RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 FAM9AQ8IZU1 332 aaPredicted RBP32.38■■■□□ 2.77
CIRBP-220ENST00000588917 RAPGEF2Q9Y4G8 1499 aa32.31■■■□□ 2.76
CIRBP-220ENST00000588917 PRXQ9BXM0 1461 aa32.27■■■□□ 2.76
CIRBP-220ENST00000588917 NUP160Q12769 1436 aa32.23■■■□□ 2.75
CIRBP-220ENST00000588917 CEP170Q5SW79 1584 aa32.13■■■□□ 2.73
CIRBP-220ENST00000588917 KIAA0586Q9BVV6 1533 aa32.09■■■□□ 2.73
CIRBP-220ENST00000588917 KIF21BO75037 1637 aa32.04■■■□□ 2.72
CIRBP-220ENST00000588917 JPH4Q96JJ6 628 aa32.03■■■□□ 2.72
CIRBP-220ENST00000588917 ERCC6L2Q5T890 1561 aa32.01■■■□□ 2.71
CIRBP-220ENST00000588917 GOLGA3Q08378 1498 aa31.95■■■□□ 2.7
CIRBP-220ENST00000588917 UBTFP17480 764 aaKnown RBP31.94■■■□□ 2.7
CIRBP-220ENST00000588917 SHROOM2Q13796 1616 aa31.91■■■□□ 2.7
CIRBP-220ENST00000588917 IQGAP2Q13576 1575 aa31.9■■■□□ 2.7
CIRBP-220ENST00000588917 EHMT2Q96KQ7 1210 aa31.87■■■□□ 2.69
CIRBP-220ENST00000588917 PRG4Q92954 1404 aaPredicted RBP31.85■■■□□ 2.69
CIRBP-220ENST00000588917 CTTNBP2Q8WZ74 1663 aa31.84■■■□□ 2.69
CIRBP-220ENST00000588917 CARMIL2Q6F5E8 1435 aa31.8■■■□□ 2.68
CIRBP-220ENST00000588917 UGGT2Q9NYU1 1516 aa31.76■■■□□ 2.68
CIRBP-220ENST00000588917 TNIKQ9UKE5 1360 aa31.68■■■□□ 2.66
CIRBP-220ENST00000588917 DISP1Q96F81 1524 aa31.64■■■□□ 2.66
CIRBP-220ENST00000588917 LOC105371045A0A1W2PR82 267 aa31.62■■■□□ 2.65
CIRBP-220ENST00000588917 RANGAP1P46060 587 aaPredicted RBP31.62■■■□□ 2.65
CIRBP-220ENST00000588917 NPM1P06748 294 aaKnown RBP eCLIP31.59■■■□□ 2.65
CIRBP-220ENST00000588917 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
CIRBP-220ENST00000588917 PTPRGP23470 1445 aa31.58■■■□□ 2.65
CIRBP-220ENST00000588917 KIAA0556O60303 1618 aa31.56■■■□□ 2.64
CIRBP-220ENST00000588917 P3H3Q8IVL6 736 aa31.52■■■□□ 2.64
CIRBP-220ENST00000588917 EFCAB5A4FU69 1503 aa31.51■■■□□ 2.63
CIRBP-220ENST00000588917 SAMD9Q5K651 1589 aa31.49■■■□□ 2.63
CIRBP-220ENST00000588917 TTBK1Q5TCY1 1321 aaPredicted RBP31.49■■■□□ 2.63
CIRBP-220ENST00000588917 FAM69CQ0P6D2 419 aa31.47■■■□□ 2.63
CIRBP-220ENST00000588917 KIF13AQ9H1H9 1805 aa31.45■■■□□ 2.62
CIRBP-220ENST00000588917 ABCC10Q5T3U5 1492 aa31.43■■■□□ 2.62
CIRBP-220ENST00000588917 MAPKBP1O60336 1514 aa31.41■■■□□ 2.62
CIRBP-220ENST00000588917 ADCY10Q96PN6 1610 aa31.4■■■□□ 2.62
CIRBP-220ENST00000588917 CLIP1P30622 1438 aa31.4■■■□□ 2.62
CIRBP-220ENST00000588917 ARHGAP35Q9NRY4 1499 aa31.39■■■□□ 2.62
CIRBP-220ENST00000588917 FHOD3Q2V2M9 1422 aa31.35■■■□□ 2.61
CIRBP-220ENST00000588917 UACAQ9BZF9 1416 aa31.35■■■□□ 2.61
CIRBP-220ENST00000588917 CEP162Q5TB80 1403 aa31.33■■■□□ 2.61
CIRBP-220ENST00000588917 FMN1Q68DA7 1419 aa31.29■■■□□ 2.6
CIRBP-220ENST00000588917 UHRF1BP1LA0JNW5 1464 aa31.28■■■□□ 2.6
CIRBP-220ENST00000588917 DIP2BQ9P265 1576 aa31.27■■■□□ 2.6
CIRBP-220ENST00000588917 PLB1Q6P1J6 1458 aa31.23■■■□□ 2.59
CIRBP-220ENST00000588917 ABCC2Q92887 1545 aa31.23■■■□□ 2.59
CIRBP-220ENST00000588917 ABCA8O94911 1581 aa31.2■■■□□ 2.58
CIRBP-220ENST00000588917 RAPGEF6Q8TEU7 1601 aa31.13■■■□□ 2.57
CIRBP-220ENST00000588917 KDM5BQ9UGL1 1544 aa31.11■■■□□ 2.57
CIRBP-220ENST00000588917 ATP1B4Q9UN42 357 aaPredicted RBP31.11■■■□□ 2.57
CIRBP-220ENST00000588917 ASXL2Q76L83 1435 aa31.07■■■□□ 2.56
CIRBP-220ENST00000588917 CASKIN1Q8WXD9 1431 aa31.05■■■□□ 2.56
CIRBP-220ENST00000588917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.04■■■□□ 2.56
CIRBP-220ENST00000588917 HNRNPUL2Q1KMD3 747 aaKnown RBP31.04■■■□□ 2.56
CIRBP-220ENST00000588917 KDM6BO15054 1643 aa31.04■■■□□ 2.56
CIRBP-220ENST00000588917 NUP153P49790 1475 aaKnown RBP31.02■■■□□ 2.56
CIRBP-220ENST00000588917 ATP10BO94823 1461 aa31.01■■■□□ 2.56
CIRBP-220ENST00000588917 TSPOAP1O95153 1857 aa31.01■■■□□ 2.56
CIRBP-220ENST00000588917 HECW1Q76N89 1606 aa30.98■■■□□ 2.55
CIRBP-220ENST00000588917 ARID3CA6NKF2 412 aa30.98■■■□□ 2.55
CIRBP-220ENST00000588917 ZCCHC11Q5TAX3 1644 aaKnown RBP30.97■■■□□ 2.55
CIRBP-220ENST00000588917 FYCO1Q9BQS8 1478 aa30.96■■■□□ 2.55
CIRBP-220ENST00000588917 CDK11AQ9UQ88 783 aaPredicted RBP30.96■■■□□ 2.55
CIRBP-220ENST00000588917 GLI2P10070 1586 aa30.96■■■□□ 2.55
CIRBP-220ENST00000588917 VPS8Q8N3P4 1428 aa30.95■■■□□ 2.54
CIRBP-220ENST00000588917 PLEKHD1A6NEE1 506 aa30.93■■■□□ 2.54
CIRBP-220ENST00000588917 EPRSP07814 1512 aaKnown RBP30.92■■■□□ 2.54
CIRBP-220ENST00000588917 PCF11O94913 1555 aaKnown RBP30.9■■■□□ 2.54
CIRBP-220ENST00000588917 CCDC18Q5T9S5 1454 aa30.89■■■□□ 2.53
CIRBP-220ENST00000588917 KDM4FA0A1W2PPD8 638 aa30.87■■■□□ 2.53
CIRBP-220ENST00000588917 WDR7Q9Y4E6 1490 aa30.84■■■□□ 2.53
CIRBP-220ENST00000588917 KCNH8Q96L42 1107 aa30.81■■■□□ 2.52
CIRBP-220ENST00000588917 PPRC1Q5VV67 1664 aaKnown RBP30.81■■■□□ 2.52
CIRBP-220ENST00000588917 CDK13Q14004 1512 aaKnown RBP30.8■■■□□ 2.52
CIRBP-220ENST00000588917 APLP2Q06481 763 aa30.79■■■□□ 2.52
CIRBP-220ENST00000588917 TEX14Q8IWB6 1497 aa30.74■■■□□ 2.51
CIRBP-220ENST00000588917 MAP3K4Q9Y6R4 1608 aa30.73■■■□□ 2.51
CIRBP-220ENST00000588917 COL17A1Q9UMD9 1497 aaPredicted RBP30.71■■■□□ 2.51
CIRBP-220ENST00000588917 LRRIQ1Q96JM4 1722 aa30.69■■■□□ 2.5
CIRBP-220ENST00000588917 TROQ12816 1431 aaPredicted RBP30.68■■■□□ 2.5
CIRBP-220ENST00000588917 MAP3K1Q13233 1512 aa30.67■■■□□ 2.5
CIRBP-220ENST00000588917 MTUS2Q5JR59 1369 aa30.64■■■□□ 2.5
CIRBP-220ENST00000588917 TIAM1Q13009 1591 aa30.59■■■□□ 2.49
CIRBP-220ENST00000588917 CD109Q6YHK3 1445 aa30.59■■■□□ 2.49
CIRBP-220ENST00000588917 MAGI3Q5TCQ9 1506 aa30.55■■■□□ 2.48
CIRBP-220ENST00000588917 ADGRL1O94910 1474 aa30.55■■■□□ 2.48
CIRBP-220ENST00000588917 CFAP43Q8NDM7 1665 aa30.53■■■□□ 2.48
CIRBP-220ENST00000588917 ABCA9Q8IUA7 1624 aa30.53■■■□□ 2.48
CIRBP-220ENST00000588917 KIF14Q15058 1648 aa30.52■■■□□ 2.48
CIRBP-220ENST00000588917 LRRC9Q6ZRR7 1453 aa30.51■■■□□ 2.48
CIRBP-220ENST00000588917 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.47
CIRBP-220ENST00000588917 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.5■■■□□ 2.47
CIRBP-220ENST00000588917 KANK4Q5T7N3 995 aaPredicted RBP30.48■■■□□ 2.47
CIRBP-220ENST00000588917 PLCH2O75038 1416 aa30.41■■■□□ 2.46
CIRBP-220ENST00000588917 PHLDB1Q86UU1 1377 aa30.4■■■□□ 2.46
CIRBP-220ENST00000588917 EFCAB2Q5VUJ9 269 aa30.39■■■□□ 2.46
CIRBP-220ENST00000588917 CCNB3Q8WWL7 1395 aa30.39■■■□□ 2.45
CIRBP-220ENST00000588917 TTC37Q6PGP7 1564 aa30.38■■■□□ 2.45
CIRBP-220ENST00000588917 SUPT6HQ7KZ85 1726 aaKnown RBP30.36■■■□□ 2.45
CIRBP-220ENST00000588917 ARAP3Q8WWN8 1544 aa30.34■■■□□ 2.45
CIRBP-220ENST00000588917 NCOA2Q15596 1464 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms