RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 KIAA0586Q9BVV6 1533 aa29.71■■■□□ 2.35
H3F3B-207ENST00000589417 RAPGEF2Q9Y4G8 1499 aa29.65■■■□□ 2.34
H3F3B-207ENST00000589417 PRG4Q92954 1404 aaPredicted RBP29.62■■■□□ 2.33
H3F3B-207ENST00000589417 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
H3F3B-207ENST00000589417 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
H3F3B-207ENST00000589417 PRXQ9BXM0 1461 aa29.57■■■□□ 2.32
H3F3B-207ENST00000589417 EEA1Q15075 1411 aa29.54■■■□□ 2.32
H3F3B-207ENST00000589417 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
H3F3B-207ENST00000589417 IQGAP2Q13576 1575 aa29.43■■■□□ 2.3
H3F3B-207ENST00000589417 CARMIL2Q6F5E8 1435 aa29.37■■■□□ 2.29
H3F3B-207ENST00000589417 UGGT2Q9NYU1 1516 aa29.35■■■□□ 2.29
H3F3B-207ENST00000589417 DISP1Q96F81 1524 aa29.3■■■□□ 2.28
H3F3B-207ENST00000589417 TNIKQ9UKE5 1360 aa29.29■■■□□ 2.28
H3F3B-207ENST00000589417 PTPRGP23470 1445 aa29.28■■■□□ 2.28
H3F3B-207ENST00000589417 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
H3F3B-207ENST00000589417 CTTNBP2Q8WZ74 1663 aa29.21■■■□□ 2.27
H3F3B-207ENST00000589417 GOLGA3Q08378 1498 aa29.17■■■□□ 2.26
H3F3B-207ENST00000589417 TRHP20396 242 aaPredicted RBP29.16■■■□□ 2.26
H3F3B-207ENST00000589417 KIAA0556O60303 1618 aa29.15■■■□□ 2.26
H3F3B-207ENST00000589417 KIF21BO75037 1637 aa29.15■■■□□ 2.26
H3F3B-207ENST00000589417 ADCY10Q96PN6 1610 aa29.12■■■□□ 2.25
H3F3B-207ENST00000589417 NPM1P06748 294 aaKnown RBP eCLIP29.11■■■□□ 2.25
H3F3B-207ENST00000589417 UHRF1BP1LA0JNW5 1464 aa29.1■■■□□ 2.25
H3F3B-207ENST00000589417 UACAQ9BZF9 1416 aa29.08■■■□□ 2.25
H3F3B-207ENST00000589417 MAPKBP1O60336 1514 aa29.04■■■□□ 2.24
H3F3B-207ENST00000589417 TTBK1Q5TCY1 1321 aaPredicted RBP29.03■■■□□ 2.24
H3F3B-207ENST00000589417 ABCC2Q92887 1545 aa29.02■■■□□ 2.24
H3F3B-207ENST00000589417 SAMD9Q5K651 1589 aa28.96■■■□□ 2.23
H3F3B-207ENST00000589417 KDM5BQ9UGL1 1544 aa28.94■■■□□ 2.22
H3F3B-207ENST00000589417 ABCC10Q5T3U5 1492 aa28.92■■■□□ 2.22
H3F3B-207ENST00000589417 UBTFP17480 764 aaKnown RBP28.9■■■□□ 2.22
H3F3B-207ENST00000589417 PLB1Q6P1J6 1458 aa28.9■■■□□ 2.22
H3F3B-207ENST00000589417 ABCA8O94911 1581 aa28.89■■■□□ 2.22
H3F3B-207ENST00000589417 P3H3Q8IVL6 736 aa28.88■■■□□ 2.21
H3F3B-207ENST00000589417 FAM69CQ0P6D2 419 aa28.83■■■□□ 2.21
H3F3B-207ENST00000589417 EFCAB5A4FU69 1503 aa28.83■■■□□ 2.21
H3F3B-207ENST00000589417 ASXL2Q76L83 1435 aa28.82■■■□□ 2.2
H3F3B-207ENST00000589417 DIP2BQ9P265 1576 aa28.79■■■□□ 2.2
H3F3B-207ENST00000589417 KIF13AQ9H1H9 1805 aa28.77■■■□□ 2.2
H3F3B-207ENST00000589417 RANGAP1P46060 587 aaPredicted RBP28.76■■■□□ 2.19
H3F3B-207ENST00000589417 EHMT2Q96KQ7 1210 aa28.76■■■□□ 2.19
H3F3B-207ENST00000589417 FHOD3Q2V2M9 1422 aa28.76■■■□□ 2.19
H3F3B-207ENST00000589417 ZCCHC11Q5TAX3 1644 aaKnown RBP28.74■■■□□ 2.19
H3F3B-207ENST00000589417 GLI2P10070 1586 aa28.7■■■□□ 2.18
H3F3B-207ENST00000589417 ATP10BO94823 1461 aa28.68■■■□□ 2.18
H3F3B-207ENST00000589417 ARHGAP35Q9NRY4 1499 aa28.68■■■□□ 2.18
H3F3B-207ENST00000589417 WDR7Q9Y4E6 1490 aa28.66■■■□□ 2.18
H3F3B-207ENST00000589417 EPRSP07814 1512 aaKnown RBP28.66■■■□□ 2.18
H3F3B-207ENST00000589417 RAPGEF6Q8TEU7 1601 aa28.65■■■□□ 2.18
H3F3B-207ENST00000589417 NUP153P49790 1475 aaKnown RBP28.62■■■□□ 2.17
H3F3B-207ENST00000589417 FMN1Q68DA7 1419 aa28.6■■■□□ 2.17
H3F3B-207ENST00000589417 ARID3CA6NKF2 412 aa28.52■■■□□ 2.16
H3F3B-207ENST00000589417 KCNH8Q96L42 1107 aa28.49■■■□□ 2.15
H3F3B-207ENST00000589417 MAP3K4Q9Y6R4 1608 aa28.48■■■□□ 2.15
H3F3B-207ENST00000589417 CLIP1P30622 1438 aa28.46■■■□□ 2.15
H3F3B-207ENST00000589417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.45■■■□□ 2.14
H3F3B-207ENST00000589417 HNRNPUL2Q1KMD3 747 aaKnown RBP28.45■■■□□ 2.14
H3F3B-207ENST00000589417 PLEKHD1A6NEE1 506 aa28.43■■■□□ 2.14
H3F3B-207ENST00000589417 CD109Q6YHK3 1445 aa28.43■■■□□ 2.14
H3F3B-207ENST00000589417 PPRC1Q5VV67 1664 aaKnown RBP28.42■■■□□ 2.14
H3F3B-207ENST00000589417 MAGI3Q5TCQ9 1506 aa28.41■■■□□ 2.14
H3F3B-207ENST00000589417 TEX14Q8IWB6 1497 aa28.4■■■□□ 2.14
H3F3B-207ENST00000589417 TSPOAP1O95153 1857 aa28.38■■■□□ 2.13
H3F3B-207ENST00000589417 CASKIN1Q8WXD9 1431 aa28.37■■■□□ 2.13
H3F3B-207ENST00000589417 HECW1Q76N89 1606 aa28.37■■■□□ 2.13
H3F3B-207ENST00000589417 CFAP43Q8NDM7 1665 aa28.37■■■□□ 2.13
H3F3B-207ENST00000589417 ABCA9Q8IUA7 1624 aa28.33■■■□□ 2.13
H3F3B-207ENST00000589417 CDK13Q14004 1512 aaKnown RBP28.33■■■□□ 2.13
H3F3B-207ENST00000589417 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
H3F3B-207ENST00000589417 ATP1B4Q9UN42 357 aaPredicted RBP28.31■■■□□ 2.12
H3F3B-207ENST00000589417 CDK11AQ9UQ88 783 aaPredicted RBP28.31■■■□□ 2.12
H3F3B-207ENST00000589417 KDM6BO15054 1643 aa28.31■■■□□ 2.12
H3F3B-207ENST00000589417 CEP162Q5TB80 1403 aa28.3■■■□□ 2.12
H3F3B-207ENST00000589417 COL17A1Q9UMD9 1497 aaPredicted RBP28.27■■■□□ 2.12
H3F3B-207ENST00000589417 PHLDB1Q86UU1 1377 aa28.26■■■□□ 2.12
H3F3B-207ENST00000589417 FYCO1Q9BQS8 1478 aa28.26■■■□□ 2.11
H3F3B-207ENST00000589417 CCDC18Q5T9S5 1454 aa28.23■■■□□ 2.11
H3F3B-207ENST00000589417 PCF11O94913 1555 aaKnown RBP28.23■■■□□ 2.11
H3F3B-207ENST00000589417 TROQ12816 1431 aaPredicted RBP28.2■■■□□ 2.11
H3F3B-207ENST00000589417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.19■■■□□ 2.16e-11■■■□□ 18.3
H3F3B-207ENST00000589417 NEO1Q92859 1461 aa28.18■■■□□ 2.1
H3F3B-207ENST00000589417 ARAP3Q8WWN8 1544 aa28.17■■■□□ 2.1
H3F3B-207ENST00000589417 LRRIQ1Q96JM4 1722 aa28.15■■■□□ 2.1
H3F3B-207ENST00000589417 PLCH2O75038 1416 aa28.1■■■□□ 2.09
H3F3B-207ENST00000589417 TTC37Q6PGP7 1564 aa28.09■■■□□ 2.09
H3F3B-207ENST00000589417 FANCAO15360 1455 aa28.05■■■□□ 2.08
H3F3B-207ENST00000589417 KIF14Q15058 1648 aa28.04■■■□□ 2.08
H3F3B-207ENST00000589417 AKNAQ7Z591 1439 aa28.03■■■□□ 2.08
H3F3B-207ENST00000589417 VPS8Q8N3P4 1428 aa28■■■□□ 2.07
H3F3B-207ENST00000589417 EFCAB2Q5VUJ9 269 aa27.99■■■□□ 2.07
H3F3B-207ENST00000589417 CFAP74Q9C0B2 1584 aa27.98■■■□□ 2.07
H3F3B-207ENST00000589417 RAPGEF3O95398 923 aa27.96■■■□□ 2.07
H3F3B-207ENST00000589417 DENND4BO75064 1496 aaPredicted RBP27.95■■■□□ 2.06
H3F3B-207ENST00000589417 MTUS2Q5JR59 1369 aa27.91■■■□□ 2.06
H3F3B-207ENST00000589417 MYO5CQ9NQX4 1742 aa27.9■■■□□ 2.06
H3F3B-207ENST00000589417 FRMPD1Q5SYB0 1578 aa27.88■■■□□ 2.05
H3F3B-207ENST00000589417 SCAPERQ9BY12 1400 aa27.88■■■□□ 2.05
H3F3B-207ENST00000589417 ADGRL1O94910 1474 aa27.88■■■□□ 2.05
H3F3B-207ENST00000589417 ARHGAP5Q13017 1502 aa27.85■■■□□ 2.05
H3F3B-207ENST00000589417 MAP3K1Q13233 1512 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms