RNA–Protein interactions for RNA: ENST00000589871.1

RBM42-205, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,487 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-205ENST00000589871 KIAA0586Q9BVV6 1533 aa40.57■■■■■ 4.09
RBM42-205ENST00000589871 ERCC6L2Q5T890 1561 aa40.57■■■■■ 4.08
RBM42-205ENST00000589871 RAPGEF2Q9Y4G8 1499 aa40.55■■■■■ 4.08
RBM42-205ENST00000589871 PRG4Q92954 1404 aaPredicted RBP40.5■■■■■ 4.07
RBM42-205ENST00000589871 CHIC1Q5VXU3 224 aa40.45■■■■■ 4.07
RBM42-205ENST00000589871 PRXQ9BXM0 1461 aa40.37■■■■■ 4.05
RBM42-205ENST00000589871 EEA1Q15075 1411 aa40.36■■■■■ 4.05
RBM42-205ENST00000589871 IQGAP2Q13576 1575 aa40.35■■■■■ 4.05
RBM42-205ENST00000589871 CSRNP3Q8WYN3 585 aa40.32■■■■■ 4.05
RBM42-205ENST00000589871 CTTNBP2Q8WZ74 1663 aa40.2■■■■■ 4.03
RBM42-205ENST00000589871 FAM9AQ8IZU1 332 aaPredicted RBP40.17■■■■■ 4.02
RBM42-205ENST00000589871 CARMIL2Q6F5E8 1435 aa40.16■■■■■ 4.02
RBM42-205ENST00000589871 UGGT2Q9NYU1 1516 aa40.11■■■■■ 4.01
RBM42-205ENST00000589871 DISP1Q96F81 1524 aa40.04■■■■■ 4
RBM42-205ENST00000589871 TNIKQ9UKE5 1360 aa40.02■■■■■ 4
RBM42-205ENST00000589871 PTPRGP23470 1445 aa40.01■■■■■ 4
RBM42-205ENST00000589871 TRHP20396 242 aaPredicted RBP39.98■■■■□ 3.99
RBM42-205ENST00000589871 KIAA0556O60303 1618 aa39.95■■■■□ 3.99
RBM42-205ENST00000589871 KIF21BO75037 1637 aa39.95■■■■□ 3.99
RBM42-205ENST00000589871 TTBK1Q5TCY1 1321 aaPredicted RBP39.93■■■■□ 3.98
RBM42-205ENST00000589871 GOLGA3Q08378 1498 aa39.9■■■■□ 3.98
RBM42-205ENST00000589871 ADCY10Q96PN6 1610 aa39.9■■■■□ 3.98
RBM42-205ENST00000589871 NPM1P06748 294 aaKnown RBP eCLIP39.83■■■■□ 3.97
RBM42-205ENST00000589871 UACAQ9BZF9 1416 aa39.73■■■■□ 3.95
RBM42-205ENST00000589871 UHRF1BP1LA0JNW5 1464 aa39.7■■■■□ 3.95
RBM42-205ENST00000589871 MAPKBP1O60336 1514 aa39.68■■■■□ 3.94
RBM42-205ENST00000589871 ABCC2Q92887 1545 aa39.67■■■■□ 3.94
RBM42-205ENST00000589871 EHMT2Q96KQ7 1210 aa39.66■■■■□ 3.94
RBM42-205ENST00000589871 SAMD9Q5K651 1589 aa39.65■■■■□ 3.94
RBM42-205ENST00000589871 UBTFP17480 764 aaKnown RBP39.62■■■■□ 3.93
RBM42-205ENST00000589871 P3H3Q8IVL6 736 aa39.61■■■■□ 3.93
RBM42-205ENST00000589871 RANGAP1P46060 587 aaPredicted RBP39.58■■■■□ 3.93
RBM42-205ENST00000589871 PLB1Q6P1J6 1458 aa39.56■■■■□ 3.92
RBM42-205ENST00000589871 KIF13AQ9H1H9 1805 aa39.53■■■■□ 3.92
RBM42-205ENST00000589871 KDM5BQ9UGL1 1544 aa39.52■■■■□ 3.92
RBM42-205ENST00000589871 ABCA8O94911 1581 aa39.52■■■■□ 3.92
RBM42-205ENST00000589871 ABCC10Q5T3U5 1492 aa39.5■■■■□ 3.91
RBM42-205ENST00000589871 EFCAB5A4FU69 1503 aa39.47■■■■□ 3.91
RBM42-205ENST00000589871 ZCCHC11Q5TAX3 1644 aaKnown RBP39.45■■■■□ 3.91
RBM42-205ENST00000589871 DIP2BQ9P265 1576 aa39.44■■■■□ 3.9
RBM42-205ENST00000589871 FAM69CQ0P6D2 419 aa39.43■■■■□ 3.9
RBM42-205ENST00000589871 ASXL2Q76L83 1435 aa39.42■■■■□ 3.9
RBM42-205ENST00000589871 FHOD3Q2V2M9 1422 aa39.41■■■■□ 3.9
RBM42-205ENST00000589871 RAPGEF6Q8TEU7 1601 aa39.3■■■■□ 3.88
RBM42-205ENST00000589871 ARHGAP35Q9NRY4 1499 aa39.24■■■■□ 3.87
RBM42-205ENST00000589871 WDR7Q9Y4E6 1490 aa39.21■■■■□ 3.87
RBM42-205ENST00000589871 GLI2P10070 1586 aa39.2■■■■□ 3.87
RBM42-205ENST00000589871 ATP10BO94823 1461 aa39.19■■■■□ 3.86
RBM42-205ENST00000589871 EPRSP07814 1512 aaKnown RBP39.18■■■■□ 3.86
RBM42-205ENST00000589871 ARID3CA6NKF2 412 aa39.18■■■■□ 3.86
RBM42-205ENST00000589871 TSPOAP1O95153 1857 aa39.15■■■■□ 3.86
RBM42-205ENST00000589871 NUP153P49790 1475 aaKnown RBP39.15■■■■□ 3.86
RBM42-205ENST00000589871 FMN1Q68DA7 1419 aa39.11■■■■□ 3.85
RBM42-205ENST00000589871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.05■■■■□ 3.84
RBM42-205ENST00000589871 HNRNPUL2Q1KMD3 747 aaKnown RBP39.05■■■■□ 3.84
RBM42-205ENST00000589871 KCNH8Q96L42 1107 aa39.04■■■■□ 3.84
RBM42-205ENST00000589871 MAP3K4Q9Y6R4 1608 aa39.03■■■■□ 3.84
RBM42-205ENST00000589871 CLIP1P30622 1438 aa38.98■■■■□ 3.83
RBM42-205ENST00000589871 PPRC1Q5VV67 1664 aaKnown RBP38.97■■■■□ 3.83
RBM42-205ENST00000589871 HECW1Q76N89 1606 aa38.94■■■■□ 3.82
RBM42-205ENST00000589871 CFAP43Q8NDM7 1665 aa38.92■■■■□ 3.82
RBM42-205ENST00000589871 ATP1B4Q9UN42 357 aaPredicted RBP38.92■■■■□ 3.82
RBM42-205ENST00000589871 CD109Q6YHK3 1445 aa38.86■■■■□ 3.81
RBM42-205ENST00000589871 PLEKHD1A6NEE1 506 aa38.86■■■■□ 3.81
RBM42-205ENST00000589871 TEX14Q8IWB6 1497 aa38.86■■■■□ 3.81
RBM42-205ENST00000589871 CDK13Q14004 1512 aaKnown RBP38.86■■■■□ 3.81
RBM42-205ENST00000589871 KDM6BO15054 1643 aa38.85■■■■□ 3.81
RBM42-205ENST00000589871 LOC105371045A0A1W2PR82 267 aa38.81■■■■□ 3.8
RBM42-205ENST00000589871 ABCA9Q8IUA7 1624 aa38.79■■■■□ 3.8
RBM42-205ENST00000589871 MAGI3Q5TCQ9 1506 aa38.79■■■■□ 3.8
RBM42-205ENST00000589871 CEP162Q5TB80 1403 aa38.78■■■■□ 3.8
RBM42-205ENST00000589871 PCF11O94913 1555 aaKnown RBP38.77■■■■□ 3.8
RBM42-205ENST00000589871 CASKIN1Q8WXD9 1431 aa38.77■■■■□ 3.8
RBM42-205ENST00000589871 LRRIQ1Q96JM4 1722 aa38.72■■■■□ 3.79
RBM42-205ENST00000589871 CDK11AQ9UQ88 783 aaPredicted RBP38.71■■■■□ 3.79
RBM42-205ENST00000589871 FYCO1Q9BQS8 1478 aa38.69■■■■□ 3.78
RBM42-205ENST00000589871 CCDC18Q5T9S5 1454 aa38.65■■■■□ 3.78
RBM42-205ENST00000589871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.61■■■■□ 3.77
RBM42-205ENST00000589871 COL17A1Q9UMD9 1497 aaPredicted RBP38.59■■■■□ 3.77
RBM42-205ENST00000589871 TTC37Q6PGP7 1564 aa38.56■■■■□ 3.76
RBM42-205ENST00000589871 TROQ12816 1431 aaPredicted RBP38.55■■■■□ 3.76
RBM42-205ENST00000589871 PHLDB1Q86UU1 1377 aa38.51■■■■□ 3.75
RBM42-205ENST00000589871 KIF14Q15058 1648 aa38.5■■■■□ 3.75
RBM42-205ENST00000589871 NEO1Q92859 1461 aa38.49■■■■□ 3.75
RBM42-205ENST00000589871 ARAP3Q8WWN8 1544 aa38.45■■■■□ 3.75
RBM42-205ENST00000589871 CFAP74Q9C0B2 1584 aa38.4■■■■□ 3.74
RBM42-205ENST00000589871 FANCAO15360 1455 aa38.4■■■■□ 3.74
RBM42-205ENST00000589871 MYO5CQ9NQX4 1742 aa38.39■■■■□ 3.74
RBM42-205ENST00000589871 PLCH2O75038 1416 aa38.38■■■■□ 3.73
RBM42-205ENST00000589871 AKNAQ7Z591 1439 aa38.32■■■■□ 3.73
RBM42-205ENST00000589871 VPS8Q8N3P4 1428 aa38.32■■■■□ 3.73
RBM42-205ENST00000589871 RAPGEF3O95398 923 aa38.25■■■■□ 3.71
RBM42-205ENST00000589871 MTUS2Q5JR59 1369 aa38.25■■■■□ 3.71
RBM42-205ENST00000589871 EFCAB2Q5VUJ9 269 aa38.24■■■■□ 3.71
RBM42-205ENST00000589871 DENND4BO75064 1496 aaPredicted RBP38.22■■■■□ 3.71
RBM42-205ENST00000589871 ARHGAP5Q13017 1502 aa38.22■■■■□ 3.71
RBM42-205ENST00000589871 ADGRL1O94910 1474 aa38.19■■■■□ 3.7
RBM42-205ENST00000589871 CDC42BPBQ9Y5S2 1711 aa38.19■■■■□ 3.7
RBM42-205ENST00000589871 FRMPD1Q5SYB0 1578 aa38.19■■■■□ 3.7
RBM42-205ENST00000589871 PREX2Q70Z35 1606 aa38.18■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms