RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 JPH4Q96JJ6 628 aa24■■□□□ 1.43
HDAC5-208ENST00000588419 KIF27Q86VH2 1401 aa23.99■■□□□ 1.43
HDAC5-208ENST00000588419 IGF1RP08069 1367 aa23.9■■□□□ 1.42
HDAC5-208ENST00000588419 ADCY10Q96PN6 1610 aa23.88■■□□□ 1.41
HDAC5-208ENST00000588419 KIAA0586Q9BVV6 1533 aa23.88■■□□□ 1.41
HDAC5-208ENST00000588419 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
HDAC5-208ENST00000588419 NPM1P06748 294 aaKnown RBP eCLIP23.81■■□□□ 1.4
HDAC5-208ENST00000588419 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
HDAC5-208ENST00000588419 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
HDAC5-208ENST00000588419 TSPOAP1O95153 1857 aa23.79■■□□□ 1.4
HDAC5-208ENST00000588419 DIP2BQ9P265 1576 aa23.78■■□□□ 1.4
HDAC5-208ENST00000588419 MAPKBP1O60336 1514 aa23.78■■□□□ 1.4
HDAC5-208ENST00000588419 IQGAP2Q13576 1575 aa23.76■■□□□ 1.39
HDAC5-208ENST00000588419 ABCC10Q5T3U5 1492 aa23.75■■□□□ 1.39
HDAC5-208ENST00000588419 FAM69CQ0P6D2 419 aa23.74■■□□□ 1.39
HDAC5-208ENST00000588419 CARMIL2Q6F5E8 1435 aa23.68■■□□□ 1.38
HDAC5-208ENST00000588419 PTPRGP23470 1445 aa23.67■■□□□ 1.38
HDAC5-208ENST00000588419 TNIKQ9UKE5 1360 aa23.64■■□□□ 1.37
HDAC5-208ENST00000588419 KDM6BO15054 1643 aa23.62■■□□□ 1.37
HDAC5-208ENST00000588419 RAPGEF2Q9Y4G8 1499 aa23.62■■□□□ 1.37
HDAC5-208ENST00000588419 CTTNBP2Q8WZ74 1663 aa23.61■■□□□ 1.37
HDAC5-208ENST00000588419 ABCC2Q92887 1545 aa23.57■■□□□ 1.36
HDAC5-208ENST00000588419 DISP1Q96F81 1524 aa23.57■■□□□ 1.36
HDAC5-208ENST00000588419 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
HDAC5-208ENST00000588419 UGGT2Q9NYU1 1516 aa23.53■■□□□ 1.36
HDAC5-208ENST00000588419 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
HDAC5-208ENST00000588419 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
HDAC5-208ENST00000588419 ZCCHC11Q5TAX3 1644 aaKnown RBP23.5■■□□□ 1.35
HDAC5-208ENST00000588419 UHRF1BP1LA0JNW5 1464 aa23.49■■□□□ 1.35
HDAC5-208ENST00000588419 PPRC1Q5VV67 1664 aaKnown RBP23.48■■□□□ 1.35
HDAC5-208ENST00000588419 PLB1Q6P1J6 1458 aa23.47■■□□□ 1.35
HDAC5-208ENST00000588419 GLI2P10070 1586 aa23.43■■□□□ 1.34
HDAC5-208ENST00000588419 KDM5BQ9UGL1 1544 aa23.39■■□□□ 1.34
HDAC5-208ENST00000588419 MAP3K4Q9Y6R4 1608 aa23.38■■□□□ 1.33
HDAC5-208ENST00000588419 EPRSP07814 1512 aaKnown RBP23.36■■□□□ 1.33
HDAC5-208ENST00000588419 GOLGA3Q08378 1498 aa23.35■■□□□ 1.33
HDAC5-208ENST00000588419 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
HDAC5-208ENST00000588419 WDR7Q9Y4E6 1490 aa23.29■■□□□ 1.32
HDAC5-208ENST00000588419 ABCA8O94911 1581 aa23.28■■□□□ 1.32
HDAC5-208ENST00000588419 TEX14Q8IWB6 1497 aa23.27■■□□□ 1.32
HDAC5-208ENST00000588419 CFAP43Q8NDM7 1665 aa23.23■■□□□ 1.31
HDAC5-208ENST00000588419 KDM4FA0A1W2PPD8 638 aa23.23■■□□□ 1.31
HDAC5-208ENST00000588419 P3H3Q8IVL6 736 aa23.2■■□□□ 1.3
HDAC5-208ENST00000588419 COL17A1Q9UMD9 1497 aaPredicted RBP23.19■■□□□ 1.3
HDAC5-208ENST00000588419 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
HDAC5-208ENST00000588419 KCNH8Q96L42 1107 aa23.18■■□□□ 1.3
HDAC5-208ENST00000588419 ADGRL1O94910 1474 aa23.16■■□□□ 1.3
HDAC5-208ENST00000588419 SAMD9Q5K651 1589 aa23.14■■□□□ 1.3
HDAC5-208ENST00000588419 CD109Q6YHK3 1445 aa23.13■■□□□ 1.29
HDAC5-208ENST00000588419 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
HDAC5-208ENST00000588419 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
HDAC5-208ENST00000588419 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
HDAC5-208ENST00000588419 RAPGEF6Q8TEU7 1601 aa23.11■■□□□ 1.29
HDAC5-208ENST00000588419 MAGI3Q5TCQ9 1506 aa23.08■■□□□ 1.29
HDAC5-208ENST00000588419 ATP10BO94823 1461 aa23.04■■□□□ 1.28
HDAC5-208ENST00000588419 EEA1Q15075 1411 aa23.03■■□□□ 1.28
HDAC5-208ENST00000588419 KIF21BO75037 1637 aa23.03■■□□□ 1.28
HDAC5-208ENST00000588419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
HDAC5-208ENST00000588419 HNRNPUL2Q1KMD3 747 aaKnown RBP23.01■■□□□ 1.27
HDAC5-208ENST00000588419 ABCA9Q8IUA7 1624 aa23■■□□□ 1.27
HDAC5-208ENST00000588419 FHOD3Q2V2M9 1422 aa22.99■■□□□ 1.27
HDAC5-208ENST00000588419 NUP153P49790 1475 aaKnown RBP22.92■■□□□ 1.26
HDAC5-208ENST00000588419 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
HDAC5-208ENST00000588419 EFCAB5A4FU69 1503 aa22.89■■□□□ 1.26
HDAC5-208ENST00000588419 ARAP3Q8WWN8 1544 aa22.89■■□□□ 1.26
HDAC5-208ENST00000588419 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.25
HDAC5-208ENST00000588419 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
HDAC5-208ENST00000588419 NEO1Q92859 1461 aa22.82■■□□□ 1.24
HDAC5-208ENST00000588419 CDK13Q14004 1512 aaKnown RBP22.79■■□□□ 1.24
HDAC5-208ENST00000588419 RAPGEF3O95398 923 aa22.79■■□□□ 1.24
HDAC5-208ENST00000588419 TTC37Q6PGP7 1564 aa22.79■■□□□ 1.24
HDAC5-208ENST00000588419 CFAP74Q9C0B2 1584 aa22.79■■□□□ 1.24
HDAC5-208ENST00000588419 PHLDB1Q86UU1 1377 aa22.77■■□□□ 1.24
HDAC5-208ENST00000588419 PLEKHD1A6NEE1 506 aa22.77■■□□□ 1.24
HDAC5-208ENST00000588419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.77■■□□□ 1.24
HDAC5-208ENST00000588419 RICTORQ6R327 1708 aa22.77■■□□□ 1.23
HDAC5-208ENST00000588419 UBTFP17480 764 aaKnown RBP22.76■■□□□ 1.23
HDAC5-208ENST00000588419 HECW1Q76N89 1606 aa22.74■■□□□ 1.23
HDAC5-208ENST00000588419 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
HDAC5-208ENST00000588419 ADAMTSL3P82987 1691 aa22.73■■□□□ 1.23
HDAC5-208ENST00000588419 BCORL1Q5H9F3 1711 aa22.72■■□□□ 1.23
HDAC5-208ENST00000588419 FANCAO15360 1455 aa22.72■■□□□ 1.23
HDAC5-208ENST00000588419 ARHGEF40Q8TER5 1519 aa22.71■■□□□ 1.23
HDAC5-208ENST00000588419 MADDQ8WXG6 1647 aa22.69■■□□□ 1.22
HDAC5-208ENST00000588419 ARID4BQ4LE39 1312 aaPredicted RBP22.69■■□□□ 1.22
HDAC5-208ENST00000588419 DENND4BO75064 1496 aaPredicted RBP22.68■■□□□ 1.22
HDAC5-208ENST00000588419 AKNAQ7Z591 1439 aa22.68■■□□□ 1.22
HDAC5-208ENST00000588419 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
HDAC5-208ENST00000588419 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
HDAC5-208ENST00000588419 RIMS1Q86UR5 1692 aaKnown RBP22.67■■□□□ 1.22
HDAC5-208ENST00000588419 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
HDAC5-208ENST00000588419 LRRIQ1Q96JM4 1722 aa22.65■■□□□ 1.22
HDAC5-208ENST00000588419 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
HDAC5-208ENST00000588419 PTPRMP28827 1452 aa22.64■■□□□ 1.21
HDAC5-208ENST00000588419 KIF14Q15058 1648 aa22.61■■□□□ 1.21
HDAC5-208ENST00000588419 ZFYVE16Q7Z3T8 1539 aa22.61■■□□□ 1.21
HDAC5-208ENST00000588419 ZMYM4Q5VZL5 1548 aa22.59■■□□□ 1.21
HDAC5-208ENST00000588419 ILDR1Q86SU0 546 aaPredicted RBP22.59■■□□□ 1.21
HDAC5-208ENST00000588419 SIGLEC1Q9BZZ2 1709 aa22.59■■□□□ 1.21
HDAC5-208ENST00000588419 FER1L4A9Z1Z3 1794 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms