RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 KIAA0586Q9BVV6 1533 aa35.92■■■■□ 3.34
NCLN-204ENST00000588428 JPH4Q96JJ6 628 aa35.89■■■■□ 3.34
NCLN-204ENST00000588428 PRG4Q92954 1404 aaPredicted RBP35.88■■■■□ 3.33
NCLN-204ENST00000588428 RAPGEF2Q9Y4G8 1499 aa35.74■■■■□ 3.31
NCLN-204ENST00000588428 IQGAP2Q13576 1575 aa35.68■■■■□ 3.3
NCLN-204ENST00000588428 TRHP20396 242 aaPredicted RBP35.59■■■■□ 3.29
NCLN-204ENST00000588428 PRXQ9BXM0 1461 aa35.56■■■■□ 3.28
NCLN-204ENST00000588428 CTTNBP2Q8WZ74 1663 aa35.52■■■■□ 3.28
NCLN-204ENST00000588428 CARMIL2Q6F5E8 1435 aa35.51■■■■□ 3.28
NCLN-204ENST00000588428 UGGT2Q9NYU1 1516 aa35.49■■■■□ 3.27
NCLN-204ENST00000588428 ADCY10Q96PN6 1610 aa35.46■■■■□ 3.27
NCLN-204ENST00000588428 DISP1Q96F81 1524 aa35.43■■■■□ 3.26
NCLN-204ENST00000588428 EEA1Q15075 1411 aa35.43■■■■□ 3.26
NCLN-204ENST00000588428 TNIKQ9UKE5 1360 aa35.42■■■■□ 3.26
NCLN-204ENST00000588428 PTPRGP23470 1445 aa35.4■■■■□ 3.26
NCLN-204ENST00000588428 KIAA0556O60303 1618 aa35.35■■■■□ 3.25
NCLN-204ENST00000588428 MAPKBP1O60336 1514 aa35.35■■■■□ 3.25
NCLN-204ENST00000588428 CSRNP3Q8WYN3 585 aa35.33■■■■□ 3.25
NCLN-204ENST00000588428 KIF13AQ9H1H9 1805 aa35.31■■■■□ 3.24
NCLN-204ENST00000588428 NPM1P06748 294 aaKnown RBP eCLIP35.27■■■■□ 3.24
NCLN-204ENST00000588428 UHRF1BP1LA0JNW5 1464 aa35.25■■■■□ 3.23
NCLN-204ENST00000588428 GOLGA3Q08378 1498 aa35.23■■■■□ 3.23
NCLN-204ENST00000588428 CHIC1Q5VXU3 224 aa35.2■■■■□ 3.23
NCLN-204ENST00000588428 ABCC2Q92887 1545 aa35.2■■■■□ 3.23
NCLN-204ENST00000588428 UACAQ9BZF9 1416 aa35.19■■■■□ 3.22
NCLN-204ENST00000588428 ABCC10Q5T3U5 1492 aa35.18■■■■□ 3.22
NCLN-204ENST00000588428 DIP2BQ9P265 1576 aa35.15■■■■□ 3.22
NCLN-204ENST00000588428 KIF21BO75037 1637 aa35.12■■■■□ 3.21
NCLN-204ENST00000588428 TTBK1Q5TCY1 1321 aaPredicted RBP35.1■■■■□ 3.21
NCLN-204ENST00000588428 KDM5BQ9UGL1 1544 aa35.06■■■■□ 3.2
NCLN-204ENST00000588428 SAMD9Q5K651 1589 aa35.03■■■■□ 3.2
NCLN-204ENST00000588428 FAM69CQ0P6D2 419 aa35■■■■□ 3.19
NCLN-204ENST00000588428 ABCA8O94911 1581 aa35■■■■□ 3.19
NCLN-204ENST00000588428 PLB1Q6P1J6 1458 aa34.99■■■■□ 3.19
NCLN-204ENST00000588428 ZCCHC11Q5TAX3 1644 aaKnown RBP34.99■■■■□ 3.19
NCLN-204ENST00000588428 FAM9AQ8IZU1 332 aaPredicted RBP34.98■■■■□ 3.19
NCLN-204ENST00000588428 ASXL2Q76L83 1435 aa34.97■■■■□ 3.19
NCLN-204ENST00000588428 GLI2P10070 1586 aa34.91■■■■□ 3.18
NCLN-204ENST00000588428 TSPOAP1O95153 1857 aa34.82■■■■□ 3.17
NCLN-204ENST00000588428 EFCAB5A4FU69 1503 aa34.8■■■■□ 3.16
NCLN-204ENST00000588428 EPRSP07814 1512 aaKnown RBP34.8■■■■□ 3.16
NCLN-204ENST00000588428 WDR7Q9Y4E6 1490 aa34.77■■■■□ 3.16
NCLN-204ENST00000588428 P3H3Q8IVL6 736 aa34.76■■■■□ 3.16
NCLN-204ENST00000588428 PPRC1Q5VV67 1664 aaKnown RBP34.74■■■■□ 3.15
NCLN-204ENST00000588428 MAP3K4Q9Y6R4 1608 aa34.73■■■■□ 3.15
NCLN-204ENST00000588428 RAPGEF6Q8TEU7 1601 aa34.73■■■■□ 3.15
NCLN-204ENST00000588428 FHOD3Q2V2M9 1422 aa34.67■■■■□ 3.14
NCLN-204ENST00000588428 ATP10BO94823 1461 aa34.65■■■■□ 3.14
NCLN-204ENST00000588428 KDM6BO15054 1643 aa34.64■■■■□ 3.14
NCLN-204ENST00000588428 UBTFP17480 764 aaKnown RBP34.61■■■■□ 3.13
NCLN-204ENST00000588428 CFAP43Q8NDM7 1665 aa34.6■■■■□ 3.13
NCLN-204ENST00000588428 RANGAP1P46060 587 aaPredicted RBP34.58■■■■□ 3.13
NCLN-204ENST00000588428 NUP153P49790 1475 aaKnown RBP34.57■■■■□ 3.12
NCLN-204ENST00000588428 TEX14Q8IWB6 1497 aa34.55■■■■□ 3.12
NCLN-204ENST00000588428 ARHGAP35Q9NRY4 1499 aa34.49■■■■□ 3.11
NCLN-204ENST00000588428 MAGI3Q5TCQ9 1506 aa34.48■■■■□ 3.11
NCLN-204ENST00000588428 EHMT2Q96KQ7 1210 aa34.47■■■■□ 3.11
NCLN-204ENST00000588428 CD109Q6YHK3 1445 aa34.44■■■■□ 3.1
NCLN-204ENST00000588428 ARID3CA6NKF2 412 aa34.43■■■■□ 3.1
NCLN-204ENST00000588428 KCNH8Q96L42 1107 aa34.43■■■■□ 3.1
NCLN-204ENST00000588428 ABCA9Q8IUA7 1624 aa34.43■■■■□ 3.1
NCLN-204ENST00000588428 FMN1Q68DA7 1419 aa34.42■■■■□ 3.1
NCLN-204ENST00000588428 COL17A1Q9UMD9 1497 aaPredicted RBP34.34■■■■□ 3.09
NCLN-204ENST00000588428 HECW1Q76N89 1606 aa34.33■■■■□ 3.09
NCLN-204ENST00000588428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.31■■■■□ 3.08
NCLN-204ENST00000588428 HNRNPUL2Q1KMD3 747 aaKnown RBP34.31■■■■□ 3.08
NCLN-204ENST00000588428 PLEKHD1A6NEE1 506 aa34.25■■■■□ 3.07
NCLN-204ENST00000588428 CDK13Q14004 1512 aaKnown RBP34.25■■■■□ 3.07
NCLN-204ENST00000588428 PHLDB1Q86UU1 1377 aa34.2■■■■□ 3.07
NCLN-204ENST00000588428 ARAP3Q8WWN8 1544 aa34.2■■■■□ 3.06
NCLN-204ENST00000588428 LRRIQ1Q96JM4 1722 aa34.16■■■■□ 3.06
NCLN-204ENST00000588428 NEO1Q92859 1461 aa34.16■■■■□ 3.06
NCLN-204ENST00000588428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.15■■■■□ 3.062e-6■□□□□ 8.3
NCLN-204ENST00000588428 CLIP1P30622 1438 aa34.13■■■■□ 3.05
NCLN-204ENST00000588428 CASKIN1Q8WXD9 1431 aa34.12■■■■□ 3.05
NCLN-204ENST00000588428 PCF11O94913 1555 aaKnown RBP34.11■■■■□ 3.05
NCLN-204ENST00000588428 TTC37Q6PGP7 1564 aa34.11■■■■□ 3.05
NCLN-204ENST00000588428 AEBP2Q6ZN18 517 aaPredicted RBP34.07■■■■□ 3.04
NCLN-204ENST00000588428 CFAP74Q9C0B2 1584 aa34.06■■■■□ 3.04
NCLN-204ENST00000588428 CDK11AQ9UQ88 783 aaPredicted RBP34.05■■■■□ 3.04
NCLN-204ENST00000588428 CCDC18Q5T9S5 1454 aa34.04■■■■□ 3.04
NCLN-204ENST00000588428 FYCO1Q9BQS8 1478 aa34.04■■■■□ 3.04
NCLN-204ENST00000588428 ATP1B4Q9UN42 357 aaPredicted RBP34.04■■■■□ 3.04
NCLN-204ENST00000588428 TROQ12816 1431 aaPredicted RBP34.01■■■■□ 3.03
NCLN-204ENST00000588428 KIF14Q15058 1648 aa33.98■■■■□ 3.03
NCLN-204ENST00000588428 MYO5CQ9NQX4 1742 aa33.96■■■■□ 3.03
NCLN-204ENST00000588428 FANCAO15360 1455 aa33.96■■■■□ 3.03
NCLN-204ENST00000588428 FRMPD1Q5SYB0 1578 aa33.94■■■■□ 3.02
NCLN-204ENST00000588428 KDM4FA0A1W2PPD8 638 aa33.93■■■■□ 3.02
NCLN-204ENST00000588428 PLCH2O75038 1416 aa33.93■■■■□ 3.02
NCLN-204ENST00000588428 AKNAQ7Z591 1439 aa33.92■■■■□ 3.02
NCLN-204ENST00000588428 RICTORQ6R327 1708 aa33.9■■■■□ 3.02
NCLN-204ENST00000588428 CEP162Q5TB80 1403 aa33.9■■■■□ 3.02
NCLN-204ENST00000588428 ADGRL1O94910 1474 aa33.87■■■■□ 3.01
NCLN-204ENST00000588428 DENND4BO75064 1496 aaPredicted RBP33.86■■■■□ 3.01
NCLN-204ENST00000588428 RAPGEF3O95398 923 aa33.84■■■■□ 3.01
NCLN-204ENST00000588428 ZMYM4Q5VZL5 1548 aa33.79■■■■□ 3
NCLN-204ENST00000588428 CDC42BPBQ9Y5S2 1711 aa33.76■■■■□ 3
NCLN-204ENST00000588428 PREX2Q70Z35 1606 aa33.75■■■□□ 2.99
NCLN-204ENST00000588428 ARHGEF40Q8TER5 1519 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms