RNA–Protein interactions for RNA: ENST00000590623.5

RANBP3-218, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 786 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-218ENST00000590623 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
RANBP3-218ENST00000590623 CLIP1P30622 1438 aa12.98□□□□□ -0.33
RANBP3-218ENST00000590623 CEP170Q5SW79 1584 aa12.98□□□□□ -0.33
RANBP3-218ENST00000590623 FBLN2P98095 1184 aa12.96□□□□□ -0.33
RANBP3-218ENST00000590623 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
RANBP3-218ENST00000590623 ARHGAP35Q9NRY4 1499 aa12.94□□□□□ -0.34
RANBP3-218ENST00000590623 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
RANBP3-218ENST00000590623 IQGAP2Q13576 1575 aa12.92□□□□□ -0.34
RANBP3-218ENST00000590623 NUP160Q12769 1436 aa12.91□□□□□ -0.34
RANBP3-218ENST00000590623 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
RANBP3-218ENST00000590623 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
RANBP3-218ENST00000590623 SAMD9Q5K651 1589 aa12.88□□□□□ -0.35
RANBP3-218ENST00000590623 FHOD3Q2V2M9 1422 aa12.87□□□□□ -0.35
RANBP3-218ENST00000590623 UGGT2Q9NYU1 1516 aa12.85□□□□□ -0.35
RANBP3-218ENST00000590623 EFCAB5A4FU69 1503 aa12.84□□□□□ -0.35
RANBP3-218ENST00000590623 VPS8Q8N3P4 1428 aa12.84□□□□□ -0.35
RANBP3-218ENST00000590623 DISP1Q96F81 1524 aa12.82□□□□□ -0.36
RANBP3-218ENST00000590623 KIAA0556O60303 1618 aa12.81□□□□□ -0.36
RANBP3-218ENST00000590623 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
RANBP3-218ENST00000590623 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
RANBP3-218ENST00000590623 PCF11O94913 1555 aaKnown RBP12.8□□□□□ -0.36
RANBP3-218ENST00000590623 ERCC6L2Q5T890 1561 aa12.78□□□□□ -0.36
RANBP3-218ENST00000590623 SHROOM2Q13796 1616 aa12.78□□□□□ -0.36
RANBP3-218ENST00000590623 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
RANBP3-218ENST00000590623 LRRIQ1Q96JM4 1722 aa12.76□□□□□ -0.37
RANBP3-218ENST00000590623 TTBK1Q5TCY1 1321 aaPredicted RBP12.75□□□□□ -0.37
RANBP3-218ENST00000590623 PRG4Q92954 1404 aaPredicted RBP12.73□□□□□ -0.37
RANBP3-218ENST00000590623 CASKIN1Q8WXD9 1431 aa12.7□□□□□ -0.38
RANBP3-218ENST00000590623 FYCO1Q9BQS8 1478 aa12.69□□□□□ -0.38
RANBP3-218ENST00000590623 CFAP43Q8NDM7 1665 aa12.69□□□□□ -0.38
RANBP3-218ENST00000590623 FMN1Q68DA7 1419 aa12.69□□□□□ -0.38
RANBP3-218ENST00000590623 CARMIL2Q6F5E8 1435 aa12.69□□□□□ -0.38
RANBP3-218ENST00000590623 ATP1B4Q9UN42 357 aaPredicted RBP12.68□□□□□ -0.38
RANBP3-218ENST00000590623 RAPGEF6Q8TEU7 1601 aa12.67□□□□□ -0.38
RANBP3-218ENST00000590623 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
RANBP3-218ENST00000590623 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
RANBP3-218ENST00000590623 KANK4Q5T7N3 995 aaPredicted RBP12.66□□□□□ -0.38
RANBP3-218ENST00000590623 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
RANBP3-218ENST00000590623 ABCA8O94911 1581 aa12.64□□□□□ -0.39
RANBP3-218ENST00000590623 CDK13Q14004 1512 aaKnown RBP12.64□□□□□ -0.39
RANBP3-218ENST00000590623 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
RANBP3-218ENST00000590623 ARID3CA6NKF2 412 aa12.64□□□□□ -0.39
RANBP3-218ENST00000590623 NUP153P49790 1475 aaKnown RBP12.62□□□□□ -0.39
RANBP3-218ENST00000590623 PTPRGP23470 1445 aa12.62□□□□□ -0.39
RANBP3-218ENST00000590623 APLP2Q06481 763 aa12.61□□□□□ -0.39
RANBP3-218ENST00000590623 MAP3K1Q13233 1512 aa12.61□□□□□ -0.39
RANBP3-218ENST00000590623 MAGI3Q5TCQ9 1506 aa12.61□□□□□ -0.39
RANBP3-218ENST00000590623 EPRSP07814 1512 aaKnown RBP12.6□□□□□ -0.39
RANBP3-218ENST00000590623 LRRC9Q6ZRR7 1453 aa12.59□□□□□ -0.39
RANBP3-218ENST00000590623 CCDC18Q5T9S5 1454 aa12.55□□□□□ -0.4
RANBP3-218ENST00000590623 UACAQ9BZF9 1416 aa12.54□□□□□ -0.4
RANBP3-218ENST00000590623 ATP10BO94823 1461 aa12.54□□□□□ -0.4
RANBP3-218ENST00000590623 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
RANBP3-218ENST00000590623 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
RANBP3-218ENST00000590623 ABCC2Q92887 1545 aa12.53□□□□□ -0.4
RANBP3-218ENST00000590623 RIMBP3CA6NJZ7 1639 aa12.53□□□□□ -0.4
RANBP3-218ENST00000590623 RIMBP3BA6NNM3 1639 aa12.53□□□□□ -0.4
RANBP3-218ENST00000590623 ADCY10Q96PN6 1610 aa12.53□□□□□ -0.4
RANBP3-218ENST00000590623 RIMBP3Q9UFD9 1639 aa12.53□□□□□ -0.4
RANBP3-218ENST00000590623 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
RANBP3-218ENST00000590623 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
RANBP3-218ENST00000590623 MTUS2Q5JR59 1369 aa12.51□□□□□ -0.41
RANBP3-218ENST00000590623 ZCCHC11Q5TAX3 1644 aaKnown RBP12.51□□□□□ -0.41
RANBP3-218ENST00000590623 SUPT6HQ7KZ85 1726 aaKnown RBP12.49□□□□□ -0.41
RANBP3-218ENST00000590623 KIF14Q15058 1648 aa12.49□□□□□ -0.41
RANBP3-218ENST00000590623 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
RANBP3-218ENST00000590623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
RANBP3-218ENST00000590623 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
RANBP3-218ENST00000590623 UHRF1BP1LA0JNW5 1464 aa12.48□□□□□ -0.41
RANBP3-218ENST00000590623 NCOA2Q15596 1464 aa12.47□□□□□ -0.41
RANBP3-218ENST00000590623 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
RANBP3-218ENST00000590623 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
RANBP3-218ENST00000590623 KDM5BQ9UGL1 1544 aa12.45□□□□□ -0.42
RANBP3-218ENST00000590623 RRBP1Q9P2E9 1410 aaKnown RBP12.43□□□□□ -0.42
RANBP3-218ENST00000590623 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.43
RANBP3-218ENST00000590623 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.43
RANBP3-218ENST00000590623 MYOM3Q5VTT5 1437 aa12.39□□□□□ -0.43
RANBP3-218ENST00000590623 PLEKHD1A6NEE1 506 aa12.39□□□□□ -0.43
RANBP3-218ENST00000590623 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
RANBP3-218ENST00000590623 CDK11AQ9UQ88 783 aaPredicted RBP12.39□□□□□ -0.43
RANBP3-218ENST00000590623 CCNB3Q8WWL7 1395 aa12.39□□□□□ -0.43
RANBP3-218ENST00000590623 FGD6Q6ZV73 1430 aa12.38□□□□□ -0.43
RANBP3-218ENST00000590623 TTC37Q6PGP7 1564 aa12.38□□□□□ -0.43
RANBP3-218ENST00000590623 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
RANBP3-218ENST00000590623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.36□□□□□ -0.437e-8■□□□□ 9
RANBP3-218ENST00000590623 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
RANBP3-218ENST00000590623 FAM50AQ14320 339 aaKnown RBP12.35□□□□□ -0.43
RANBP3-218ENST00000590623 KCNH8Q96L42 1107 aa12.35□□□□□ -0.43
RANBP3-218ENST00000590623 GPATCH8Q9UKJ3 1502 aaKnown RBP12.35□□□□□ -0.43
RANBP3-218ENST00000590623 ITSN2Q9NZM3 1697 aa12.35□□□□□ -0.43
RANBP3-218ENST00000590623 ASXL2Q76L83 1435 aa12.34□□□□□ -0.43
RANBP3-218ENST00000590623 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
RANBP3-218ENST00000590623 ITGAEP38570 1179 aa12.33□□□□□ -0.44
RANBP3-218ENST00000590623 ZNF644Q9H582 1327 aaPredicted RBP12.33□□□□□ -0.44
RANBP3-218ENST00000590623 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
RANBP3-218ENST00000590623 PREX2Q70Z35 1606 aa12.33□□□□□ -0.44
RANBP3-218ENST00000590623 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
RANBP3-218ENST00000590623 PTPRKQ15262 1439 aa12.3□□□□□ -0.44
RANBP3-218ENST00000590623 MIA2Q96PC5 1412 aa12.29□□□□□ -0.44
RANBP3-218ENST00000590623 CAMSAP2Q08AD1 1489 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms