RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 KIAA0586Q9BVV6 1533 aa17.96■□□□□ 0.47
TPM4-209ENST00000588483 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
TPM4-209ENST00000588483 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
TPM4-209ENST00000588483 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
TPM4-209ENST00000588483 IQGAP2Q13576 1575 aa17.83■□□□□ 0.44
TPM4-209ENST00000588483 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
TPM4-209ENST00000588483 EEA1Q15075 1411 aa17.77■□□□□ 0.44
TPM4-209ENST00000588483 UGGT2Q9NYU1 1516 aa17.76■□□□□ 0.43
TPM4-209ENST00000588483 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
TPM4-209ENST00000588483 CARMIL2Q6F5E8 1435 aa17.73■□□□□ 0.43
TPM4-209ENST00000588483 DISP1Q96F81 1524 aa17.72■□□□□ 0.43
TPM4-209ENST00000588483 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
TPM4-209ENST00000588483 TNIKQ9UKE5 1360 aa17.69■□□□□ 0.42
TPM4-209ENST00000588483 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
TPM4-209ENST00000588483 PTPRGP23470 1445 aa17.67■□□□□ 0.42
TPM4-209ENST00000588483 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
TPM4-209ENST00000588483 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
TPM4-209ENST00000588483 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
TPM4-209ENST00000588483 MAPKBP1O60336 1514 aa17.65■□□□□ 0.42
TPM4-209ENST00000588483 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
TPM4-209ENST00000588483 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
TPM4-209ENST00000588483 KIF21BO75037 1637 aa17.6■□□□□ 0.41
TPM4-209ENST00000588483 ABCC2Q92887 1545 aa17.58■□□□□ 0.41
TPM4-209ENST00000588483 KIF13AQ9H1H9 1805 aa17.58■□□□□ 0.4
TPM4-209ENST00000588483 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
TPM4-209ENST00000588483 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
TPM4-209ENST00000588483 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
TPM4-209ENST00000588483 SAMD9Q5K651 1589 aa17.53■□□□□ 0.4
TPM4-209ENST00000588483 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
TPM4-209ENST00000588483 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.4
TPM4-209ENST00000588483 ABCA8O94911 1581 aa17.49■□□□□ 0.39
TPM4-209ENST00000588483 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
TPM4-209ENST00000588483 PLB1Q6P1J6 1458 aa17.47■□□□□ 0.39
TPM4-209ENST00000588483 ZCCHC11Q5TAX3 1644 aaKnown RBP17.46■□□□□ 0.39
TPM4-209ENST00000588483 TTBK1Q5TCY1 1321 aaPredicted RBP17.46■□□□□ 0.38
TPM4-209ENST00000588483 ASXL2Q76L83 1435 aa17.45■□□□□ 0.38
TPM4-209ENST00000588483 FAM69CQ0P6D2 419 aa17.43■□□□□ 0.38
TPM4-209ENST00000588483 GLI2P10070 1586 aa17.43■□□□□ 0.38
TPM4-209ENST00000588483 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
TPM4-209ENST00000588483 EPRSP07814 1512 aaKnown RBP17.37■□□□□ 0.37
TPM4-209ENST00000588483 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
TPM4-209ENST00000588483 RAPGEF6Q8TEU7 1601 aa17.35■□□□□ 0.37
TPM4-209ENST00000588483 FHOD3Q2V2M9 1422 aa17.33■□□□□ 0.36
TPM4-209ENST00000588483 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
TPM4-209ENST00000588483 PPRC1Q5VV67 1664 aaKnown RBP17.32■□□□□ 0.36
TPM4-209ENST00000588483 MAP3K4Q9Y6R4 1608 aa17.32■□□□□ 0.36
TPM4-209ENST00000588483 ATP10BO94823 1461 aa17.31■□□□□ 0.36
TPM4-209ENST00000588483 TSPOAP1O95153 1857 aa17.3■□□□□ 0.36
TPM4-209ENST00000588483 NUP153P49790 1475 aaKnown RBP17.3■□□□□ 0.36
TPM4-209ENST00000588483 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
TPM4-209ENST00000588483 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
TPM4-209ENST00000588483 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
TPM4-209ENST00000588483 KDM6BO15054 1643 aa17.24■□□□□ 0.35
TPM4-209ENST00000588483 TEX14Q8IWB6 1497 aa17.24■□□□□ 0.35
TPM4-209ENST00000588483 FMN1Q68DA7 1419 aa17.23■□□□□ 0.35
TPM4-209ENST00000588483 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
TPM4-209ENST00000588483 MAGI3Q5TCQ9 1506 aa17.22■□□□□ 0.35
TPM4-209ENST00000588483 ABCA9Q8IUA7 1624 aa17.2■□□□□ 0.34
TPM4-209ENST00000588483 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
TPM4-209ENST00000588483 CD109Q6YHK3 1445 aa17.18■□□□□ 0.34
TPM4-209ENST00000588483 HECW1Q76N89 1606 aa17.17■□□□□ 0.34
TPM4-209ENST00000588483 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
TPM4-209ENST00000588483 COL17A1Q9UMD9 1497 aaPredicted RBP17.14■□□□□ 0.33
TPM4-209ENST00000588483 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
TPM4-209ENST00000588483 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
TPM4-209ENST00000588483 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
TPM4-209ENST00000588483 CLIP1P30622 1438 aa17.1■□□□□ 0.33
TPM4-209ENST00000588483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
TPM4-209ENST00000588483 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
TPM4-209ENST00000588483 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
TPM4-209ENST00000588483 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
TPM4-209ENST00000588483 ARAP3Q8WWN8 1544 aa17.08■□□□□ 0.32
TPM4-209ENST00000588483 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
TPM4-209ENST00000588483 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
TPM4-209ENST00000588483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.32
TPM4-209ENST00000588483 NEO1Q92859 1461 aa17.06■□□□□ 0.32
TPM4-209ENST00000588483 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
TPM4-209ENST00000588483 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
TPM4-209ENST00000588483 TTC37Q6PGP7 1564 aa17.03■□□□□ 0.32
TPM4-209ENST00000588483 CDK11AQ9UQ88 783 aaPredicted RBP17.02■□□□□ 0.32
TPM4-209ENST00000588483 TROQ12816 1431 aaPredicted RBP17.01■□□□□ 0.31
TPM4-209ENST00000588483 CFAP74Q9C0B2 1584 aa17■□□□□ 0.31
TPM4-209ENST00000588483 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
TPM4-209ENST00000588483 KIF14Q15058 1648 aa16.98■□□□□ 0.31
TPM4-209ENST00000588483 PLCH2O75038 1416 aa16.96■□□□□ 0.31
TPM4-209ENST00000588483 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
TPM4-209ENST00000588483 FANCAO15360 1455 aa16.96■□□□□ 0.31
TPM4-209ENST00000588483 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
TPM4-209ENST00000588483 MYO5CQ9NQX4 1742 aa16.94■□□□□ 0.3
TPM4-209ENST00000588483 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
TPM4-209ENST00000588483 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
TPM4-209ENST00000588483 DENND4BO75064 1496 aaPredicted RBP16.9■□□□□ 0.3
TPM4-209ENST00000588483 KDM4FA0A1W2PPD8 638 aa16.89■□□□□ 0.29
TPM4-209ENST00000588483 ZMYM4Q5VZL5 1548 aa16.89■□□□□ 0.29
TPM4-209ENST00000588483 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
TPM4-209ENST00000588483 PREX2Q70Z35 1606 aa16.87■□□□□ 0.29
TPM4-209ENST00000588483 ADGRL1O94910 1474 aa16.86■□□□□ 0.29
TPM4-209ENST00000588483 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
TPM4-209ENST00000588483 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
TPM4-209ENST00000588483 CDC42BPBQ9Y5S2 1711 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms