RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 NUP160Q12769 1436 aa24.52■■□□□ 1.52
DDX39A-211ENST00000590239 CEP170Q5SW79 1584 aa24.47■■□□□ 1.51
DDX39A-211ENST00000590239 CTTNBP2Q8WZ74 1663 aa24.46■■□□□ 1.51
DDX39A-211ENST00000590239 KIAA0586Q9BVV6 1533 aa24.45■■□□□ 1.51
DDX39A-211ENST00000590239 IQGAP2Q13576 1575 aa24.39■■□□□ 1.5
DDX39A-211ENST00000590239 CEP162Q5TB80 1403 aa24.35■■□□□ 1.49
DDX39A-211ENST00000590239 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
DDX39A-211ENST00000590239 CLASP1Q7Z460 1538 aa24.33■■□□□ 1.49
DDX39A-211ENST00000590239 CLIP1P30622 1438 aa24.31■■□□□ 1.48
DDX39A-211ENST00000590239 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
DDX39A-211ENST00000590239 JPH4Q96JJ6 628 aa24.28■■□□□ 1.48
DDX39A-211ENST00000590239 EFCAB5A4FU69 1503 aa24.26■■□□□ 1.47
DDX39A-211ENST00000590239 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
DDX39A-211ENST00000590239 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
DDX39A-211ENST00000590239 SAMD9Q5K651 1589 aa24.22■■□□□ 1.47
DDX39A-211ENST00000590239 ARHGAP35Q9NRY4 1499 aa24.22■■□□□ 1.47
DDX39A-211ENST00000590239 DISP1Q96F81 1524 aa24.18■■□□□ 1.46
DDX39A-211ENST00000590239 CARMIL2Q6F5E8 1435 aa24.18■■□□□ 1.46
DDX39A-211ENST00000590239 PRG4Q92954 1404 aaPredicted RBP24.16■■□□□ 1.46
DDX39A-211ENST00000590239 KIAA0556O60303 1618 aa24.14■■□□□ 1.46
DDX39A-211ENST00000590239 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
DDX39A-211ENST00000590239 P3H3Q8IVL6 736 aa24.11■■□□□ 1.45
DDX39A-211ENST00000590239 FHOD3Q2V2M9 1422 aa24.09■■□□□ 1.45
DDX39A-211ENST00000590239 FMN1Q68DA7 1419 aa24.03■■□□□ 1.44
DDX39A-211ENST00000590239 VPS8Q8N3P4 1428 aa24.03■■□□□ 1.44
DDX39A-211ENST00000590239 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
DDX39A-211ENST00000590239 PTPRGP23470 1445 aa23.98■■□□□ 1.43
DDX39A-211ENST00000590239 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
DDX39A-211ENST00000590239 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
DDX39A-211ENST00000590239 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
DDX39A-211ENST00000590239 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
DDX39A-211ENST00000590239 CASKIN1Q8WXD9 1431 aa23.92■■□□□ 1.42
DDX39A-211ENST00000590239 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.42
DDX39A-211ENST00000590239 FYCO1Q9BQS8 1478 aa23.89■■□□□ 1.42
DDX39A-211ENST00000590239 PCF11O94913 1555 aaKnown RBP23.87■■□□□ 1.41
DDX39A-211ENST00000590239 ABCA8O94911 1581 aa23.86■■□□□ 1.41
DDX39A-211ENST00000590239 RAPGEF6Q8TEU7 1601 aa23.84■■□□□ 1.41
DDX39A-211ENST00000590239 PLB1Q6P1J6 1458 aa23.84■■□□□ 1.41
DDX39A-211ENST00000590239 UACAQ9BZF9 1416 aa23.83■■□□□ 1.4
DDX39A-211ENST00000590239 HECW1Q76N89 1606 aa23.81■■□□□ 1.4
DDX39A-211ENST00000590239 UHRF1BP1LA0JNW5 1464 aa23.79■■□□□ 1.4
DDX39A-211ENST00000590239 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
DDX39A-211ENST00000590239 NUP153P49790 1475 aaKnown RBP23.77■■□□□ 1.4
DDX39A-211ENST00000590239 ABCC2Q92887 1545 aa23.77■■□□□ 1.4
DDX39A-211ENST00000590239 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
DDX39A-211ENST00000590239 APLP2Q06481 763 aa23.76■■□□□ 1.39
DDX39A-211ENST00000590239 CCDC18Q5T9S5 1454 aa23.75■■□□□ 1.39
DDX39A-211ENST00000590239 EPRSP07814 1512 aaKnown RBP23.74■■□□□ 1.39
DDX39A-211ENST00000590239 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
DDX39A-211ENST00000590239 TIAM1Q13009 1591 aa23.69■■□□□ 1.38
DDX39A-211ENST00000590239 LRRIQ1Q96JM4 1722 aa23.69■■□□□ 1.38
DDX39A-211ENST00000590239 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
DDX39A-211ENST00000590239 CFAP43Q8NDM7 1665 aa23.67■■□□□ 1.38
DDX39A-211ENST00000590239 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
DDX39A-211ENST00000590239 ATP10BO94823 1461 aa23.67■■□□□ 1.38
DDX39A-211ENST00000590239 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
DDX39A-211ENST00000590239 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
DDX39A-211ENST00000590239 ARID3CA6NKF2 412 aa23.63■■□□□ 1.37
DDX39A-211ENST00000590239 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
DDX39A-211ENST00000590239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
DDX39A-211ENST00000590239 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
DDX39A-211ENST00000590239 LRRC9Q6ZRR7 1453 aa23.59■■□□□ 1.37
DDX39A-211ENST00000590239 TRHP20396 242 aaPredicted RBP23.58■■□□□ 1.37
DDX39A-211ENST00000590239 KANK4Q5T7N3 995 aaPredicted RBP23.58■■□□□ 1.37
DDX39A-211ENST00000590239 ZCCHC11Q5TAX3 1644 aaKnown RBP23.58■■□□□ 1.36
DDX39A-211ENST00000590239 NPM1P06748 294 aaKnown RBP eCLIP23.57■■□□□ 1.36
DDX39A-211ENST00000590239 MTUS2Q5JR59 1369 aa23.55■■□□□ 1.36
DDX39A-211ENST00000590239 PLEKHD1A6NEE1 506 aa23.54■■□□□ 1.36
DDX39A-211ENST00000590239 EHBP1L1Q8N3D4 1523 aa23.54■■□□□ 1.36
DDX39A-211ENST00000590239 MAGI3Q5TCQ9 1506 aa23.53■■□□□ 1.36
DDX39A-211ENST00000590239 TROQ12816 1431 aaPredicted RBP23.51■■□□□ 1.35
DDX39A-211ENST00000590239 PPARGC1BQ86YN6 1023 aaKnown RBP23.5■■□□□ 1.35
DDX39A-211ENST00000590239 ASXL2Q76L83 1435 aa23.44■■□□□ 1.34
DDX39A-211ENST00000590239 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
DDX39A-211ENST00000590239 MAPKBP1O60336 1514 aa23.43■■□□□ 1.34
DDX39A-211ENST00000590239 SUPT6HQ7KZ85 1726 aaKnown RBP23.42■■□□□ 1.34
DDX39A-211ENST00000590239 NCOA2Q15596 1464 aa23.4■■□□□ 1.34
DDX39A-211ENST00000590239 KIF14Q15058 1648 aa23.39■■□□□ 1.33
DDX39A-211ENST00000590239 ABCC10Q5T3U5 1492 aa23.33■■□□□ 1.33
DDX39A-211ENST00000590239 KCNH8Q96L42 1107 aa23.33■■□□□ 1.33
DDX39A-211ENST00000590239 PHLDB1Q86UU1 1377 aa23.32■■□□□ 1.32
DDX39A-211ENST00000590239 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
DDX39A-211ENST00000590239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.29■■□□□ 1.324e-7■■□□□ 11.9
DDX39A-211ENST00000590239 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
DDX39A-211ENST00000590239 GPATCH8Q9UKJ3 1502 aaKnown RBP23.26■■□□□ 1.31
DDX39A-211ENST00000590239 ABCA9Q8IUA7 1624 aa23.26■■□□□ 1.31
DDX39A-211ENST00000590239 TTC37Q6PGP7 1564 aa23.25■■□□□ 1.31
DDX39A-211ENST00000590239 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
DDX39A-211ENST00000590239 ITSN2Q9NZM3 1697 aa23.23■■□□□ 1.31
DDX39A-211ENST00000590239 RRBP1Q9P2E9 1410 aaKnown RBP23.23■■□□□ 1.31
DDX39A-211ENST00000590239 GLI2P10070 1586 aa23.23■■□□□ 1.31
DDX39A-211ENST00000590239 FGD6Q6ZV73 1430 aa23.22■■□□□ 1.31
DDX39A-211ENST00000590239 CDC42BPAQ5VT25 1732 aa23.2■■□□□ 1.3
DDX39A-211ENST00000590239 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
DDX39A-211ENST00000590239 DIP2BQ9P265 1576 aa23.19■■□□□ 1.3
DDX39A-211ENST00000590239 PLCH2O75038 1416 aa23.19■■□□□ 1.3
DDX39A-211ENST00000590239 MYO5CQ9NQX4 1742 aa23.19■■□□□ 1.3
DDX39A-211ENST00000590239 PREX2Q70Z35 1606 aa23.19■■□□□ 1.3
DDX39A-211ENST00000590239 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
DDX39A-211ENST00000590239 CFDP1Q9UEE9 299 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms