RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 NISCHQ9Y2I1 1504 aa50.95■■■■■ 5.75
CIRBP-229ENST00000590704 CCDC180Q9P1Z9 1646 aa45.02■■■■■ 4.8
CIRBP-229ENST00000590704 ABCC9O60706 1549 aa43.85■■■■■ 4.61
CIRBP-229ENST00000590704 ZCCHC6Q5VYS8 1495 aaKnown RBP42.51■■■■■ 4.4
CIRBP-229ENST00000590704 DCAF8L2P0C7V8 631 aa42.33■■■■■ 4.37
CIRBP-229ENST00000590704 NACADO15069 1562 aa42.29■■■■■ 4.36
CIRBP-229ENST00000590704 RB1CC1Q8TDY2 1594 aa42.21■■■■■ 4.35
CIRBP-229ENST00000590704 MYO15BQ96JP2 1530 aa42.21■■■■■ 4.35
CIRBP-229ENST00000590704 DCAF1Q9Y4B6 1507 aa42.15■■■■■ 4.34
CIRBP-229ENST00000590704 UNC13AQ9UPW8 1703 aa41.39■■■■■ 4.22
CIRBP-229ENST00000590704 BICRAQ9NZM4 1560 aa41.15■■■■■ 4.18
CIRBP-229ENST00000590704 SCRIBQ14160 1630 aa41.14■■■■■ 4.18
CIRBP-229ENST00000590704 PABPN1Q86U42 306 aaKnown RBP eCLIP41.1■■■■■ 4.17
CIRBP-229ENST00000590704 SHROOM4Q9ULL8 1493 aa40.51■■■■■ 4.08
CIRBP-229ENST00000590704 DNAJC5BQ9UF47 199 aa40.23■■■■■ 4.03
CIRBP-229ENST00000590704 EIF4G1Q04637 1599 aaKnown RBP39.92■■■■□ 3.98
CIRBP-229ENST00000590704 CECR2Q9BXF3 1484 aa39.76■■■■□ 3.96
CIRBP-229ENST00000590704 CC2D2AQ9P2K1 1620 aa39.68■■■■□ 3.94
CIRBP-229ENST00000590704 SMARCA4P51532 1647 aa39.42■■■■□ 3.9
CIRBP-229ENST00000590704 BAZ1AQ9NRL2 1556 aaPredicted RBP39.37■■■■□ 3.89
CIRBP-229ENST00000590704 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
CIRBP-229ENST00000590704 ATAD2BQ9ULI0 1458 aa39.19■■■■□ 3.86
CIRBP-229ENST00000590704 NCAPD3P42695 1498 aa39.13■■■■□ 3.85
CIRBP-229ENST00000590704 PEG3Q9GZU2 1588 aa39.08■■■■□ 3.85
CIRBP-229ENST00000590704 SMARCA2P51531 1590 aa39.02■■■■□ 3.84
CIRBP-229ENST00000590704 RSF1Q96T23 1441 aaPredicted RBP39■■■■□ 3.83
CIRBP-229ENST00000590704 WIZO95785 1651 aa38.87■■■■□ 3.81
CIRBP-229ENST00000590704 HMGXB3Q12766 1538 aa38.87■■■■□ 3.81
CIRBP-229ENST00000590704 BAZ1BQ9UIG0 1483 aaKnown RBP38.76■■■■□ 3.8
CIRBP-229ENST00000590704 TOP2AP11388 1531 aaKnown RBP38.4■■■■□ 3.74
CIRBP-229ENST00000590704 SUPT5HO00267 1087 aaKnown RBP38.13■■■■□ 3.69
CIRBP-229ENST00000590704 NESP48681 1621 aa38.12■■■■□ 3.69
CIRBP-229ENST00000590704 CCDC88BA6NC98 1476 aa38.05■■■■□ 3.68
CIRBP-229ENST00000590704 CADPSQ9ULU8 1353 aa37.98■■■■□ 3.67
CIRBP-229ENST00000590704 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
CIRBP-229ENST00000590704 CFTRP13569 1480 aa37.83■■■■□ 3.65
CIRBP-229ENST00000590704 PDS5BQ9NTI5 1447 aa37.64■■■■□ 3.62
CIRBP-229ENST00000590704 ERCC6Q03468 1493 aa37.61■■■■□ 3.61
CIRBP-229ENST00000590704 KIF21AQ7Z4S6 1674 aa37.57■■■■□ 3.6
CIRBP-229ENST00000590704 FANCD2Q9BXW9 1451 aa37.49■■■■□ 3.59
CIRBP-229ENST00000590704 PRDM2Q13029 1718 aa37.41■■■■□ 3.58
CIRBP-229ENST00000590704 THOC2Q8NI27 1593 aaKnown RBP37.4■■■■□ 3.58
CIRBP-229ENST00000590704 CEP164Q9UPV0 1460 aa37.36■■■■□ 3.57
CIRBP-229ENST00000590704 MRC2Q9UBG0 1479 aa37.27■■■■□ 3.56
CIRBP-229ENST00000590704 CUX2O14529 1486 aa37.19■■■■□ 3.54
CIRBP-229ENST00000590704 URB2Q14146 1524 aaKnown RBP37.18■■■■□ 3.54
CIRBP-229ENST00000590704 WDR62O43379 1518 aa37.17■■■■□ 3.54
CIRBP-229ENST00000590704 TOPBP1Q92547 1522 aa36.96■■■■□ 3.51
CIRBP-229ENST00000590704 DNMBPQ6XZF7 1577 aa36.88■■■■□ 3.5
CIRBP-229ENST00000590704 ABCC8Q09428 1581 aa36.86■■■■□ 3.49
CIRBP-229ENST00000590704 CUX1P39880 1505 aa36.84■■■■□ 3.49
CIRBP-229ENST00000590704 POLA1P09884 1462 aaPredicted RBP36.68■■■■□ 3.46
CIRBP-229ENST00000590704 WRNQ14191 1432 aaPredicted RBP eCLIP36.64■■■■□ 3.461e-6■■■■■ 58.5
CIRBP-229ENST00000590704 FGD5Q6ZNL6 1462 aa36.61■■■■□ 3.45
CIRBP-229ENST00000590704 DNAJC5Q9H3Z4 198 aa36.6■■■■□ 3.45
CIRBP-229ENST00000590704 SYNJ1O43426 1573 aa36.6■■■■□ 3.45
CIRBP-229ENST00000590704 IFT140Q96RY7 1462 aa36.58■■■■□ 3.45
CIRBP-229ENST00000590704 TARBP1Q13395 1621 aaKnown RBP36.57■■■■□ 3.44
CIRBP-229ENST00000590704 RAD54L2Q9Y4B4 1467 aa36.56■■■■□ 3.44
CIRBP-229ENST00000590704 TOP2BQ02880 1626 aa36.54■■■■□ 3.44
CIRBP-229ENST00000590704 BIVM-ERCC5R4GMW8 1640 aa36.53■■■■□ 3.44
CIRBP-229ENST00000590704 ZNF608Q9ULD9 1512 aaPredicted RBP36.53■■■■□ 3.44
CIRBP-229ENST00000590704 SOGA1O94964 1423 aa36.51■■■■□ 3.44
CIRBP-229ENST00000590704 AQRO60306 1485 aaKnown RBP eCLIP36.34■■■■□ 3.413e-10■■■■■ 35.8
CIRBP-229ENST00000590704 TDRD9Q8NDG6 1382 aaKnown RBP36.31■■■■□ 3.4
CIRBP-229ENST00000590704 WDR97A6NE52 1622 aa36.29■■■■□ 3.4
CIRBP-229ENST00000590704 ABCA10Q8WWZ4 1543 aa36.28■■■■□ 3.4
CIRBP-229ENST00000590704 EIF4G3O43432 1585 aaKnown RBP36.27■■■■□ 3.4
CIRBP-229ENST00000590704 ABCA5Q8WWZ7 1642 aa36.1■■■■□ 3.37
CIRBP-229ENST00000590704 GAPVD1Q14C86 1478 aa36.07■■■■□ 3.36
CIRBP-229ENST00000590704 GRIN2BQ13224 1484 aa36■■■■□ 3.35
CIRBP-229ENST00000590704 TRIM41Q8WV44 630 aa35.96■■■■□ 3.35
CIRBP-229ENST00000590704 SNAPC4Q5SXM2 1469 aa35.93■■■■□ 3.34
CIRBP-229ENST00000590704 PBRM1Q86U86 1689 aa35.92■■■■□ 3.34
CIRBP-229ENST00000590704 CHIC1Q5VXU3 224 aa35.9■■■■□ 3.34
CIRBP-229ENST00000590704 MAGI1Q96QZ7 1491 aaPredicted RBP35.86■■■■□ 3.33
CIRBP-229ENST00000590704 ERICH3Q5RHP9 1530 aa35.81■■■■□ 3.32
CIRBP-229ENST00000590704 KIF27Q86VH2 1401 aa35.81■■■■□ 3.32
CIRBP-229ENST00000590704 RUSC2Q8N2Y8 1516 aa35.8■■■■□ 3.32
CIRBP-229ENST00000590704 IGF1RP08069 1367 aa35.8■■■■□ 3.32
CIRBP-229ENST00000590704 CHD1O14646 1710 aa35.75■■■■□ 3.31
CIRBP-229ENST00000590704 OSCARQ8IYS5 282 aa35.74■■■■□ 3.31
CIRBP-229ENST00000590704 SYNJ2O15056 1496 aa35.74■■■■□ 3.31
CIRBP-229ENST00000590704 ADAMTS12P58397 1594 aa35.69■■■■□ 3.3
CIRBP-229ENST00000590704 FBLN2P98095 1184 aa35.69■■■■□ 3.3
CIRBP-229ENST00000590704 CHMP7Q8WUX9 453 aaPredicted RBP35.67■■■■□ 3.3
CIRBP-229ENST00000590704 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
CIRBP-229ENST00000590704 GRIN2AQ12879 1464 aa35.57■■■■□ 3.28
CIRBP-229ENST00000590704 CARMIL1Q5VZK9 1371 aa35.5■■■■□ 3.27
CIRBP-229ENST00000590704 CUL7Q14999 1698 aa35.47■■■■□ 3.27
CIRBP-229ENST00000590704 NUP160Q12769 1436 aa35.45■■■■□ 3.27
CIRBP-229ENST00000590704 CLASP1Q7Z460 1538 aa35.44■■■■□ 3.26
CIRBP-229ENST00000590704 CEP170Q5SW79 1584 aa35.42■■■■□ 3.26
CIRBP-229ENST00000590704 PRXQ9BXM0 1461 aa35.34■■■■□ 3.25
CIRBP-229ENST00000590704 CSRNP3Q8WYN3 585 aa35.33■■■■□ 3.25
CIRBP-229ENST00000590704 EEA1Q15075 1411 aa35.29■■■■□ 3.24
CIRBP-229ENST00000590704 RAPGEF2Q9Y4G8 1499 aa35.28■■■■□ 3.24
CIRBP-229ENST00000590704 FAM9AQ8IZU1 332 aaPredicted RBP35.24■■■■□ 3.23
CIRBP-229ENST00000590704 ARHGEF11O15085 1522 aa35.18■■■■□ 3.22
CIRBP-229ENST00000590704 RIMBP3CA6NJZ7 1639 aa35.15■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms