RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 ERCC6L2Q5T890 1561 aa33.62■■■□□ 2.97
LINC00654-202ENST00000589201 KIAA0586Q9BVV6 1533 aa33.54■■■□□ 2.96
LINC00654-202ENST00000589201 PRG4Q92954 1404 aaPredicted RBP33.53■■■□□ 2.96
LINC00654-202ENST00000589201 RAPGEF2Q9Y4G8 1499 aa33.5■■■□□ 2.95
LINC00654-202ENST00000589201 CHIC1Q5VXU3 224 aa33.43■■■□□ 2.94
LINC00654-202ENST00000589201 PRXQ9BXM0 1461 aa33.35■■■□□ 2.93
LINC00654-202ENST00000589201 CSRNP3Q8WYN3 585 aa33.34■■■□□ 2.93
LINC00654-202ENST00000589201 IQGAP2Q13576 1575 aa33.31■■■□□ 2.92
LINC00654-202ENST00000589201 EEA1Q15075 1411 aa33.26■■■□□ 2.91
LINC00654-202ENST00000589201 FAM9AQ8IZU1 332 aaPredicted RBP33.25■■■□□ 2.91
LINC00654-202ENST00000589201 TRHP20396 242 aaPredicted RBP33.2■■■□□ 2.91
LINC00654-202ENST00000589201 CARMIL2Q6F5E8 1435 aa33.19■■■□□ 2.9
LINC00654-202ENST00000589201 CTTNBP2Q8WZ74 1663 aa33.13■■■□□ 2.89
LINC00654-202ENST00000589201 UGGT2Q9NYU1 1516 aa33.13■■■□□ 2.89
LINC00654-202ENST00000589201 TTBK1Q5TCY1 1321 aaPredicted RBP33.13■■■□□ 2.89
LINC00654-202ENST00000589201 DISP1Q96F81 1524 aa33.12■■■□□ 2.89
LINC00654-202ENST00000589201 PTPRGP23470 1445 aa33.11■■■□□ 2.89
LINC00654-202ENST00000589201 TNIKQ9UKE5 1360 aa33.11■■■□□ 2.89
LINC00654-202ENST00000589201 ADCY10Q96PN6 1610 aa33.01■■■□□ 2.87
LINC00654-202ENST00000589201 KIAA0556O60303 1618 aa32.99■■■□□ 2.87
LINC00654-202ENST00000589201 NPM1P06748 294 aaKnown RBP eCLIP32.99■■■□□ 2.87
LINC00654-202ENST00000589201 GOLGA3Q08378 1498 aa32.93■■■□□ 2.86
LINC00654-202ENST00000589201 KIF21BO75037 1637 aa32.92■■■□□ 2.86
LINC00654-202ENST00000589201 UACAQ9BZF9 1416 aa32.87■■■□□ 2.85
LINC00654-202ENST00000589201 EHMT2Q96KQ7 1210 aa32.85■■■□□ 2.85
LINC00654-202ENST00000589201 P3H3Q8IVL6 736 aa32.83■■■□□ 2.85
LINC00654-202ENST00000589201 UHRF1BP1LA0JNW5 1464 aa32.82■■■□□ 2.84
LINC00654-202ENST00000589201 MAPKBP1O60336 1514 aa32.8■■■□□ 2.84
LINC00654-202ENST00000589201 ABCC2Q92887 1545 aa32.8■■■□□ 2.84
LINC00654-202ENST00000589201 RANGAP1P46060 587 aaPredicted RBP32.79■■■□□ 2.84
LINC00654-202ENST00000589201 UBTFP17480 764 aaKnown RBP32.76■■■□□ 2.83
LINC00654-202ENST00000589201 PLB1Q6P1J6 1458 aa32.74■■■□□ 2.83
LINC00654-202ENST00000589201 SAMD9Q5K651 1589 aa32.73■■■□□ 2.83
LINC00654-202ENST00000589201 FAM69CQ0P6D2 419 aa32.71■■■□□ 2.83
LINC00654-202ENST00000589201 KIF13AQ9H1H9 1805 aa32.71■■■□□ 2.83
LINC00654-202ENST00000589201 ABCC10Q5T3U5 1492 aa32.71■■■□□ 2.83
LINC00654-202ENST00000589201 KDM5BQ9UGL1 1544 aa32.67■■■□□ 2.82
LINC00654-202ENST00000589201 ABCA8O94911 1581 aa32.66■■■□□ 2.82
LINC00654-202ENST00000589201 ASXL2Q76L83 1435 aa32.63■■■□□ 2.81
LINC00654-202ENST00000589201 DIP2BQ9P265 1576 aa32.62■■■□□ 2.81
LINC00654-202ENST00000589201 ZCCHC11Q5TAX3 1644 aaKnown RBP32.61■■■□□ 2.81
LINC00654-202ENST00000589201 FHOD3Q2V2M9 1422 aa32.58■■■□□ 2.81
LINC00654-202ENST00000589201 EFCAB5A4FU69 1503 aa32.54■■■□□ 2.8
LINC00654-202ENST00000589201 ARID3CA6NKF2 412 aa32.49■■■□□ 2.79
LINC00654-202ENST00000589201 RAPGEF6Q8TEU7 1601 aa32.45■■■□□ 2.79
LINC00654-202ENST00000589201 ATP10BO94823 1461 aa32.43■■■□□ 2.78
LINC00654-202ENST00000589201 EPRSP07814 1512 aaKnown RBP32.43■■■□□ 2.78
LINC00654-202ENST00000589201 GLI2P10070 1586 aa32.42■■■□□ 2.78
LINC00654-202ENST00000589201 ARHGAP35Q9NRY4 1499 aa32.42■■■□□ 2.78
LINC00654-202ENST00000589201 WDR7Q9Y4E6 1490 aa32.42■■■□□ 2.78
LINC00654-202ENST00000589201 TSPOAP1O95153 1857 aa32.41■■■□□ 2.78
LINC00654-202ENST00000589201 KCNH8Q96L42 1107 aa32.36■■■□□ 2.77
LINC00654-202ENST00000589201 NUP153P49790 1475 aaKnown RBP32.35■■■□□ 2.77
LINC00654-202ENST00000589201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.32■■■□□ 2.76
LINC00654-202ENST00000589201 HNRNPUL2Q1KMD3 747 aaKnown RBP32.32■■■□□ 2.76
LINC00654-202ENST00000589201 FMN1Q68DA7 1419 aa32.27■■■□□ 2.76
LINC00654-202ENST00000589201 MAP3K4Q9Y6R4 1608 aa32.26■■■□□ 2.76
LINC00654-202ENST00000589201 PPRC1Q5VV67 1664 aaKnown RBP32.25■■■□□ 2.75
LINC00654-202ENST00000589201 ATP1B4Q9UN42 357 aaPredicted RBP32.21■■■□□ 2.75
LINC00654-202ENST00000589201 CLIP1P30622 1438 aa32.17■■■□□ 2.74
LINC00654-202ENST00000589201 CD109Q6YHK3 1445 aa32.17■■■□□ 2.74
LINC00654-202ENST00000589201 PLEKHD1A6NEE1 506 aa32.16■■■□□ 2.74
LINC00654-202ENST00000589201 KDM6BO15054 1643 aa32.15■■■□□ 2.74
LINC00654-202ENST00000589201 CFAP43Q8NDM7 1665 aa32.14■■■□□ 2.74
LINC00654-202ENST00000589201 CDK13Q14004 1512 aaKnown RBP32.12■■■□□ 2.73
LINC00654-202ENST00000589201 TEX14Q8IWB6 1497 aa32.12■■■□□ 2.73
LINC00654-202ENST00000589201 LOC105371045A0A1W2PR82 267 aa32.12■■■□□ 2.73
LINC00654-202ENST00000589201 HECW1Q76N89 1606 aa32.11■■■□□ 2.73
LINC00654-202ENST00000589201 MAGI3Q5TCQ9 1506 aa32.09■■■□□ 2.73
LINC00654-202ENST00000589201 ABCA9Q8IUA7 1624 aa32.05■■■□□ 2.72
LINC00654-202ENST00000589201 COL17A1Q9UMD9 1497 aaPredicted RBP32.03■■■□□ 2.72
LINC00654-202ENST00000589201 CASKIN1Q8WXD9 1431 aa32.01■■■□□ 2.72
LINC00654-202ENST00000589201 CEP162Q5TB80 1403 aa31.99■■■□□ 2.71
LINC00654-202ENST00000589201 PCF11O94913 1555 aaKnown RBP31.98■■■□□ 2.71
LINC00654-202ENST00000589201 LRRIQ1Q96JM4 1722 aa31.97■■■□□ 2.71
LINC00654-202ENST00000589201 CDK11AQ9UQ88 783 aaPredicted RBP31.97■■■□□ 2.71
LINC00654-202ENST00000589201 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.91■■■□□ 2.7
LINC00654-202ENST00000589201 FYCO1Q9BQS8 1478 aa31.91■■■□□ 2.7
LINC00654-202ENST00000589201 CCDC18Q5T9S5 1454 aa31.87■■■□□ 2.69
LINC00654-202ENST00000589201 TTC37Q6PGP7 1564 aa31.85■■■□□ 2.69
LINC00654-202ENST00000589201 TROQ12816 1431 aaPredicted RBP31.85■■■□□ 2.69
LINC00654-202ENST00000589201 PHLDB1Q86UU1 1377 aa31.83■■■□□ 2.69
LINC00654-202ENST00000589201 NEO1Q92859 1461 aa31.82■■■□□ 2.68
LINC00654-202ENST00000589201 ARAP3Q8WWN8 1544 aa31.81■■■□□ 2.68
LINC00654-202ENST00000589201 KIF14Q15058 1648 aa31.78■■■□□ 2.68
LINC00654-202ENST00000589201 FANCAO15360 1455 aa31.75■■■□□ 2.67
LINC00654-202ENST00000589201 PLCH2O75038 1416 aa31.74■■■□□ 2.67
LINC00654-202ENST00000589201 RAPGEF3O95398 923 aa31.72■■■□□ 2.67
LINC00654-202ENST00000589201 AKNAQ7Z591 1439 aa31.72■■■□□ 2.67
LINC00654-202ENST00000589201 CFAP74Q9C0B2 1584 aa31.67■■■□□ 2.66
LINC00654-202ENST00000589201 MYO5CQ9NQX4 1742 aa31.66■■■□□ 2.66
LINC00654-202ENST00000589201 EFCAB2Q5VUJ9 269 aa31.65■■■□□ 2.66
LINC00654-202ENST00000589201 DENND4BO75064 1496 aaPredicted RBP31.61■■■□□ 2.65
LINC00654-202ENST00000589201 AEBP2Q6ZN18 517 aaPredicted RBP31.61■■■□□ 2.65
LINC00654-202ENST00000589201 VPS8Q8N3P4 1428 aa31.6■■■□□ 2.65
LINC00654-202ENST00000589201 FRMPD1Q5SYB0 1578 aa31.59■■■□□ 2.65
LINC00654-202ENST00000589201 MTUS2Q5JR59 1369 aa31.58■■■□□ 2.65
LINC00654-202ENST00000589201 KDM4FA0A1W2PPD8 638 aa31.58■■■□□ 2.65
LINC00654-202ENST00000589201 ARHGAP5Q13017 1502 aa31.57■■■□□ 2.64
LINC00654-202ENST00000589201 ADGRL1O94910 1474 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms