH-216ENST00000591470 ITGAEP38570 1179 aa27.87■■■□□ 2.05
GCDH-216ENST00000591470 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
GCDH-216ENST00000591470 EHBP1L1Q8N3D4 1523 aa27.86■■■□□ 2.05
GCDH-216ENST00000591470 GRIN2AQ12879 1464 aa27.86■■■□□ 2.05
GCDH-216ENST00000591470 MAGI1Q96QZ7 1491 aaPredicted RBP27.85■■■□□ 2.05
GCDH-216ENST00000591470 RAB3GAP2Q9H2M9 1393 aa27.84■■■□□ 2.05
GCDH-216ENST00000591470 ZNF316A6NFI3 1004 aaPredicted RBP27.84■■■□□ 2.05
GCDH-216ENST00000591470 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
GCDH-216ENST00000591470 FGD6Q6ZV73 1430 aa27.83■■■□□ 2.05
GCDH-216ENST00000591470 SUPT6HQ7KZ85 1726 aaKnown RBP27.82■■■□□ 2.04
GCDH-216ENST00000591470 FAM50AQ14320 339 aaKnown RBP27.82■■■□□ 2.04
GCDH-216ENST00000591470 NCOA2Q15596 1464 aa27.79■■■□□ 2.04
GCDH-216ENST00000591470 ARHGEF11O15085 1522 aa27.78■■■□□ 2.04
GCDH-216ENST00000591470 DIEXFQ68CQ4 756 aaKnown RBP27.78■■■□□ 2.04
GCDH-216ENST00000591470 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
GCDH-216ENST00000591470 MAGI3Q5TCQ9 1506 aa27.77■■■□□ 2.04
GCDH-216ENST00000591470 DISP1Q96F81 1524 aa27.76■■■□□ 2.03
GCDH-216ENST00000591470 SYNJ2O15056 1496 aa27.75■■■□□ 2.03
GCDH-216ENST00000591470 EPRSP07814 1512 aaKnown RBP27.74■■■□□ 2.03
GCDH-216ENST00000591470 MYOM3Q5VTT5 1437 aa27.74■■■□□ 2.03
GCDH-216ENST00000591470 MAPKBP1O60336 1514 aa27.7■■■□□ 2.03
GCDH-216ENST00000591470 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
GCDH-216ENST00000591470 CDK13Q14004 1512 aaKnown RBP27.64■■■□□ 2.01
GCDH-216ENST00000591470 PTPN23Q9H3S7 1636 aa27.63■■■□□ 2.01
GCDH-216ENST00000591470 NUP160Q12769 1436 aa27.62■■■□□ 2.01
GCDH-216ENST00000591470 CHMP7Q8WUX9 453 aaPredicted RBP27.61■■■□□ 2.01
GCDH-216ENST00000591470 TCOF1Q13428 1488 aaKnown RBP27.6■■■□□ 2.01
GCDH-216ENST00000591470 RAPGEF6Q8TEU7 1601 aa27.6■■■□□ 2.01
GCDH-216ENST00000591470 PTPRKQ15262 1439 aa27.58■■■□□ 2.01
GCDH-216ENST00000591470 HFM1A2PYH4 1435 aa27.56■■■□□ 2
GCDH-216ENST00000591470 NUP153P49790 1475 aaKnown RBP27.56■■■□□ 2
GCDH-216ENST00000591470 MIA2Q96PC5 1412 aa27.52■■■□□ 2
GCDH-216ENST00000591470 NAIPQ13075 1403 aa27.46■■□□□ 1.99
GCDH-216ENST00000591470 CARMIL2Q6F5E8 1435 aa27.45■■□□□ 1.99
GCDH-216ENST00000591470 FBLN2P98095 1184 aa27.44■■□□□ 1.98
GCDH-216ENST00000591470 JPH4Q96JJ6 628 aa27.41■■□□□ 1.98
GCDH-216ENST00000591470 AKNAQ7Z591 1439 aa27.41■■□□□ 1.98
GCDH-216ENST00000591470 UACAQ9BZF9 1416 aa27.41■■□□□ 1.98
GCDH-216ENST00000591470 GCC2Q8IWJ2 1684 aa27.41■■□□□ 1.98
GCDH-216ENST00000591470 PLB1Q6P1J6 1458 aa27.38■■□□□ 1.97
GCDH-216ENST00000591470 ARID3CA6NKF2 412 aa27.38■■□□□ 1.97
GCDH-216ENST00000591470 TIMELESSQ9UNS1 1208 aa27.36■■□□□ 1.97
GCDH-216ENST00000591470 CDK11AQ9UQ88 783 aaPredicted RBP27.36■■□□□ 1.97
GCDH-216ENST00000591470 TROQ12816 1431 aaPredicted RBP27.34■■□□□ 1.97
GCDH-216ENST00000591470 ADCY10Q96PN6 1610 aa27.33■■□□□ 1.97
GCDH-216ENST00000591470 ABCA8O94911 1581 aa27.33■■□□□ 1.96
GCDH-216ENST00000591470 SIN3AQ96ST3 1273 aa27.31■■□□□ 1.96
GCDH-216ENST00000591470 DNMT1P26358 1616 aaKnown RBP27.28■■□□□ 1.96
GCDH-216ENST00000591470 PRG4Q92954 1404 aaPredicted RBP27.27■■□□□ 1.96
GCDH-216ENST00000591470 ITSN2Q9NZM3 1697 aa27.26■■□□□ 1.95
GCDH-216ENST00000591470 CHD1O14646 1710 aa27.26■■□□□ 1.95
GCDH-216ENST00000591470 MIER1Q8N108 512 aa27.24■■□□□ 1.95
GCDH-216ENST00000591470 DAPK1P53355 1430 aa27.24■■□□□ 1.95
GCDH-216ENST00000591470 NEUROD1Q13562 356 aa27.23■■□□□ 1.95
GCDH-216ENST00000591470 ROCK1Q13464 1354 aa27.23■■□□□ 1.95
GCDH-216ENST00000591470 KIF14Q15058 1648 aa27.21■■□□□ 1.95
GCDH-216ENST00000591470 RRP7BPQ9NSQ0 103 aa27.21■■□□□ 1.95
GCDH-216ENST00000591470 KDM6BO15054 1643 aa27.2■■□□□ 1.94
GCDH-216ENST00000591470 ABCC5O15440 1437 aa27.2■■□□□ 1.94
GCDH-216ENST00000591470 CHIC2Q9UKJ5 165 aa27.19■■□□□ 1.94
GCDH-216ENST00000591470 GPATCH8Q9UKJ3 1502 aaKnown RBP27.18■■□□□ 1.94
GCDH-216ENST00000591470 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
GCDH-216ENST00000591470 ATP10BO94823 1461 aa27.16■■□□□ 1.94
GCDH-216ENST00000591470 ACIN1Q9UKV3 1341 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms