RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 WDR97A6NE52 1622 aa21.33■■□□□ 1
PRKCSH-212ENST00000591462 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
PRKCSH-212ENST00000591462 GAPVD1Q14C86 1478 aa21.24■□□□□ 0.99
PRKCSH-212ENST00000591462 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
PRKCSH-212ENST00000591462 RANGAP1P46060 587 aaPredicted RBP21.19■□□□□ 0.98
PRKCSH-212ENST00000591462 APLP2Q06481 763 aa21.18■□□□□ 0.98
PRKCSH-212ENST00000591462 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
PRKCSH-212ENST00000591462 GRIN2BQ13224 1484 aa21.16■□□□□ 0.98
PRKCSH-212ENST00000591462 PBRM1Q86U86 1689 aa21.16■□□□□ 0.98
PRKCSH-212ENST00000591462 FBLN2P98095 1184 aa21.14■□□□□ 0.98
PRKCSH-212ENST00000591462 KIF27Q86VH2 1401 aa21.11■□□□□ 0.97
PRKCSH-212ENST00000591462 DHX57Q6P158 1386 aaKnown RBP21.08■□□□□ 0.96
PRKCSH-212ENST00000591462 ARAP1Q96P48 1450 aa21.08■□□□□ 0.96
PRKCSH-212ENST00000591462 PRXQ9BXM0 1461 aa21.06■□□□□ 0.96
PRKCSH-212ENST00000591462 IGF1RP08069 1367 aa21.05■□□□□ 0.96
PRKCSH-212ENST00000591462 MAGI1Q96QZ7 1491 aaPredicted RBP21.05■□□□□ 0.96
PRKCSH-212ENST00000591462 ERICH3Q5RHP9 1530 aa21.05■□□□□ 0.96
PRKCSH-212ENST00000591462 CHD1O14646 1710 aa21.05■□□□□ 0.96
PRKCSH-212ENST00000591462 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
PRKCSH-212ENST00000591462 CLSPNQ9HAW4 1339 aa21.03■□□□□ 0.96
PRKCSH-212ENST00000591462 KANK4Q5T7N3 995 aaPredicted RBP21.02■□□□□ 0.96
PRKCSH-212ENST00000591462 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
PRKCSH-212ENST00000591462 SYNJ2O15056 1496 aa21■□□□□ 0.95
PRKCSH-212ENST00000591462 OSCARQ8IYS5 282 aa20.98■□□□□ 0.95
PRKCSH-212ENST00000591462 FHAD1B1AJZ9 1412 aa20.96■□□□□ 0.95
PRKCSH-212ENST00000591462 MYT1Q01538 1121 aa20.95■□□□□ 0.94
PRKCSH-212ENST00000591462 RRBP1Q9P2E9 1410 aaKnown RBP20.94■□□□□ 0.94
PRKCSH-212ENST00000591462 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
PRKCSH-212ENST00000591462 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
PRKCSH-212ENST00000591462 DNAJC5Q9H3Z4 198 aa20.9■□□□□ 0.94
PRKCSH-212ENST00000591462 CUL7Q14999 1698 aa20.88■□□□□ 0.93
PRKCSH-212ENST00000591462 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
PRKCSH-212ENST00000591462 ARHGAP35Q9NRY4 1499 aa20.83■□□□□ 0.93
PRKCSH-212ENST00000591462 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
PRKCSH-212ENST00000591462 NUP160Q12769 1436 aa20.8■□□□□ 0.92
PRKCSH-212ENST00000591462 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-212ENST00000591462 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
PRKCSH-212ENST00000591462 ITGAEP38570 1179 aa20.72■□□□□ 0.91
PRKCSH-212ENST00000591462 MAPKBP1O60336 1514 aa20.71■□□□□ 0.91
PRKCSH-212ENST00000591462 RAB3GAP2Q9H2M9 1393 aa20.69■□□□□ 0.9
PRKCSH-212ENST00000591462 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
PRKCSH-212ENST00000591462 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
PRKCSH-212ENST00000591462 TIAM1Q13009 1591 aa20.65■□□□□ 0.9
PRKCSH-212ENST00000591462 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
PRKCSH-212ENST00000591462 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
PRKCSH-212ENST00000591462 KIAA0586Q9BVV6 1533 aa20.64■□□□□ 0.9
PRKCSH-212ENST00000591462 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
PRKCSH-212ENST00000591462 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
PRKCSH-212ENST00000591462 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
PRKCSH-212ENST00000591462 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
PRKCSH-212ENST00000591462 SHROOM2Q13796 1616 aa20.59■□□□□ 0.89
PRKCSH-212ENST00000591462 PRG4Q92954 1404 aaPredicted RBP20.59■□□□□ 0.89
PRKCSH-212ENST00000591462 IQGAP2Q13576 1575 aa20.58■□□□□ 0.89
PRKCSH-212ENST00000591462 LRRC9Q6ZRR7 1453 aa20.57■□□□□ 0.88
PRKCSH-212ENST00000591462 SETD5Q9C0A6 1442 aa20.57■□□□□ 0.88
PRKCSH-212ENST00000591462 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
PRKCSH-212ENST00000591462 CTTNBP2Q8WZ74 1663 aa20.56■□□□□ 0.88
PRKCSH-212ENST00000591462 CYB5RLQ6IPT4 315 aa20.54■□□□□ 0.88
PRKCSH-212ENST00000591462 TSHZ2Q9NRE2 1034 aa20.54■□□□□ 0.88
PRKCSH-212ENST00000591462 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
PRKCSH-212ENST00000591462 DISP1Q96F81 1524 aa20.47■□□□□ 0.87
PRKCSH-212ENST00000591462 P3H3Q8IVL6 736 aa20.47■□□□□ 0.87
PRKCSH-212ENST00000591462 CFAP43Q8NDM7 1665 aa20.47■□□□□ 0.87
PRKCSH-212ENST00000591462 UGGT2Q9NYU1 1516 aa20.46■□□□□ 0.87
PRKCSH-212ENST00000591462 PCF11O94913 1555 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-212ENST00000591462 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-212ENST00000591462 FAM50AQ14320 339 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-212ENST00000591462 PPP1R15AO75807 674 aaPredicted RBP20.41■□□□□ 0.86
PRKCSH-212ENST00000591462 KIAA0556O60303 1618 aa20.4■□□□□ 0.86
PRKCSH-212ENST00000591462 CARMIL2Q6F5E8 1435 aa20.4■□□□□ 0.86
PRKCSH-212ENST00000591462 BCANQ96GW7 911 aa20.36■□□□□ 0.85
PRKCSH-212ENST00000591462 HIRIP3Q9BW71 556 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-212ENST00000591462 PTPRGP23470 1445 aa20.34■□□□□ 0.85
PRKCSH-212ENST00000591462 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
PRKCSH-212ENST00000591462 TIMELESSQ9UNS1 1208 aa20.34■□□□□ 0.85
PRKCSH-212ENST00000591462 FKBP8Q14318 412 aa20.33■□□□□ 0.84
PRKCSH-212ENST00000591462 SAMD9Q5K651 1589 aa20.32■□□□□ 0.84
PRKCSH-212ENST00000591462 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
PRKCSH-212ENST00000591462 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
PRKCSH-212ENST00000591462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.28■□□□□ 0.84
PRKCSH-212ENST00000591462 CASKIN1Q8WXD9 1431 aa20.28■□□□□ 0.84
PRKCSH-212ENST00000591462 PLB1Q6P1J6 1458 aa20.26■□□□□ 0.83
PRKCSH-212ENST00000591462 CCER2I3L3R5 266 aa20.25■□□□□ 0.83
PRKCSH-212ENST00000591462 EFCAB5A4FU69 1503 aa20.25■□□□□ 0.83
PRKCSH-212ENST00000591462 ANP32EQ9BTT0 268 aa20.25■□□□□ 0.83
PRKCSH-212ENST00000591462 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
PRKCSH-212ENST00000591462 ARID3CA6NKF2 412 aa20.23■□□□□ 0.83
PRKCSH-212ENST00000591462 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
PRKCSH-212ENST00000591462 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
PRKCSH-212ENST00000591462 PTPRKQ15262 1439 aa20.21■□□□□ 0.83
PRKCSH-212ENST00000591462 UACAQ9BZF9 1416 aa20.2■□□□□ 0.82
PRKCSH-212ENST00000591462 ANP32CO43423 234 aa20.2■□□□□ 0.82
PRKCSH-212ENST00000591462 CCDC18Q5T9S5 1454 aa20.19■□□□□ 0.82
PRKCSH-212ENST00000591462 TONSLQ96HA7 1378 aa20.17■□□□□ 0.82
PRKCSH-212ENST00000591462 HFM1A2PYH4 1435 aa20.15■□□□□ 0.82
PRKCSH-212ENST00000591462 PTPN23Q9H3S7 1636 aa20.15■□□□□ 0.82
PRKCSH-212ENST00000591462 ABCA8O94911 1581 aa20.15■□□□□ 0.82
PRKCSH-212ENST00000591462 ABCC2Q92887 1545 aa20.15■□□□□ 0.82
PRKCSH-212ENST00000591462 NEFLP07196 543 aa20.12■□□□□ 0.81
PRKCSH-212ENST00000591462 FMN1Q68DA7 1419 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms