RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 NISCHQ9Y2I1 1504 aa14.93□□□□□ -0.02
LDLRAD4-213ENST00000590115 ABCC9O60706 1549 aa13.97□□□□□ -0.17
LDLRAD4-213ENST00000590115 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
LDLRAD4-213ENST00000590115 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
LDLRAD4-213ENST00000590115 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
LDLRAD4-213ENST00000590115 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
LDLRAD4-213ENST00000590115 NACADO15069 1562 aa12.91□□□□□ -0.34
LDLRAD4-213ENST00000590115 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
LDLRAD4-213ENST00000590115 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
LDLRAD4-213ENST00000590115 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
LDLRAD4-213ENST00000590115 CC2D2AQ9P2K1 1620 aa12.68□□□□□ -0.38
LDLRAD4-213ENST00000590115 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
LDLRAD4-213ENST00000590115 MYO15BQ96JP2 1530 aa12.58□□□□□ -0.4
LDLRAD4-213ENST00000590115 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
LDLRAD4-213ENST00000590115 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
LDLRAD4-213ENST00000590115 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
LDLRAD4-213ENST00000590115 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
LDLRAD4-213ENST00000590115 SCRIBQ14160 1630 aa12.34□□□□□ -0.43
LDLRAD4-213ENST00000590115 DCAF1Q9Y4B6 1507 aa12.34□□□□□ -0.43
LDLRAD4-213ENST00000590115 CUX2O14529 1486 aa12.25□□□□□ -0.45
LDLRAD4-213ENST00000590115 ERCC6Q03468 1493 aa12.04□□□□□ -0.48
LDLRAD4-213ENST00000590115 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
LDLRAD4-213ENST00000590115 NESP48681 1621 aa11.91□□□□□ -0.5
LDLRAD4-213ENST00000590115 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
LDLRAD4-213ENST00000590115 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
LDLRAD4-213ENST00000590115 KIF21AQ7Z4S6 1674 aa11.86□□□□□ -0.51
LDLRAD4-213ENST00000590115 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
LDLRAD4-213ENST00000590115 ATAD2BQ9ULI0 1458 aa11.8□□□□□ -0.52
LDLRAD4-213ENST00000590115 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
LDLRAD4-213ENST00000590115 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
LDLRAD4-213ENST00000590115 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
LDLRAD4-213ENST00000590115 BAZ1AQ9NRL2 1556 aaPredicted RBP11.71□□□□□ -0.53
LDLRAD4-213ENST00000590115 PEG3Q9GZU2 1588 aa11.64□□□□□ -0.55
LDLRAD4-213ENST00000590115 WDR62O43379 1518 aa11.64□□□□□ -0.55
LDLRAD4-213ENST00000590115 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
LDLRAD4-213ENST00000590115 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
LDLRAD4-213ENST00000590115 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
LDLRAD4-213ENST00000590115 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
LDLRAD4-213ENST00000590115 MRC2Q9UBG0 1479 aa11.58□□□□□ -0.56
LDLRAD4-213ENST00000590115 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
LDLRAD4-213ENST00000590115 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
LDLRAD4-213ENST00000590115 RSF1Q96T23 1441 aaPredicted RBP11.46□□□□□ -0.57
LDLRAD4-213ENST00000590115 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
LDLRAD4-213ENST00000590115 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
LDLRAD4-213ENST00000590115 CADPSQ9ULU8 1353 aa11.45□□□□□ -0.58
LDLRAD4-213ENST00000590115 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
LDLRAD4-213ENST00000590115 WIZO95785 1651 aa11.42□□□□□ -0.58
LDLRAD4-213ENST00000590115 URB2Q14146 1524 aaKnown RBP11.37□□□□□ -0.59
LDLRAD4-213ENST00000590115 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
LDLRAD4-213ENST00000590115 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
LDLRAD4-213ENST00000590115 CHD1O14646 1710 aa11.34□□□□□ -0.59
LDLRAD4-213ENST00000590115 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
LDLRAD4-213ENST00000590115 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
LDLRAD4-213ENST00000590115 CFTRP13569 1480 aa11.29□□□□□ -0.6
LDLRAD4-213ENST00000590115 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
LDLRAD4-213ENST00000590115 TOP2AP11388 1531 aaKnown RBP11.25□□□□□ -0.61
LDLRAD4-213ENST00000590115 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
LDLRAD4-213ENST00000590115 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
LDLRAD4-213ENST00000590115 AEBP2Q6ZN18 517 aaPredicted RBP11.22□□□□□ -0.61
LDLRAD4-213ENST00000590115 IFT140Q96RY7 1462 aa11.2□□□□□ -0.62
LDLRAD4-213ENST00000590115 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
LDLRAD4-213ENST00000590115 TARBP1Q13395 1621 aaKnown RBP11.15□□□□□ -0.62
LDLRAD4-213ENST00000590115 TOPBP1Q92547 1522 aa11.14□□□□□ -0.63
LDLRAD4-213ENST00000590115 CLASP1Q7Z460 1538 aa11.13□□□□□ -0.63
LDLRAD4-213ENST00000590115 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
LDLRAD4-213ENST00000590115 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
LDLRAD4-213ENST00000590115 AQRO60306 1485 aaKnown RBP eCLIP11.07□□□□□ -0.64
LDLRAD4-213ENST00000590115 KIF13AQ9H1H9 1805 aa11.04□□□□□ -0.64
LDLRAD4-213ENST00000590115 SYNJ1O43426 1573 aa11□□□□□ -0.65
LDLRAD4-213ENST00000590115 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
LDLRAD4-213ENST00000590115 ABCC8Q09428 1581 aa10.99□□□□□ -0.65
LDLRAD4-213ENST00000590115 SNAPC4Q5SXM2 1469 aa10.98□□□□□ -0.65
LDLRAD4-213ENST00000590115 WDR97A6NE52 1622 aa10.96□□□□□ -0.65
LDLRAD4-213ENST00000590115 FBLN2P98095 1184 aa10.95□□□□□ -0.66
LDLRAD4-213ENST00000590115 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
LDLRAD4-213ENST00000590115 GAPVD1Q14C86 1478 aa10.94□□□□□ -0.66
LDLRAD4-213ENST00000590115 RAD54L2Q9Y4B4 1467 aa10.94□□□□□ -0.66
LDLRAD4-213ENST00000590115 ERCC6L2Q5T890 1561 aa10.93□□□□□ -0.66
LDLRAD4-213ENST00000590115 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
LDLRAD4-213ENST00000590115 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
LDLRAD4-213ENST00000590115 TDRD9Q8NDG6 1382 aaKnown RBP10.89□□□□□ -0.67
LDLRAD4-213ENST00000590115 SYNJ2O15056 1496 aa10.88□□□□□ -0.67
LDLRAD4-213ENST00000590115 FGD5Q6ZNL6 1462 aa10.85□□□□□ -0.67
LDLRAD4-213ENST00000590115 GRIN2BQ13224 1484 aa10.84□□□□□ -0.67
LDLRAD4-213ENST00000590115 SHROOM2Q13796 1616 aa10.84□□□□□ -0.67
LDLRAD4-213ENST00000590115 SOGA1O94964 1423 aa10.84□□□□□ -0.67
LDLRAD4-213ENST00000590115 CEP170Q5SW79 1584 aa10.82□□□□□ -0.68
LDLRAD4-213ENST00000590115 ABCA5Q8WWZ7 1642 aa10.82□□□□□ -0.68
LDLRAD4-213ENST00000590115 CUX1P39880 1505 aa10.82□□□□□ -0.68
LDLRAD4-213ENST00000590115 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
LDLRAD4-213ENST00000590115 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
LDLRAD4-213ENST00000590115 TSPOAP1O95153 1857 aa10.77□□□□□ -0.69
LDLRAD4-213ENST00000590115 DIP2BQ9P265 1576 aa10.77□□□□□ -0.69
LDLRAD4-213ENST00000590115 KDM6BO15054 1643 aa10.76□□□□□ -0.69
LDLRAD4-213ENST00000590115 ADAMTS12P58397 1594 aa10.75□□□□□ -0.69
LDLRAD4-213ENST00000590115 GRIN2AQ12879 1464 aa10.74□□□□□ -0.69
LDLRAD4-213ENST00000590115 NUP160Q12769 1436 aa10.73□□□□□ -0.69
LDLRAD4-213ENST00000590115 ABCC10Q5T3U5 1492 aa10.73□□□□□ -0.69
LDLRAD4-213ENST00000590115 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
LDLRAD4-213ENST00000590115 MAPKBP1O60336 1514 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms