RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 RIMBP3Q9UFD9 1639 aa31.33■■■□□ 2.61
MBD1-223ENST00000590215 KIAA0586Q9BVV6 1533 aa31.3■■■□□ 2.6
MBD1-223ENST00000590215 SHROOM2Q13796 1616 aa31.27■■■□□ 2.6
MBD1-223ENST00000590215 JPH4Q96JJ6 628 aa31.22■■■□□ 2.59
MBD1-223ENST00000590215 FAM9AQ8IZU1 332 aaPredicted RBP31.19■■■□□ 2.58
MBD1-223ENST00000590215 ARAP1Q96P48 1450 aa31.14■■■□□ 2.58
MBD1-223ENST00000590215 PRG4Q92954 1404 aaPredicted RBP31.12■■■□□ 2.57
MBD1-223ENST00000590215 ERCC6L2Q5T890 1561 aa31.11■■■□□ 2.57
MBD1-223ENST00000590215 IQGAP2Q13576 1575 aa31.1■■■□□ 2.57
MBD1-223ENST00000590215 CYB5RLQ6IPT4 315 aa31.06■■■□□ 2.56
MBD1-223ENST00000590215 KIF21BO75037 1637 aa31.06■■■□□ 2.56
MBD1-223ENST00000590215 CTTNBP2Q8WZ74 1663 aa31■■■□□ 2.55
MBD1-223ENST00000590215 UGGT2Q9NYU1 1516 aa30.98■■■□□ 2.55
MBD1-223ENST00000590215 CARMIL2Q6F5E8 1435 aa30.92■■■□□ 2.54
MBD1-223ENST00000590215 DISP1Q96F81 1524 aa30.91■■■□□ 2.54
MBD1-223ENST00000590215 GOLGA3Q08378 1498 aa30.88■■■□□ 2.53
MBD1-223ENST00000590215 TNIKQ9UKE5 1360 aa30.83■■■□□ 2.53
MBD1-223ENST00000590215 KIAA0556O60303 1618 aa30.8■■■□□ 2.52
MBD1-223ENST00000590215 PTPRGP23470 1445 aa30.79■■■□□ 2.52
MBD1-223ENST00000590215 UBTFP17480 764 aaKnown RBP30.75■■■□□ 2.51
MBD1-223ENST00000590215 EHMT2Q96KQ7 1210 aa30.71■■■□□ 2.51
MBD1-223ENST00000590215 SAMD9Q5K651 1589 aa30.68■■■□□ 2.5
MBD1-223ENST00000590215 ADCY10Q96PN6 1610 aa30.61■■■□□ 2.49
MBD1-223ENST00000590215 TTBK1Q5TCY1 1321 aaPredicted RBP30.6■■■□□ 2.49
MBD1-223ENST00000590215 UHRF1BP1LA0JNW5 1464 aa30.59■■■□□ 2.49
MBD1-223ENST00000590215 UACAQ9BZF9 1416 aa30.59■■■□□ 2.49
MBD1-223ENST00000590215 EFCAB5A4FU69 1503 aa30.58■■■□□ 2.49
MBD1-223ENST00000590215 P3H3Q8IVL6 736 aa30.56■■■□□ 2.48
MBD1-223ENST00000590215 RANGAP1P46060 587 aaPredicted RBP30.55■■■□□ 2.48
MBD1-223ENST00000590215 ABCC2Q92887 1545 aa30.52■■■□□ 2.48
MBD1-223ENST00000590215 FHOD3Q2V2M9 1422 aa30.49■■■□□ 2.47
MBD1-223ENST00000590215 PLB1Q6P1J6 1458 aa30.49■■■□□ 2.47
MBD1-223ENST00000590215 ABCA8O94911 1581 aa30.49■■■□□ 2.47
MBD1-223ENST00000590215 NPM1P06748 294 aaKnown RBP eCLIP30.48■■■□□ 2.47
MBD1-223ENST00000590215 ARHGAP35Q9NRY4 1499 aa30.47■■■□□ 2.47
MBD1-223ENST00000590215 KDM5BQ9UGL1 1544 aa30.43■■■□□ 2.46
MBD1-223ENST00000590215 MAPKBP1O60336 1514 aa30.42■■■□□ 2.46
MBD1-223ENST00000590215 LOC105371045A0A1W2PR82 267 aa30.37■■■□□ 2.45
MBD1-223ENST00000590215 CLIP1P30622 1438 aa30.33■■■□□ 2.45
MBD1-223ENST00000590215 RAPGEF6Q8TEU7 1601 aa30.32■■■□□ 2.44
MBD1-223ENST00000590215 FMN1Q68DA7 1419 aa30.31■■■□□ 2.44
MBD1-223ENST00000590215 TRHP20396 242 aaPredicted RBP30.31■■■□□ 2.44
MBD1-223ENST00000590215 ZCCHC11Q5TAX3 1644 aaKnown RBP30.29■■■□□ 2.44
MBD1-223ENST00000590215 ASXL2Q76L83 1435 aa30.27■■■□□ 2.44
MBD1-223ENST00000590215 NUP153P49790 1475 aaKnown RBP30.25■■■□□ 2.43
MBD1-223ENST00000590215 ABCC10Q5T3U5 1492 aa30.25■■■□□ 2.43
MBD1-223ENST00000590215 ATP10BO94823 1461 aa30.25■■■□□ 2.43
MBD1-223ENST00000590215 CEP162Q5TB80 1403 aa30.24■■■□□ 2.43
MBD1-223ENST00000590215 DIP2BQ9P265 1576 aa30.17■■■□□ 2.42
MBD1-223ENST00000590215 KIF13AQ9H1H9 1805 aa30.15■■■□□ 2.42
MBD1-223ENST00000590215 WDR7Q9Y4E6 1490 aa30.15■■■□□ 2.42
MBD1-223ENST00000590215 ARID3CA6NKF2 412 aa30.14■■■□□ 2.42
MBD1-223ENST00000590215 FAM69CQ0P6D2 419 aa30.14■■■□□ 2.42
MBD1-223ENST00000590215 CASKIN1Q8WXD9 1431 aa30.11■■■□□ 2.41
MBD1-223ENST00000590215 EPRSP07814 1512 aaKnown RBP30.1■■■□□ 2.41
MBD1-223ENST00000590215 GLI2P10070 1586 aa30.09■■■□□ 2.41
MBD1-223ENST00000590215 HECW1Q76N89 1606 aa30.09■■■□□ 2.41
MBD1-223ENST00000590215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.03■■■□□ 2.4
MBD1-223ENST00000590215 HNRNPUL2Q1KMD3 747 aaKnown RBP30.03■■■□□ 2.4
MBD1-223ENST00000590215 PCF11O94913 1555 aaKnown RBP30.03■■■□□ 2.4
MBD1-223ENST00000590215 FYCO1Q9BQS8 1478 aa30.02■■■□□ 2.4
MBD1-223ENST00000590215 CDK13Q14004 1512 aaKnown RBP30.01■■■□□ 2.4
MBD1-223ENST00000590215 ATP1B4Q9UN42 357 aaPredicted RBP30.01■■■□□ 2.39
MBD1-223ENST00000590215 PLEKHD1A6NEE1 506 aa29.98■■■□□ 2.39
MBD1-223ENST00000590215 KCNH8Q96L42 1107 aa29.97■■■□□ 2.39
MBD1-223ENST00000590215 CCDC18Q5T9S5 1454 aa29.94■■■□□ 2.38
MBD1-223ENST00000590215 LRRIQ1Q96JM4 1722 aa29.93■■■□□ 2.38
MBD1-223ENST00000590215 MAP3K4Q9Y6R4 1608 aa29.92■■■□□ 2.38
MBD1-223ENST00000590215 CDK11AQ9UQ88 783 aaPredicted RBP29.91■■■□□ 2.38
MBD1-223ENST00000590215 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
MBD1-223ENST00000590215 CFAP43Q8NDM7 1665 aa29.85■■■□□ 2.37
MBD1-223ENST00000590215 CD109Q6YHK3 1445 aa29.85■■■□□ 2.37
MBD1-223ENST00000590215 ABCA9Q8IUA7 1624 aa29.85■■■□□ 2.37
MBD1-223ENST00000590215 PPRC1Q5VV67 1664 aaKnown RBP29.84■■■□□ 2.37
MBD1-223ENST00000590215 TROQ12816 1431 aaPredicted RBP29.83■■■□□ 2.37
MBD1-223ENST00000590215 TSPOAP1O95153 1857 aa29.82■■■□□ 2.36
MBD1-223ENST00000590215 MAGI3Q5TCQ9 1506 aa29.81■■■□□ 2.36
MBD1-223ENST00000590215 TEX14Q8IWB6 1497 aa29.78■■■□□ 2.36
MBD1-223ENST00000590215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.76■■■□□ 2.36
MBD1-223ENST00000590215 TTC37Q6PGP7 1564 aa29.69■■■□□ 2.34
MBD1-223ENST00000590215 KIF14Q15058 1648 aa29.69■■■□□ 2.34
MBD1-223ENST00000590215 MAP3K1Q13233 1512 aa29.65■■■□□ 2.34
MBD1-223ENST00000590215 TIAM1Q13009 1591 aa29.64■■■□□ 2.33
MBD1-223ENST00000590215 MTUS2Q5JR59 1369 aa29.63■■■□□ 2.33
MBD1-223ENST00000590215 PHLDB1Q86UU1 1377 aa29.63■■■□□ 2.33
MBD1-223ENST00000590215 PLCH2O75038 1416 aa29.62■■■□□ 2.33
MBD1-223ENST00000590215 NEO1Q92859 1461 aa29.61■■■□□ 2.33
MBD1-223ENST00000590215 COL17A1Q9UMD9 1497 aaPredicted RBP29.6■■■□□ 2.33
MBD1-223ENST00000590215 ARAP3Q8WWN8 1544 aa29.6■■■□□ 2.33
MBD1-223ENST00000590215 KDM6BO15054 1643 aa29.6■■■□□ 2.33
MBD1-223ENST00000590215 EHBP1L1Q8N3D4 1523 aa29.59■■■□□ 2.33
MBD1-223ENST00000590215 FANCAO15360 1455 aa29.55■■■□□ 2.32
MBD1-223ENST00000590215 MYO5CQ9NQX4 1742 aa29.53■■■□□ 2.32
MBD1-223ENST00000590215 LRRC9Q6ZRR7 1453 aa29.53■■■□□ 2.32
MBD1-223ENST00000590215 AKNAQ7Z591 1439 aa29.5■■■□□ 2.31
MBD1-223ENST00000590215 CFAP74Q9C0B2 1584 aa29.5■■■□□ 2.31
MBD1-223ENST00000590215 EFCAB2Q5VUJ9 269 aa29.49■■■□□ 2.31
MBD1-223ENST00000590215 KANK4Q5T7N3 995 aaPredicted RBP29.48■■■□□ 2.31
MBD1-223ENST00000590215 GPATCH8Q9UKJ3 1502 aaKnown RBP29.47■■■□□ 2.31
MBD1-223ENST00000590215 APLP2Q06481 763 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms