RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 KIF13AQ9H1H9 1805 aa26.43■■□□□ 1.82
GCDH-208ENST00000588905 CUL7Q14999 1698 aa26.41■■□□□ 1.82
GCDH-208ENST00000588905 JPH4Q96JJ6 628 aa26.34■■□□□ 1.81
GCDH-208ENST00000588905 CARMIL1Q5VZK9 1371 aa26.33■■□□□ 1.8
GCDH-208ENST00000588905 ADCY10Q96PN6 1610 aa26.29■■□□□ 1.8
GCDH-208ENST00000588905 KIAA0586Q9BVV6 1533 aa26.28■■□□□ 1.8
GCDH-208ENST00000588905 MAPKBP1O60336 1514 aa26.18■■□□□ 1.78
GCDH-208ENST00000588905 DIP2BQ9P265 1576 aa26.16■■□□□ 1.78
GCDH-208ENST00000588905 ABCC10Q5T3U5 1492 aa26.11■■□□□ 1.77
GCDH-208ENST00000588905 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
GCDH-208ENST00000588905 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
GCDH-208ENST00000588905 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
GCDH-208ENST00000588905 DISP1Q96F81 1524 aa25.99■■□□□ 1.75
GCDH-208ENST00000588905 TSPOAP1O95153 1857 aa25.99■■□□□ 1.75
GCDH-208ENST00000588905 PRXQ9BXM0 1461 aa25.97■■□□□ 1.75
GCDH-208ENST00000588905 PTPRGP23470 1445 aa25.97■■□□□ 1.75
GCDH-208ENST00000588905 FAM69CQ0P6D2 419 aa25.95■■□□□ 1.74
GCDH-208ENST00000588905 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.74
GCDH-208ENST00000588905 CARMIL2Q6F5E8 1435 aa25.95■■□□□ 1.74
GCDH-208ENST00000588905 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
GCDH-208ENST00000588905 UGGT2Q9NYU1 1516 aa25.93■■□□□ 1.74
GCDH-208ENST00000588905 CTTNBP2Q8WZ74 1663 aa25.92■■□□□ 1.74
GCDH-208ENST00000588905 ABCC2Q92887 1545 aa25.92■■□□□ 1.74
GCDH-208ENST00000588905 NPM1P06748 294 aaKnown RBP eCLIP25.91■■□□□ 1.74
GCDH-208ENST00000588905 PPRC1Q5VV67 1664 aaKnown RBP25.9■■□□□ 1.74
GCDH-208ENST00000588905 KIAA0556O60303 1618 aa25.9■■□□□ 1.74
GCDH-208ENST00000588905 EEA1Q15075 1411 aa25.88■■□□□ 1.73
GCDH-208ENST00000588905 UHRF1BP1LA0JNW5 1464 aa25.88■■□□□ 1.73
GCDH-208ENST00000588905 KDM6BO15054 1643 aa25.86■■□□□ 1.73
GCDH-208ENST00000588905 TTBK1Q5TCY1 1321 aaPredicted RBP25.85■■□□□ 1.73
GCDH-208ENST00000588905 FAM9AQ8IZU1 332 aaPredicted RBP25.82■■□□□ 1.72
GCDH-208ENST00000588905 ZCCHC11Q5TAX3 1644 aaKnown RBP25.81■■□□□ 1.72
GCDH-208ENST00000588905 ASXL2Q76L83 1435 aa25.81■■□□□ 1.72
GCDH-208ENST00000588905 UACAQ9BZF9 1416 aa25.81■■□□□ 1.72
GCDH-208ENST00000588905 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
GCDH-208ENST00000588905 GLI2P10070 1586 aa25.81■■□□□ 1.72
GCDH-208ENST00000588905 KDM5BQ9UGL1 1544 aa25.78■■□□□ 1.72
GCDH-208ENST00000588905 PLB1Q6P1J6 1458 aa25.75■■□□□ 1.71
GCDH-208ENST00000588905 MAP3K4Q9Y6R4 1608 aa25.74■■□□□ 1.71
GCDH-208ENST00000588905 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
GCDH-208ENST00000588905 EPRSP07814 1512 aaKnown RBP25.68■■□□□ 1.7
GCDH-208ENST00000588905 ABCA8O94911 1581 aa25.66■■□□□ 1.7
GCDH-208ENST00000588905 COL17A1Q9UMD9 1497 aaPredicted RBP25.6■■□□□ 1.69
GCDH-208ENST00000588905 WDR7Q9Y4E6 1490 aa25.57■■□□□ 1.68
GCDH-208ENST00000588905 P3H3Q8IVL6 736 aa25.56■■□□□ 1.68
GCDH-208ENST00000588905 KIF21BO75037 1637 aa25.55■■□□□ 1.68
GCDH-208ENST00000588905 KDM4FA0A1W2PPD8 638 aa25.54■■□□□ 1.68
GCDH-208ENST00000588905 SAMD9Q5K651 1589 aa25.51■■□□□ 1.67
GCDH-208ENST00000588905 CFAP43Q8NDM7 1665 aa25.51■■□□□ 1.67
GCDH-208ENST00000588905 RANGAP1P46060 587 aaPredicted RBP25.49■■□□□ 1.67
GCDH-208ENST00000588905 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
GCDH-208ENST00000588905 UBTFP17480 764 aaKnown RBP25.48■■□□□ 1.67
GCDH-208ENST00000588905 TEX14Q8IWB6 1497 aa25.47■■□□□ 1.67
GCDH-208ENST00000588905 MAGI3Q5TCQ9 1506 aa25.4■■□□□ 1.66
GCDH-208ENST00000588905 ADGRL1O94910 1474 aa25.39■■□□□ 1.65
GCDH-208ENST00000588905 RAPGEF6Q8TEU7 1601 aa25.37■■□□□ 1.65
GCDH-208ENST00000588905 ATP10BO94823 1461 aa25.37■■□□□ 1.65
GCDH-208ENST00000588905 FHOD3Q2V2M9 1422 aa25.36■■□□□ 1.65
GCDH-208ENST00000588905 CD109Q6YHK3 1445 aa25.35■■□□□ 1.65
GCDH-208ENST00000588905 ABCA9Q8IUA7 1624 aa25.33■■□□□ 1.65
GCDH-208ENST00000588905 EFCAB5A4FU69 1503 aa25.32■■□□□ 1.64
GCDH-208ENST00000588905 ARID3CA6NKF2 412 aa25.32■■□□□ 1.64
GCDH-208ENST00000588905 KCNH8Q96L42 1107 aa25.29■■□□□ 1.64
GCDH-208ENST00000588905 NUP153P49790 1475 aaKnown RBP25.26■■□□□ 1.63
GCDH-208ENST00000588905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.23■■□□□ 1.63
GCDH-208ENST00000588905 HNRNPUL2Q1KMD3 747 aaKnown RBP25.23■■□□□ 1.63
GCDH-208ENST00000588905 ARAP3Q8WWN8 1544 aa25.21■■□□□ 1.63
GCDH-208ENST00000588905 ARHGAP35Q9NRY4 1499 aa25.2■■□□□ 1.62
GCDH-208ENST00000588905 FRMPD1Q5SYB0 1578 aa25.17■■□□□ 1.62
GCDH-208ENST00000588905 FMN1Q68DA7 1419 aa25.15■■□□□ 1.62
GCDH-208ENST00000588905 PLEKHD1A6NEE1 506 aa25.13■■□□□ 1.61
GCDH-208ENST00000588905 ATP1B4Q9UN42 357 aaPredicted RBP25.09■■□□□ 1.61
GCDH-208ENST00000588905 HECW2Q9P2P5 1572 aa25.09■■□□□ 1.61
GCDH-208ENST00000588905 NEO1Q92859 1461 aa25.08■■□□□ 1.6
GCDH-208ENST00000588905 TTC37Q6PGP7 1564 aa25.06■■□□□ 1.6
GCDH-208ENST00000588905 RICTORQ6R327 1708 aa25.06■■□□□ 1.6
GCDH-208ENST00000588905 CDK13Q14004 1512 aaKnown RBP25.04■■□□□ 1.6
GCDH-208ENST00000588905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.04■■□□□ 1.6
GCDH-208ENST00000588905 ADAMTSL3P82987 1691 aa25.03■■□□□ 1.6
GCDH-208ENST00000588905 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
GCDH-208ENST00000588905 PHLDB1Q86UU1 1377 aa25.01■■□□□ 1.59
GCDH-208ENST00000588905 CLIP1P30622 1438 aa25■■□□□ 1.59
GCDH-208ENST00000588905 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
GCDH-208ENST00000588905 RAPGEF3O95398 923 aa24.98■■□□□ 1.59
GCDH-208ENST00000588905 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
GCDH-208ENST00000588905 HECW1Q76N89 1606 aa24.97■■□□□ 1.59
GCDH-208ENST00000588905 BCORL1Q5H9F3 1711 aa24.97■■□□□ 1.59
GCDH-208ENST00000588905 ARHGEF40Q8TER5 1519 aa24.96■■□□□ 1.59
GCDH-208ENST00000588905 CFAP74Q9C0B2 1584 aa24.96■■□□□ 1.59
GCDH-208ENST00000588905 SIGLEC1Q9BZZ2 1709 aa24.95■■□□□ 1.59
GCDH-208ENST00000588905 CASKIN1Q8WXD9 1431 aa24.93■■□□□ 1.58
GCDH-208ENST00000588905 FANCAO15360 1455 aa24.91■■□□□ 1.58
GCDH-208ENST00000588905 MADDQ8WXG6 1647 aa24.9■■□□□ 1.58
GCDH-208ENST00000588905 ZMYM4Q5VZL5 1548 aa24.89■■□□□ 1.57
GCDH-208ENST00000588905 AKNAQ7Z591 1439 aa24.88■■□□□ 1.57
GCDH-208ENST00000588905 KIF14Q15058 1648 aa24.87■■□□□ 1.57
GCDH-208ENST00000588905 DENND4BO75064 1496 aaPredicted RBP24.87■■□□□ 1.57
GCDH-208ENST00000588905 MYO5CQ9NQX4 1742 aa24.86■■□□□ 1.57
GCDH-208ENST00000588905 PTPRMP28827 1452 aa24.85■■□□□ 1.57
GCDH-208ENST00000588905 TROQ12816 1431 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 233.4 ms