RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 TOP2BQ02880 1626 aa10.71□□□□□ -0.69
LDLRAD4-213ENST00000590115 HECW2Q9P2P5 1572 aa10.7□□□□□ -0.7
LDLRAD4-213ENST00000590115 WRNQ14191 1432 aaPredicted RBP eCLIP10.7□□□□□ -0.7
LDLRAD4-213ENST00000590115 ABCA10Q8WWZ4 1543 aa10.69□□□□□ -0.7
LDLRAD4-213ENST00000590115 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
LDLRAD4-213ENST00000590115 PPRC1Q5VV67 1664 aaKnown RBP10.68□□□□□ -0.7
LDLRAD4-213ENST00000590115 ADGRL1O94910 1474 aa10.63□□□□□ -0.71
LDLRAD4-213ENST00000590115 RUSC2Q8N2Y8 1516 aa10.63□□□□□ -0.71
LDLRAD4-213ENST00000590115 FAM69CQ0P6D2 419 aa10.62□□□□□ -0.71
LDLRAD4-213ENST00000590115 PRG4Q92954 1404 aaPredicted RBP10.59□□□□□ -0.71
LDLRAD4-213ENST00000590115 CHIC1Q5VXU3 224 aa10.59□□□□□ -0.71
LDLRAD4-213ENST00000590115 FHAD1B1AJZ9 1412 aa10.57□□□□□ -0.72
LDLRAD4-213ENST00000590115 ERICH3Q5RHP9 1530 aa10.55□□□□□ -0.72
LDLRAD4-213ENST00000590115 COL17A1Q9UMD9 1497 aaPredicted RBP10.51□□□□□ -0.73
LDLRAD4-213ENST00000590115 GLI2P10070 1586 aa10.51□□□□□ -0.73
LDLRAD4-213ENST00000590115 CUL7Q14999 1698 aa10.5□□□□□ -0.73
LDLRAD4-213ENST00000590115 MAP3K4Q9Y6R4 1608 aa10.5□□□□□ -0.73
LDLRAD4-213ENST00000590115 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
LDLRAD4-213ENST00000590115 IGF1RP08069 1367 aa10.48□□□□□ -0.73
LDLRAD4-213ENST00000590115 FBXO41Q8TF61 875 aa10.47□□□□□ -0.73
LDLRAD4-213ENST00000590115 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
LDLRAD4-213ENST00000590115 ABCC2Q92887 1545 aa10.43□□□□□ -0.74
LDLRAD4-213ENST00000590115 KIF21BO75037 1637 aa10.42□□□□□ -0.74
LDLRAD4-213ENST00000590115 ASXL2Q76L83 1435 aa10.41□□□□□ -0.74
LDLRAD4-213ENST00000590115 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
LDLRAD4-213ENST00000590115 PRXQ9BXM0 1461 aa10.39□□□□□ -0.75
LDLRAD4-213ENST00000590115 KIAA0586Q9BVV6 1533 aa10.38□□□□□ -0.75
LDLRAD4-213ENST00000590115 PLB1Q6P1J6 1458 aa10.38□□□□□ -0.75
LDLRAD4-213ENST00000590115 LMTK3Q96Q04 1460 aa10.38□□□□□ -0.75
LDLRAD4-213ENST00000590115 EPRSP07814 1512 aaKnown RBP10.38□□□□□ -0.75
LDLRAD4-213ENST00000590115 ZCCHC11Q5TAX3 1644 aaKnown RBP10.37□□□□□ -0.75
LDLRAD4-213ENST00000590115 ADAMTSL3P82987 1691 aa10.35□□□□□ -0.75
LDLRAD4-213ENST00000590115 UHRF1BP1LA0JNW5 1464 aa10.35□□□□□ -0.75
LDLRAD4-213ENST00000590115 TEX14Q8IWB6 1497 aa10.35□□□□□ -0.75
LDLRAD4-213ENST00000590115 CARMIL1Q5VZK9 1371 aa10.33□□□□□ -0.76
LDLRAD4-213ENST00000590115 CFAP43Q8NDM7 1665 aa10.32□□□□□ -0.76
LDLRAD4-213ENST00000590115 RAPGEF2Q9Y4G8 1499 aa10.32□□□□□ -0.76
LDLRAD4-213ENST00000590115 KDM5BQ9UGL1 1544 aa10.32□□□□□ -0.76
LDLRAD4-213ENST00000590115 PTPRGP23470 1445 aa10.32□□□□□ -0.76
LDLRAD4-213ENST00000590115 PCF11O94913 1555 aaKnown RBP10.31□□□□□ -0.76
LDLRAD4-213ENST00000590115 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
LDLRAD4-213ENST00000590115 FAM9AQ8IZU1 332 aaPredicted RBP10.29□□□□□ -0.76
LDLRAD4-213ENST00000590115 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
LDLRAD4-213ENST00000590115 TNIKQ9UKE5 1360 aa10.28□□□□□ -0.76
LDLRAD4-213ENST00000590115 BCORL1Q5H9F3 1711 aa10.28□□□□□ -0.76
LDLRAD4-213ENST00000590115 IQGAP2Q13576 1575 aa10.28□□□□□ -0.76
LDLRAD4-213ENST00000590115 EEA1Q15075 1411 aa10.28□□□□□ -0.76
LDLRAD4-213ENST00000590115 PTPRMP28827 1452 aa10.28□□□□□ -0.76
LDLRAD4-213ENST00000590115 DISP1Q96F81 1524 aa10.28□□□□□ -0.76
LDLRAD4-213ENST00000590115 MADDQ8WXG6 1647 aa10.27□□□□□ -0.77
LDLRAD4-213ENST00000590115 UACAQ9BZF9 1416 aa10.26□□□□□ -0.77
LDLRAD4-213ENST00000590115 MAGI3Q5TCQ9 1506 aa10.26□□□□□ -0.77
LDLRAD4-213ENST00000590115 SOCS7O14512 581 aa10.25□□□□□ -0.77
LDLRAD4-213ENST00000590115 WDR7Q9Y4E6 1490 aa10.24□□□□□ -0.77
LDLRAD4-213ENST00000590115 SPATA31D1Q6ZQQ2 1576 aa10.23□□□□□ -0.77
LDLRAD4-213ENST00000590115 RIMS1Q86UR5 1692 aaKnown RBP10.23□□□□□ -0.77
LDLRAD4-213ENST00000590115 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
LDLRAD4-213ENST00000590115 TTBK1Q5TCY1 1321 aaPredicted RBP10.22□□□□□ -0.77
LDLRAD4-213ENST00000590115 CARMIL2Q6F5E8 1435 aa10.22□□□□□ -0.77
LDLRAD4-213ENST00000590115 FRMPD1Q5SYB0 1578 aa10.2□□□□□ -0.78
LDLRAD4-213ENST00000590115 SIGLEC1Q9BZZ2 1709 aa10.19□□□□□ -0.78
LDLRAD4-213ENST00000590115 ARAP3Q8WWN8 1544 aa10.19□□□□□ -0.78
LDLRAD4-213ENST00000590115 UGGT2Q9NYU1 1516 aa10.19□□□□□ -0.78
LDLRAD4-213ENST00000590115 DISP3Q9P2K9 1392 aa10.19□□□□□ -0.78
LDLRAD4-213ENST00000590115 CTTNBP2Q8WZ74 1663 aa10.18□□□□□ -0.78
LDLRAD4-213ENST00000590115 CD109Q6YHK3 1445 aa10.17□□□□□ -0.78
LDLRAD4-213ENST00000590115 LOC105371045A0A1W2PR82 267 aa10.17□□□□□ -0.78
LDLRAD4-213ENST00000590115 GOLGA3Q08378 1498 aa10.17□□□□□ -0.78
LDLRAD4-213ENST00000590115 ABCA8O94911 1581 aa10.15□□□□□ -0.78
LDLRAD4-213ENST00000590115 SAMD9Q5K651 1589 aa10.15□□□□□ -0.78
LDLRAD4-213ENST00000590115 STRCQ7RTU9 1775 aa10.14□□□□□ -0.79
LDLRAD4-213ENST00000590115 ABCA9Q8IUA7 1624 aa10.14□□□□□ -0.79
LDLRAD4-213ENST00000590115 ARHGEF40Q8TER5 1519 aa10.13□□□□□ -0.79
LDLRAD4-213ENST00000590115 CERKQ8TCT0 537 aa10.13□□□□□ -0.79
LDLRAD4-213ENST00000590115 EHMT2Q96KQ7 1210 aa10.13□□□□□ -0.79
LDLRAD4-213ENST00000590115 FER1L4A9Z1Z3 1794 aa10.13□□□□□ -0.79
LDLRAD4-213ENST00000590115 RICTORQ6R327 1708 aa10.13□□□□□ -0.79
LDLRAD4-213ENST00000590115 ARHGAP35Q9NRY4 1499 aa10.11□□□□□ -0.79
LDLRAD4-213ENST00000590115 PREX1Q8TCU6 1659 aa10.1□□□□□ -0.79
LDLRAD4-213ENST00000590115 HSPA2P54652 639 aa10.1□□□□□ -0.79
LDLRAD4-213ENST00000590115 TTC37Q6PGP7 1564 aa10.09□□□□□ -0.79
LDLRAD4-213ENST00000590115 FHOD3Q2V2M9 1422 aa10.06□□□□□ -0.8
LDLRAD4-213ENST00000590115 NEO1Q92859 1461 aa10.04□□□□□ -0.8
LDLRAD4-213ENST00000590115 KCNH8Q96L42 1107 aa10.04□□□□□ -0.8
LDLRAD4-213ENST00000590115 RAPGEF3O95398 923 aa10.03□□□□□ -0.8
LDLRAD4-213ENST00000590115 SETD1BQ9UPS6 1966 aaKnown RBP10.03□□□□□ -0.8
LDLRAD4-213ENST00000590115 CEP162Q5TB80 1403 aa10.02□□□□□ -0.81
LDLRAD4-213ENST00000590115 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
LDLRAD4-213ENST00000590115 EFCAB5A4FU69 1503 aa10.02□□□□□ -0.81
LDLRAD4-213ENST00000590115 ZMYM4Q5VZL5 1548 aa10.02□□□□□ -0.81
LDLRAD4-213ENST00000590115 LRRIQ1Q96JM4 1722 aa10.02□□□□□ -0.81
LDLRAD4-213ENST00000590115 PHLDB1Q86UU1 1377 aa10.01□□□□□ -0.81
LDLRAD4-213ENST00000590115 LTBP4Q8N2S1 1624 aa10.01□□□□□ -0.81
LDLRAD4-213ENST00000590115 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
LDLRAD4-213ENST00000590115 ATP10BO94823 1461 aa9.99□□□□□ -0.81
LDLRAD4-213ENST00000590115 CLIP1P30622 1438 aa9.99□□□□□ -0.81
LDLRAD4-213ENST00000590115 FANCAO15360 1455 aa9.98□□□□□ -0.81
LDLRAD4-213ENST00000590115 NUP153P49790 1475 aaKnown RBP9.98□□□□□ -0.81
LDLRAD4-213ENST00000590115 ARHGEF12Q9NZN5 1544 aa9.98□□□□□ -0.81
LDLRAD4-213ENST00000590115 RANGAP1P46060 587 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms