RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 NISCHQ9Y2I1 1504 aa51.81■■■■■ 5.88
NCLN-204ENST00000588428 CCDC180Q9P1Z9 1646 aa46.34■■■■■ 5.01
NCLN-204ENST00000588428 ABCC9O60706 1549 aa45.44■■■■■ 4.86
NCLN-204ENST00000588428 RB1CC1Q8TDY2 1594 aa43.7■■■■■ 4.59
NCLN-204ENST00000588428 NACADO15069 1562 aa43.59■■■■■ 4.57
NCLN-204ENST00000588428 MYO15BQ96JP2 1530 aa43.29■■■■■ 4.52
NCLN-204ENST00000588428 DCAF8L2P0C7V8 631 aa43.15■■■■■ 4.5
NCLN-204ENST00000588428 ZCCHC6Q5VYS8 1495 aaKnown RBP43.12■■■■■ 4.49
NCLN-204ENST00000588428 DCAF1Q9Y4B6 1507 aa42.96■■■■■ 4.47
NCLN-204ENST00000588428 UNC13AQ9UPW8 1703 aa42.77■■■■■ 4.44
NCLN-204ENST00000588428 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
NCLN-204ENST00000588428 PABPN1Q86U42 306 aaKnown RBP eCLIP42.32■■■■■ 4.37
NCLN-204ENST00000588428 SCRIBQ14160 1630 aa42.09■■■■■ 4.33
NCLN-204ENST00000588428 SHROOM4Q9ULL8 1493 aa42.02■■■■■ 4.32
NCLN-204ENST00000588428 DNAJC5BQ9UF47 199 aa41.98■■■■■ 4.31
NCLN-204ENST00000588428 EIF4G1Q04637 1599 aaKnown RBP41.28■■■■■ 4.2
NCLN-204ENST00000588428 CC2D2AQ9P2K1 1620 aa41.18■■■■■ 4.18
NCLN-204ENST00000588428 CECR2Q9BXF3 1484 aa40.92■■■■■ 4.14
NCLN-204ENST00000588428 SMARCA4P51532 1647 aa40.3■■■■■ 4.04
NCLN-204ENST00000588428 BAZ1AQ9NRL2 1556 aaPredicted RBP40.21■■■■■ 4.03
NCLN-204ENST00000588428 NCAPD3P42695 1498 aa40.19■■■■■ 4.02
NCLN-204ENST00000588428 ATAD2BQ9ULI0 1458 aa40.13■■■■■ 4.02
NCLN-204ENST00000588428 SMARCA2P51531 1590 aa40.11■■■■■ 4.01
NCLN-204ENST00000588428 HMGXB3Q12766 1538 aa40.01■■■■□ 3.99
NCLN-204ENST00000588428 PEG3Q9GZU2 1588 aa39.98■■■■□ 3.99
NCLN-204ENST00000588428 MROH2BQ7Z745 1585 aa39.88■■■■□ 3.97
NCLN-204ENST00000588428 BAZ1BQ9UIG0 1483 aaKnown RBP39.76■■■■□ 3.96
NCLN-204ENST00000588428 WIZO95785 1651 aa39.45■■■■□ 3.91
NCLN-204ENST00000588428 RSF1Q96T23 1441 aaPredicted RBP39.3■■■■□ 3.88
NCLN-204ENST00000588428 NESP48681 1621 aa39.24■■■■□ 3.87
NCLN-204ENST00000588428 LAMC3Q9Y6N6 1575 aa39.21■■■■□ 3.87
NCLN-204ENST00000588428 ERCC6Q03468 1493 aa39.21■■■■□ 3.87
NCLN-204ENST00000588428 TOP2AP11388 1531 aaKnown RBP39.05■■■■□ 3.84
NCLN-204ENST00000588428 CUX2O14529 1486 aa39.03■■■■□ 3.84
NCLN-204ENST00000588428 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
NCLN-204ENST00000588428 PDS5BQ9NTI5 1447 aa38.89■■■■□ 3.82
NCLN-204ENST00000588428 KIF21AQ7Z4S6 1674 aa38.87■■■■□ 3.81
NCLN-204ENST00000588428 THOC2Q8NI27 1593 aaKnown RBP38.84■■■■□ 3.81
NCLN-204ENST00000588428 CFTRP13569 1480 aa38.69■■■■□ 3.78
NCLN-204ENST00000588428 CCDC88BA6NC98 1476 aa38.53■■■■□ 3.76
NCLN-204ENST00000588428 MRC2Q9UBG0 1479 aa38.53■■■■□ 3.76
NCLN-204ENST00000588428 PRDM2Q13029 1718 aa38.51■■■■□ 3.76
NCLN-204ENST00000588428 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
NCLN-204ENST00000588428 CEP164Q9UPV0 1460 aa38.5■■■■□ 3.75
NCLN-204ENST00000588428 WDR62O43379 1518 aa38.47■■■■□ 3.75
NCLN-204ENST00000588428 URB2Q14146 1524 aaKnown RBP38.15■■■■□ 3.7
NCLN-204ENST00000588428 DNAJC5Q9H3Z4 198 aa38.14■■■■□ 3.7
NCLN-204ENST00000588428 ABCC8Q09428 1581 aa37.89■■■■□ 3.66
NCLN-204ENST00000588428 TOPBP1Q92547 1522 aa37.87■■■■□ 3.65
NCLN-204ENST00000588428 SUPT5HO00267 1087 aaKnown RBP37.85■■■■□ 3.65
NCLN-204ENST00000588428 DNMBPQ6XZF7 1577 aa37.83■■■■□ 3.65
NCLN-204ENST00000588428 IFT140Q96RY7 1462 aa37.72■■■■□ 3.63
NCLN-204ENST00000588428 ZNF608Q9ULD9 1512 aaPredicted RBP37.53■■■■□ 3.6
NCLN-204ENST00000588428 TARBP1Q13395 1621 aaKnown RBP37.53■■■■□ 3.6
NCLN-204ENST00000588428 POLA1P09884 1462 aaPredicted RBP37.52■■■■□ 3.6
NCLN-204ENST00000588428 CUX1P39880 1505 aa37.46■■■■□ 3.59
NCLN-204ENST00000588428 EIF4G3O43432 1585 aaKnown RBP37.44■■■■□ 3.58
NCLN-204ENST00000588428 FGD5Q6ZNL6 1462 aa37.36■■■■□ 3.57
NCLN-204ENST00000588428 SOGA1O94964 1423 aa37.3■■■■□ 3.56
NCLN-204ENST00000588428 WDR97A6NE52 1622 aa37.3■■■■□ 3.56
NCLN-204ENST00000588428 RAD54L2Q9Y4B4 1467 aa37.3■■■■□ 3.56
NCLN-204ENST00000588428 AQRO60306 1485 aaKnown RBP eCLIP37.24■■■■□ 3.555e-7■■■■■ 27.7
NCLN-204ENST00000588428 OSCARQ8IYS5 282 aa37.23■■■■□ 3.55
NCLN-204ENST00000588428 BIVM-ERCC5R4GMW8 1640 aa37.11■■■■□ 3.53
NCLN-204ENST00000588428 TDRD9Q8NDG6 1382 aaKnown RBP37.1■■■■□ 3.53
NCLN-204ENST00000588428 TOP2BQ02880 1626 aa37.08■■■■□ 3.53
NCLN-204ENST00000588428 WRNQ14191 1432 aaPredicted RBP eCLIP37.06■■■■□ 3.52
NCLN-204ENST00000588428 CHD1O14646 1710 aa37.05■■■■□ 3.52
NCLN-204ENST00000588428 ABCA10Q8WWZ4 1543 aa37.04■■■■□ 3.52
NCLN-204ENST00000588428 SYNJ1O43426 1573 aa37.01■■■■□ 3.52
NCLN-204ENST00000588428 GRIN2BQ13224 1484 aa36.97■■■■□ 3.51
NCLN-204ENST00000588428 ABCA5Q8WWZ7 1642 aa36.95■■■■□ 3.51
NCLN-204ENST00000588428 MAGI1Q96QZ7 1491 aaPredicted RBP36.94■■■■□ 3.5
NCLN-204ENST00000588428 SNAPC4Q5SXM2 1469 aa36.94■■■■□ 3.5
NCLN-204ENST00000588428 PBRM1Q86U86 1689 aa36.93■■■■□ 3.5
NCLN-204ENST00000588428 GAPVD1Q14C86 1478 aa36.91■■■■□ 3.5
NCLN-204ENST00000588428 SYNJ2O15056 1496 aa36.78■■■■□ 3.48
NCLN-204ENST00000588428 RIMBP3CA6NJZ7 1639 aa36.76■■■■□ 3.48
NCLN-204ENST00000588428 RIMBP3BA6NNM3 1639 aa36.76■■■■□ 3.48
NCLN-204ENST00000588428 RIMBP3Q9UFD9 1639 aa36.76■■■■□ 3.48
NCLN-204ENST00000588428 FBLN2P98095 1184 aa36.75■■■■□ 3.47
NCLN-204ENST00000588428 ARHGEF11O15085 1522 aa36.7■■■■□ 3.47
NCLN-204ENST00000588428 CHMP7Q8WUX9 453 aaPredicted RBP36.68■■■■□ 3.46
NCLN-204ENST00000588428 CLASP1Q7Z460 1538 aa36.65■■■■□ 3.46
NCLN-204ENST00000588428 ERICH3Q5RHP9 1530 aa36.61■■■■□ 3.45
NCLN-204ENST00000588428 ADAMTS12P58397 1594 aa36.6■■■■□ 3.45
NCLN-204ENST00000588428 TRIM41Q8WV44 630 aa36.59■■■■□ 3.45
NCLN-204ENST00000588428 GRIN2AQ12879 1464 aa36.5■■■■□ 3.43
NCLN-204ENST00000588428 FHAD1B1AJZ9 1412 aa36.49■■■■□ 3.43
NCLN-204ENST00000588428 ARAP1Q96P48 1450 aa36.38■■■■□ 3.41
NCLN-204ENST00000588428 NUP160Q12769 1436 aa36.38■■■■□ 3.41
NCLN-204ENST00000588428 CEP170Q5SW79 1584 aa36.33■■■■□ 3.41
NCLN-204ENST00000588428 KIF27Q86VH2 1401 aa36.32■■■■□ 3.4
NCLN-204ENST00000588428 CYB5RLQ6IPT4 315 aa36.24■■■■□ 3.39
NCLN-204ENST00000588428 CUL7Q14999 1698 aa36.23■■■■□ 3.39
NCLN-204ENST00000588428 SHROOM2Q13796 1616 aa36.19■■■■□ 3.38
NCLN-204ENST00000588428 IGF1RP08069 1367 aa36.19■■■■□ 3.38
NCLN-204ENST00000588428 RUSC2Q8N2Y8 1516 aa36.07■■■■□ 3.36
NCLN-204ENST00000588428 ERCC6L2Q5T890 1561 aa36.03■■■■□ 3.36
NCLN-204ENST00000588428 CARMIL1Q5VZK9 1371 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms