RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 KIAA0586Q9BVV6 1533 aa19.84■□□□□ 0.77
APOC1-206ENST00000590334 SHROOM2Q13796 1616 aa19.83■□□□□ 0.76
APOC1-206ENST00000590334 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
APOC1-206ENST00000590334 UGGT2Q9NYU1 1516 aa19.71■□□□□ 0.75
APOC1-206ENST00000590334 JPH4Q96JJ6 628 aa19.68■□□□□ 0.74
APOC1-206ENST00000590334 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
APOC1-206ENST00000590334 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
APOC1-206ENST00000590334 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
APOC1-206ENST00000590334 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
APOC1-206ENST00000590334 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
APOC1-206ENST00000590334 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
APOC1-206ENST00000590334 DNAJC5Q9H3Z4 198 aa19.64■□□□□ 0.73
APOC1-206ENST00000590334 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
APOC1-206ENST00000590334 SAMD9Q5K651 1589 aa19.64■□□□□ 0.73
APOC1-206ENST00000590334 ERCC6L2Q5T890 1561 aa19.64■□□□□ 0.73
APOC1-206ENST00000590334 DISP1Q96F81 1524 aa19.63■□□□□ 0.73
APOC1-206ENST00000590334 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
APOC1-206ENST00000590334 KIAA0556O60303 1618 aa19.62■□□□□ 0.73
APOC1-206ENST00000590334 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
APOC1-206ENST00000590334 EFCAB5A4FU69 1503 aa19.6■□□□□ 0.73
APOC1-206ENST00000590334 CARMIL2Q6F5E8 1435 aa19.59■□□□□ 0.73
APOC1-206ENST00000590334 ARHGAP35Q9NRY4 1499 aa19.51■□□□□ 0.71
APOC1-206ENST00000590334 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
APOC1-206ENST00000590334 CEP162Q5TB80 1403 aa19.48■□□□□ 0.71
APOC1-206ENST00000590334 CLIP1P30622 1438 aa19.47■□□□□ 0.71
APOC1-206ENST00000590334 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
APOC1-206ENST00000590334 PTPRGP23470 1445 aa19.43■□□□□ 0.7
APOC1-206ENST00000590334 FHOD3Q2V2M9 1422 aa19.42■□□□□ 0.7
APOC1-206ENST00000590334 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
APOC1-206ENST00000590334 ABCA8O94911 1581 aa19.38■□□□□ 0.69
APOC1-206ENST00000590334 ADCY10Q96PN6 1610 aa19.37■□□□□ 0.69
APOC1-206ENST00000590334 FMN1Q68DA7 1419 aa19.36■□□□□ 0.69
APOC1-206ENST00000590334 RAPGEF6Q8TEU7 1601 aa19.36■□□□□ 0.69
APOC1-206ENST00000590334 UHRF1BP1LA0JNW5 1464 aa19.35■□□□□ 0.69
APOC1-206ENST00000590334 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
APOC1-206ENST00000590334 ABCC2Q92887 1545 aa19.34■□□□□ 0.69
APOC1-206ENST00000590334 PLB1Q6P1J6 1458 aa19.34■□□□□ 0.69
APOC1-206ENST00000590334 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
APOC1-206ENST00000590334 TTBK1Q5TCY1 1321 aaPredicted RBP19.29■□□□□ 0.68
APOC1-206ENST00000590334 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
APOC1-206ENST00000590334 HECW1Q76N89 1606 aa19.28■□□□□ 0.68
APOC1-206ENST00000590334 LRRIQ1Q96JM4 1722 aa19.28■□□□□ 0.68
APOC1-206ENST00000590334 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
APOC1-206ENST00000590334 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
APOC1-206ENST00000590334 ZCCHC11Q5TAX3 1644 aaKnown RBP19.25■□□□□ 0.67
APOC1-206ENST00000590334 NUP153P49790 1475 aaKnown RBP19.25■□□□□ 0.67
APOC1-206ENST00000590334 FYCO1Q9BQS8 1478 aa19.25■□□□□ 0.67
APOC1-206ENST00000590334 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
APOC1-206ENST00000590334 ATP10BO94823 1461 aa19.18■□□□□ 0.66
APOC1-206ENST00000590334 MAPKBP1O60336 1514 aa19.17■□□□□ 0.66
APOC1-206ENST00000590334 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
APOC1-206ENST00000590334 CCDC18Q5T9S5 1454 aa19.16■□□□□ 0.66
APOC1-206ENST00000590334 CDK13Q14004 1512 aaKnown RBP19.14■□□□□ 0.65
APOC1-206ENST00000590334 CFAP43Q8NDM7 1665 aa19.14■□□□□ 0.65
APOC1-206ENST00000590334 NPM1P06748 294 aaKnown RBP eCLIP19.13■□□□□ 0.65
APOC1-206ENST00000590334 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
APOC1-206ENST00000590334 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
APOC1-206ENST00000590334 ATP1B4Q9UN42 357 aaPredicted RBP19.08■□□□□ 0.64
APOC1-206ENST00000590334 ASXL2Q76L83 1435 aa19.08■□□□□ 0.64
APOC1-206ENST00000590334 WDR7Q9Y4E6 1490 aa19.05■□□□□ 0.64
APOC1-206ENST00000590334 ARID3CA6NKF2 412 aa19.05■□□□□ 0.64
APOC1-206ENST00000590334 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
APOC1-206ENST00000590334 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
APOC1-206ENST00000590334 DIP2BQ9P265 1576 aa19.02■□□□□ 0.64
APOC1-206ENST00000590334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
APOC1-206ENST00000590334 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
APOC1-206ENST00000590334 CDK11AQ9UQ88 783 aaPredicted RBP19■□□□□ 0.63
APOC1-206ENST00000590334 GLI2P10070 1586 aa19■□□□□ 0.63
APOC1-206ENST00000590334 ABCC10Q5T3U5 1492 aa18.99■□□□□ 0.63
APOC1-206ENST00000590334 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
APOC1-206ENST00000590334 TROQ12816 1431 aaPredicted RBP18.99■□□□□ 0.63
APOC1-206ENST00000590334 EHBP1L1Q8N3D4 1523 aa18.98■□□□□ 0.63
APOC1-206ENST00000590334 KIF14Q15058 1648 aa18.96■□□□□ 0.63
APOC1-206ENST00000590334 ABCA9Q8IUA7 1624 aa18.96■□□□□ 0.63
APOC1-206ENST00000590334 LRRC9Q6ZRR7 1453 aa18.96■□□□□ 0.63
APOC1-206ENST00000590334 MAP3K4Q9Y6R4 1608 aa18.95■□□□□ 0.62
APOC1-206ENST00000590334 SUPT6HQ7KZ85 1726 aaKnown RBP18.93■□□□□ 0.62
APOC1-206ENST00000590334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.93■□□□□ 0.62
APOC1-206ENST00000590334 APLP2Q06481 763 aa18.92■□□□□ 0.62
APOC1-206ENST00000590334 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
APOC1-206ENST00000590334 TTC37Q6PGP7 1564 aa18.91■□□□□ 0.62
APOC1-206ENST00000590334 MYO5CQ9NQX4 1742 aa18.89■□□□□ 0.61
APOC1-206ENST00000590334 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
APOC1-206ENST00000590334 KANK4Q5T7N3 995 aaPredicted RBP18.88■□□□□ 0.61
APOC1-206ENST00000590334 CDC42BPAQ5VT25 1732 aa18.88■□□□□ 0.61
APOC1-206ENST00000590334 PPRC1Q5VV67 1664 aaKnown RBP18.87■□□□□ 0.61
APOC1-206ENST00000590334 FAM69CQ0P6D2 419 aa18.86■□□□□ 0.61
APOC1-206ENST00000590334 TSPOAP1O95153 1857 aa18.85■□□□□ 0.61
APOC1-206ENST00000590334 CDC42BPBQ9Y5S2 1711 aa18.85■□□□□ 0.61
APOC1-206ENST00000590334 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
APOC1-206ENST00000590334 PREX2Q70Z35 1606 aa18.84■□□□□ 0.61
APOC1-206ENST00000590334 ARAP3Q8WWN8 1544 aa18.83■□□□□ 0.6
APOC1-206ENST00000590334 NCOA2Q15596 1464 aa18.83■□□□□ 0.6
APOC1-206ENST00000590334 CD109Q6YHK3 1445 aa18.82■□□□□ 0.6
APOC1-206ENST00000590334 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
APOC1-206ENST00000590334 PLCH2O75038 1416 aa18.79■□□□□ 0.6
APOC1-206ENST00000590334 CFAP74Q9C0B2 1584 aa18.79■□□□□ 0.6
APOC1-206ENST00000590334 GPATCH8Q9UKJ3 1502 aaKnown RBP18.78■□□□□ 0.6
APOC1-206ENST00000590334 TEX14Q8IWB6 1497 aa18.76■□□□□ 0.59
APOC1-206ENST00000590334 CCNB3Q8WWL7 1395 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms