RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 ERICH3Q5RHP9 1530 aa26.35■■□□□ 1.81
ERCC1-211ENST00000590701 NPM1P06748 294 aaKnown RBP eCLIP26.29■■□□□ 1.8
ERCC1-211ENST00000590701 ABCC10Q5T3U5 1492 aa26.24■■□□□ 1.79
ERCC1-211ENST00000590701 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
ERCC1-211ENST00000590701 KDM4FA0A1W2PPD8 638 aa26.16■■□□□ 1.78
ERCC1-211ENST00000590701 ADCY10Q96PN6 1610 aa26.15■■□□□ 1.78
ERCC1-211ENST00000590701 DIP2BQ9P265 1576 aa26.14■■□□□ 1.78
ERCC1-211ENST00000590701 MAPKBP1O60336 1514 aa26.14■■□□□ 1.77
ERCC1-211ENST00000590701 TSPOAP1O95153 1857 aa26.13■■□□□ 1.77
ERCC1-211ENST00000590701 KDM6BO15054 1643 aa26.06■■□□□ 1.76
ERCC1-211ENST00000590701 TTBK1Q5TCY1 1321 aaPredicted RBP26.05■■□□□ 1.76
ERCC1-211ENST00000590701 IGF1RP08069 1367 aa26.03■■□□□ 1.76
ERCC1-211ENST00000590701 KIAA0586Q9BVV6 1533 aa26.03■■□□□ 1.76
ERCC1-211ENST00000590701 PTPRGP23470 1445 aa25.95■■□□□ 1.74
ERCC1-211ENST00000590701 KIF27Q86VH2 1401 aa25.89■■□□□ 1.74
ERCC1-211ENST00000590701 ILDR1Q86SU0 546 aaPredicted RBP25.89■■□□□ 1.74
ERCC1-211ENST00000590701 CUL7Q14999 1698 aa25.86■■□□□ 1.73
ERCC1-211ENST00000590701 CARMIL1Q5VZK9 1371 aa25.83■■□□□ 1.73
ERCC1-211ENST00000590701 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
ERCC1-211ENST00000590701 ASXL2Q76L83 1435 aa25.81■■□□□ 1.72
ERCC1-211ENST00000590701 ABCC2Q92887 1545 aa25.8■■□□□ 1.72
ERCC1-211ENST00000590701 PPRC1Q5VV67 1664 aaKnown RBP25.8■■□□□ 1.72
ERCC1-211ENST00000590701 CARMIL2Q6F5E8 1435 aa25.79■■□□□ 1.72
ERCC1-211ENST00000590701 PLB1Q6P1J6 1458 aa25.75■■□□□ 1.71
ERCC1-211ENST00000590701 GLI2P10070 1586 aa25.73■■□□□ 1.71
ERCC1-211ENST00000590701 COL17A1Q9UMD9 1497 aaPredicted RBP25.73■■□□□ 1.71
ERCC1-211ENST00000590701 ADGRL1O94910 1474 aa25.72■■□□□ 1.71
ERCC1-211ENST00000590701 UACAQ9BZF9 1416 aa25.7■■□□□ 1.7
ERCC1-211ENST00000590701 IQGAP2Q13576 1575 aa25.69■■□□□ 1.7
ERCC1-211ENST00000590701 UHRF1BP1LA0JNW5 1464 aa25.68■■□□□ 1.7
ERCC1-211ENST00000590701 DISP1Q96F81 1524 aa25.66■■□□□ 1.7
ERCC1-211ENST00000590701 EPRSP07814 1512 aaKnown RBP25.64■■□□□ 1.7
ERCC1-211ENST00000590701 MAP3K4Q9Y6R4 1608 aa25.59■■□□□ 1.69
ERCC1-211ENST00000590701 KDM5BQ9UGL1 1544 aa25.59■■□□□ 1.69
ERCC1-211ENST00000590701 ZCCHC11Q5TAX3 1644 aaKnown RBP25.56■■□□□ 1.68
ERCC1-211ENST00000590701 TEX14Q8IWB6 1497 aa25.52■■□□□ 1.68
ERCC1-211ENST00000590701 HECW2Q9P2P5 1572 aa25.52■■□□□ 1.68
ERCC1-211ENST00000590701 UGGT2Q9NYU1 1516 aa25.5■■□□□ 1.67
ERCC1-211ENST00000590701 KCNH8Q96L42 1107 aa25.49■■□□□ 1.67
ERCC1-211ENST00000590701 RAPGEF2Q9Y4G8 1499 aa25.48■■□□□ 1.67
ERCC1-211ENST00000590701 KIAA0556O60303 1618 aa25.47■■□□□ 1.67
ERCC1-211ENST00000590701 WDR7Q9Y4E6 1490 aa25.43■■□□□ 1.66
ERCC1-211ENST00000590701 CD109Q6YHK3 1445 aa25.39■■□□□ 1.66
ERCC1-211ENST00000590701 MAGI3Q5TCQ9 1506 aa25.32■■□□□ 1.64
ERCC1-211ENST00000590701 CFAP43Q8NDM7 1665 aa25.31■■□□□ 1.64
ERCC1-211ENST00000590701 ARID3CA6NKF2 412 aa25.29■■□□□ 1.64
ERCC1-211ENST00000590701 ABCA8O94911 1581 aa25.28■■□□□ 1.64
ERCC1-211ENST00000590701 CTTNBP2Q8WZ74 1663 aa25.28■■□□□ 1.64
ERCC1-211ENST00000590701 KIF21BO75037 1637 aa25.26■■□□□ 1.63
ERCC1-211ENST00000590701 GOLGA3Q08378 1498 aa25.23■■□□□ 1.63
ERCC1-211ENST00000590701 P3H3Q8IVL6 736 aa25.23■■□□□ 1.63
ERCC1-211ENST00000590701 FBXO41Q8TF61 875 aa25.16■■□□□ 1.62
ERCC1-211ENST00000590701 ARAP3Q8WWN8 1544 aa25.16■■□□□ 1.62
ERCC1-211ENST00000590701 RAPGEF3O95398 923 aa25.15■■□□□ 1.62
ERCC1-211ENST00000590701 ATP10BO94823 1461 aa25.14■■□□□ 1.61
ERCC1-211ENST00000590701 PTPRMP28827 1452 aa25.09■■□□□ 1.61
ERCC1-211ENST00000590701 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
ERCC1-211ENST00000590701 ADAMTSL3P82987 1691 aa25.07■■□□□ 1.6
ERCC1-211ENST00000590701 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
ERCC1-211ENST00000590701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
ERCC1-211ENST00000590701 HNRNPUL2Q1KMD3 747 aaKnown RBP25.04■■□□□ 1.6
ERCC1-211ENST00000590701 ARID4BQ4LE39 1312 aaPredicted RBP25.04■■□□□ 1.6
ERCC1-211ENST00000590701 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
ERCC1-211ENST00000590701 PHLDB1Q86UU1 1377 aa25.02■■□□□ 1.6
ERCC1-211ENST00000590701 BCORL1Q5H9F3 1711 aa24.96■■□□□ 1.59
ERCC1-211ENST00000590701 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
ERCC1-211ENST00000590701 NEO1Q92859 1461 aa24.95■■□□□ 1.58
ERCC1-211ENST00000590701 MADDQ8WXG6 1647 aa24.94■■□□□ 1.58
ERCC1-211ENST00000590701 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
ERCC1-211ENST00000590701 FRMPD1Q5SYB0 1578 aa24.93■■□□□ 1.58
ERCC1-211ENST00000590701 RAPGEF6Q8TEU7 1601 aa24.91■■□□□ 1.58
ERCC1-211ENST00000590701 HSPA2P54652 639 aa24.89■■□□□ 1.58
ERCC1-211ENST00000590701 LMTK3Q96Q04 1460 aa24.89■■□□□ 1.57
ERCC1-211ENST00000590701 PCF11O94913 1555 aaKnown RBP24.88■■□□□ 1.57
ERCC1-211ENST00000590701 SAMD9Q5K651 1589 aa24.88■■□□□ 1.57
ERCC1-211ENST00000590701 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
ERCC1-211ENST00000590701 RIMS1Q86UR5 1692 aaKnown RBP24.86■■□□□ 1.57
ERCC1-211ENST00000590701 NUP153P49790 1475 aaKnown RBP24.83■■□□□ 1.57
ERCC1-211ENST00000590701 PLEKHD1A6NEE1 506 aa24.83■■□□□ 1.57
ERCC1-211ENST00000590701 DENND4BO75064 1496 aaPredicted RBP24.82■■□□□ 1.56
ERCC1-211ENST00000590701 AKNAQ7Z591 1439 aa24.8■■□□□ 1.56
ERCC1-211ENST00000590701 RICTORQ6R327 1708 aa24.79■■□□□ 1.56
ERCC1-211ENST00000590701 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
ERCC1-211ENST00000590701 MLECQ14165 292 aa24.77■■□□□ 1.56
ERCC1-211ENST00000590701 ARHGEF40Q8TER5 1519 aa24.76■■□□□ 1.55
ERCC1-211ENST00000590701 SIGLEC1Q9BZZ2 1709 aa24.75■■□□□ 1.55
ERCC1-211ENST00000590701 FANCAO15360 1455 aa24.74■■□□□ 1.55
ERCC1-211ENST00000590701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.72■■□□□ 1.55
ERCC1-211ENST00000590701 YEATS2Q9ULM3 1422 aa24.72■■□□□ 1.55
ERCC1-211ENST00000590701 CERKQ8TCT0 537 aa24.71■■□□□ 1.55
ERCC1-211ENST00000590701 POGZQ7Z3K3 1410 aa24.69■■□□□ 1.54
ERCC1-211ENST00000590701 TTC37Q6PGP7 1564 aa24.67■■□□□ 1.54
ERCC1-211ENST00000590701 ZFYVE16Q7Z3T8 1539 aa24.66■■□□□ 1.54
ERCC1-211ENST00000590701 CFAP74Q9C0B2 1584 aa24.64■■□□□ 1.54
ERCC1-211ENST00000590701 HECW1Q76N89 1606 aa24.64■■□□□ 1.53
ERCC1-211ENST00000590701 ZMYM4Q5VZL5 1548 aa24.63■■□□□ 1.53
ERCC1-211ENST00000590701 SCAPERQ9BY12 1400 aa24.62■■□□□ 1.53
ERCC1-211ENST00000590701 CEBPAP49715 358 aaPredicted RBP24.62■■□□□ 1.53
ERCC1-211ENST00000590701 FER1L4A9Z1Z3 1794 aa24.61■■□□□ 1.53
ERCC1-211ENST00000590701 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms