RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 RIMBP3BA6NNM3 1639 aa35.15■■■■□ 3.22
CIRBP-229ENST00000590704 RIMBP3Q9UFD9 1639 aa35.15■■■■□ 3.22
CIRBP-229ENST00000590704 KIAA0586Q9BVV6 1533 aa35.14■■■■□ 3.22
CIRBP-229ENST00000590704 SHROOM2Q13796 1616 aa35.12■■■■□ 3.21
CIRBP-229ENST00000590704 JPH4Q96JJ6 628 aa35.09■■■■□ 3.21
CIRBP-229ENST00000590704 ERCC6L2Q5T890 1561 aa35.06■■■■□ 3.2
CIRBP-229ENST00000590704 ARAP1Q96P48 1450 aa34.97■■■■□ 3.19
CIRBP-229ENST00000590704 KIF21BO75037 1637 aa34.96■■■■□ 3.19
CIRBP-229ENST00000590704 PRG4Q92954 1404 aaPredicted RBP34.95■■■■□ 3.19
CIRBP-229ENST00000590704 IQGAP2Q13576 1575 aa34.92■■■■□ 3.18
CIRBP-229ENST00000590704 CTTNBP2Q8WZ74 1663 aa34.85■■■■□ 3.17
CIRBP-229ENST00000590704 CYB5RLQ6IPT4 315 aa34.85■■■■□ 3.17
CIRBP-229ENST00000590704 UGGT2Q9NYU1 1516 aa34.83■■■■□ 3.17
CIRBP-229ENST00000590704 DISP1Q96F81 1524 aa34.8■■■■□ 3.16
CIRBP-229ENST00000590704 EHMT2Q96KQ7 1210 aa34.74■■■■□ 3.15
CIRBP-229ENST00000590704 GOLGA3Q08378 1498 aa34.74■■■■□ 3.15
CIRBP-229ENST00000590704 CARMIL2Q6F5E8 1435 aa34.63■■■■□ 3.13
CIRBP-229ENST00000590704 KIAA0556O60303 1618 aa34.62■■■■□ 3.13
CIRBP-229ENST00000590704 UBTFP17480 764 aaKnown RBP34.61■■■■□ 3.13
CIRBP-229ENST00000590704 TNIKQ9UKE5 1360 aa34.59■■■■□ 3.13
CIRBP-229ENST00000590704 PTPRGP23470 1445 aa34.55■■■■□ 3.12
CIRBP-229ENST00000590704 SAMD9Q5K651 1589 aa34.53■■■■□ 3.12
CIRBP-229ENST00000590704 P3H3Q8IVL6 736 aa34.47■■■■□ 3.11
CIRBP-229ENST00000590704 LOC105371045A0A1W2PR82 267 aa34.46■■■■□ 3.11
CIRBP-229ENST00000590704 RANGAP1P46060 587 aaPredicted RBP34.46■■■■□ 3.11
CIRBP-229ENST00000590704 TTBK1Q5TCY1 1321 aaPredicted RBP34.44■■■■□ 3.1
CIRBP-229ENST00000590704 ADCY10Q96PN6 1610 aa34.41■■■■□ 3.1
CIRBP-229ENST00000590704 ARHGAP35Q9NRY4 1499 aa34.36■■■■□ 3.09
CIRBP-229ENST00000590704 UACAQ9BZF9 1416 aa34.34■■■■□ 3.09
CIRBP-229ENST00000590704 FHOD3Q2V2M9 1422 aa34.33■■■■□ 3.09
CIRBP-229ENST00000590704 EFCAB5A4FU69 1503 aa34.33■■■■□ 3.09
CIRBP-229ENST00000590704 PLB1Q6P1J6 1458 aa34.33■■■■□ 3.09
CIRBP-229ENST00000590704 UHRF1BP1LA0JNW5 1464 aa34.32■■■■□ 3.08
CIRBP-229ENST00000590704 ABCA8O94911 1581 aa34.29■■■■□ 3.08
CIRBP-229ENST00000590704 ABCC2Q92887 1545 aa34.25■■■■□ 3.07
CIRBP-229ENST00000590704 KDM5BQ9UGL1 1544 aa34.17■■■■□ 3.06
CIRBP-229ENST00000590704 CLIP1P30622 1438 aa34.15■■■■□ 3.06
CIRBP-229ENST00000590704 CEP162Q5TB80 1403 aa34.09■■■■□ 3.05
CIRBP-229ENST00000590704 MAPKBP1O60336 1514 aa34.08■■■■□ 3.05
CIRBP-229ENST00000590704 NPM1P06748 294 aaKnown RBP eCLIP34.07■■■■□ 3.05
CIRBP-229ENST00000590704 RAPGEF6Q8TEU7 1601 aa34.07■■■■□ 3.05
CIRBP-229ENST00000590704 ATP10BO94823 1461 aa34.05■■■■□ 3.04
CIRBP-229ENST00000590704 NUP153P49790 1475 aaKnown RBP34.05■■■■□ 3.04
CIRBP-229ENST00000590704 ZCCHC11Q5TAX3 1644 aaKnown RBP34.04■■■■□ 3.04
CIRBP-229ENST00000590704 FMN1Q68DA7 1419 aa34.01■■■■□ 3.03
CIRBP-229ENST00000590704 ASXL2Q76L83 1435 aa33.98■■■■□ 3.03
CIRBP-229ENST00000590704 ARID3CA6NKF2 412 aa33.96■■■■□ 3.03
CIRBP-229ENST00000590704 ABCC10Q5T3U5 1492 aa33.92■■■■□ 3.02
CIRBP-229ENST00000590704 TRHP20396 242 aaPredicted RBP33.91■■■■□ 3.02
CIRBP-229ENST00000590704 KIF13AQ9H1H9 1805 aa33.87■■■■□ 3.01
CIRBP-229ENST00000590704 CASKIN1Q8WXD9 1431 aa33.86■■■■□ 3.01
CIRBP-229ENST00000590704 DIP2BQ9P265 1576 aa33.85■■■■□ 3.01
CIRBP-229ENST00000590704 PCF11O94913 1555 aaKnown RBP33.84■■■■□ 3.01
CIRBP-229ENST00000590704 LRRIQ1Q96JM4 1722 aa33.83■■■■□ 3.01
CIRBP-229ENST00000590704 EPRSP07814 1512 aaKnown RBP33.82■■■■□ 3
CIRBP-229ENST00000590704 CDK13Q14004 1512 aaKnown RBP33.82■■■■□ 3
CIRBP-229ENST00000590704 WDR7Q9Y4E6 1490 aa33.81■■■■□ 3
CIRBP-229ENST00000590704 FAM69CQ0P6D2 419 aa33.81■■■■□ 3
CIRBP-229ENST00000590704 HECW1Q76N89 1606 aa33.78■■■■□ 3
CIRBP-229ENST00000590704 ATP1B4Q9UN42 357 aaPredicted RBP33.76■■■□□ 2.99
CIRBP-229ENST00000590704 GLI2P10070 1586 aa33.74■■■□□ 2.99
CIRBP-229ENST00000590704 FYCO1Q9BQS8 1478 aa33.73■■■□□ 2.99
CIRBP-229ENST00000590704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.7■■■□□ 2.99
CIRBP-229ENST00000590704 HNRNPUL2Q1KMD3 747 aaKnown RBP33.7■■■□□ 2.99
CIRBP-229ENST00000590704 KCNH8Q96L42 1107 aa33.69■■■□□ 2.98
CIRBP-229ENST00000590704 VPS8Q8N3P4 1428 aa33.66■■■□□ 2.98
CIRBP-229ENST00000590704 PLEKHD1A6NEE1 506 aa33.64■■■□□ 2.98
CIRBP-229ENST00000590704 MAGI3Q5TCQ9 1506 aa33.6■■■□□ 2.97
CIRBP-229ENST00000590704 MAP3K4Q9Y6R4 1608 aa33.59■■■□□ 2.97
CIRBP-229ENST00000590704 CCDC18Q5T9S5 1454 aa33.59■■■□□ 2.97
CIRBP-229ENST00000590704 PPRC1Q5VV67 1664 aaKnown RBP33.57■■■□□ 2.96
CIRBP-229ENST00000590704 TROQ12816 1431 aaPredicted RBP33.52■■■□□ 2.96
CIRBP-229ENST00000590704 ABCA9Q8IUA7 1624 aa33.52■■■□□ 2.96
CIRBP-229ENST00000590704 TSPOAP1O95153 1857 aa33.51■■■□□ 2.95
CIRBP-229ENST00000590704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.49■■■□□ 2.95
CIRBP-229ENST00000590704 CDK11AQ9UQ88 783 aaPredicted RBP33.49■■■□□ 2.95
CIRBP-229ENST00000590704 CD109Q6YHK3 1445 aa33.48■■■□□ 2.95
CIRBP-229ENST00000590704 CFAP43Q8NDM7 1665 aa33.47■■■□□ 2.95
CIRBP-229ENST00000590704 KIF14Q15058 1648 aa33.44■■■□□ 2.94
CIRBP-229ENST00000590704 TTC37Q6PGP7 1564 aa33.41■■■□□ 2.94
CIRBP-229ENST00000590704 TIAM1Q13009 1591 aa33.37■■■□□ 2.93
CIRBP-229ENST00000590704 MAP3K1Q13233 1512 aa33.35■■■□□ 2.93
CIRBP-229ENST00000590704 COL17A1Q9UMD9 1497 aaPredicted RBP33.34■■■□□ 2.93
CIRBP-229ENST00000590704 KANK4Q5T7N3 995 aaPredicted RBP33.33■■■□□ 2.93
CIRBP-229ENST00000590704 PLCH2O75038 1416 aa33.29■■■□□ 2.92
CIRBP-229ENST00000590704 MTUS2Q5JR59 1369 aa33.28■■■□□ 2.92
CIRBP-229ENST00000590704 TEX14Q8IWB6 1497 aa33.27■■■□□ 2.92
CIRBP-229ENST00000590704 LRRC9Q6ZRR7 1453 aa33.27■■■□□ 2.92
CIRBP-229ENST00000590704 EHBP1L1Q8N3D4 1523 aa33.24■■■□□ 2.91
CIRBP-229ENST00000590704 ARAP3Q8WWN8 1544 aa33.18■■■□□ 2.9
CIRBP-229ENST00000590704 GPATCH8Q9UKJ3 1502 aaKnown RBP33.18■■■□□ 2.9
CIRBP-229ENST00000590704 NEO1Q92859 1461 aa33.18■■■□□ 2.9
CIRBP-229ENST00000590704 CDC42BPBQ9Y5S2 1711 aa33.17■■■□□ 2.9
CIRBP-229ENST00000590704 FANCAO15360 1455 aa33.16■■■□□ 2.9
CIRBP-229ENST00000590704 MYO5CQ9NQX4 1742 aa33.16■■■□□ 2.9
CIRBP-229ENST00000590704 CDC42BPAQ5VT25 1732 aa33.15■■■□□ 2.9
CIRBP-229ENST00000590704 KDM6BO15054 1643 aa33.14■■■□□ 2.9
CIRBP-229ENST00000590704 AKNAQ7Z591 1439 aa33.13■■■□□ 2.89
CIRBP-229ENST00000590704 PHLDB1Q86UU1 1377 aa33.13■■■□□ 2.89
CIRBP-229ENST00000590704 NCOA2Q15596 1464 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms