RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 SHROOM2Q13796 1616 aa23.34■■□□□ 1.33
AC003043.1-201ENST00000588260 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
AC003043.1-201ENST00000588260 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
AC003043.1-201ENST00000588260 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
AC003043.1-201ENST00000588260 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
AC003043.1-201ENST00000588260 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
AC003043.1-201ENST00000588260 IQGAP2Q13576 1575 aa23.16■■□□□ 1.3
AC003043.1-201ENST00000588260 EEA1Q15075 1411 aa23.16■■□□□ 1.3
AC003043.1-201ENST00000588260 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
AC003043.1-201ENST00000588260 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
AC003043.1-201ENST00000588260 CTTNBP2Q8WZ74 1663 aa23.08■■□□□ 1.29
AC003043.1-201ENST00000588260 CARMIL2Q6F5E8 1435 aa23.07■■□□□ 1.28
AC003043.1-201ENST00000588260 FAM9AQ8IZU1 332 aaPredicted RBP23.04■■□□□ 1.28
AC003043.1-201ENST00000588260 UGGT2Q9NYU1 1516 aa23■■□□□ 1.27
AC003043.1-201ENST00000588260 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
AC003043.1-201ENST00000588260 TNIKQ9UKE5 1360 aa22.97■■□□□ 1.27
AC003043.1-201ENST00000588260 PTPRGP23470 1445 aa22.96■■□□□ 1.27
AC003043.1-201ENST00000588260 DISP1Q96F81 1524 aa22.95■■□□□ 1.26
AC003043.1-201ENST00000588260 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
AC003043.1-201ENST00000588260 KIAA0556O60303 1618 aa22.93■■□□□ 1.26
AC003043.1-201ENST00000588260 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
AC003043.1-201ENST00000588260 KIF21BO75037 1637 aa22.91■■□□□ 1.26
AC003043.1-201ENST00000588260 NPM1P06748 294 aaKnown RBP eCLIP22.9■■□□□ 1.26
AC003043.1-201ENST00000588260 ADCY10Q96PN6 1610 aa22.9■■□□□ 1.26
AC003043.1-201ENST00000588260 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.25
AC003043.1-201ENST00000588260 UACAQ9BZF9 1416 aa22.8■■□□□ 1.24
AC003043.1-201ENST00000588260 UHRF1BP1LA0JNW5 1464 aa22.78■■□□□ 1.24
AC003043.1-201ENST00000588260 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
AC003043.1-201ENST00000588260 ABCC2Q92887 1545 aa22.77■■□□□ 1.24
AC003043.1-201ENST00000588260 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
AC003043.1-201ENST00000588260 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
AC003043.1-201ENST00000588260 SAMD9Q5K651 1589 aa22.74■■□□□ 1.23
AC003043.1-201ENST00000588260 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
AC003043.1-201ENST00000588260 P3H3Q8IVL6 736 aa22.72■■□□□ 1.23
AC003043.1-201ENST00000588260 KIF13AQ9H1H9 1805 aa22.69■■□□□ 1.22
AC003043.1-201ENST00000588260 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
AC003043.1-201ENST00000588260 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
AC003043.1-201ENST00000588260 ABCA8O94911 1581 aa22.66■■□□□ 1.22
AC003043.1-201ENST00000588260 EFCAB5A4FU69 1503 aa22.66■■□□□ 1.22
AC003043.1-201ENST00000588260 KDM5BQ9UGL1 1544 aa22.66■■□□□ 1.22
AC003043.1-201ENST00000588260 ZCCHC11Q5TAX3 1644 aaKnown RBP22.64■■□□□ 1.22
AC003043.1-201ENST00000588260 FAM69CQ0P6D2 419 aa22.64■■□□□ 1.21
AC003043.1-201ENST00000588260 DIP2BQ9P265 1576 aa22.63■■□□□ 1.21
AC003043.1-201ENST00000588260 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
AC003043.1-201ENST00000588260 FHOD3Q2V2M9 1422 aa22.6■■□□□ 1.21
AC003043.1-201ENST00000588260 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
AC003043.1-201ENST00000588260 WDR7Q9Y4E6 1490 aa22.51■■□□□ 1.19
AC003043.1-201ENST00000588260 GLI2P10070 1586 aa22.5■■□□□ 1.19
AC003043.1-201ENST00000588260 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
AC003043.1-201ENST00000588260 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
AC003043.1-201ENST00000588260 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
AC003043.1-201ENST00000588260 EPRSP07814 1512 aaKnown RBP22.48■■□□□ 1.19
AC003043.1-201ENST00000588260 ATP10BO94823 1461 aa22.46■■□□□ 1.19
AC003043.1-201ENST00000588260 FMN1Q68DA7 1419 aa22.45■■□□□ 1.18
AC003043.1-201ENST00000588260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
AC003043.1-201ENST00000588260 NUP153P49790 1475 aaKnown RBP22.44■■□□□ 1.18
AC003043.1-201ENST00000588260 HNRNPUL2Q1KMD3 747 aaKnown RBP22.44■■□□□ 1.18
AC003043.1-201ENST00000588260 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
AC003043.1-201ENST00000588260 MAP3K4Q9Y6R4 1608 aa22.4■■□□□ 1.18
AC003043.1-201ENST00000588260 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
AC003043.1-201ENST00000588260 HECW1Q76N89 1606 aa22.36■■□□□ 1.17
AC003043.1-201ENST00000588260 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
AC003043.1-201ENST00000588260 CLIP1P30622 1438 aa22.36■■□□□ 1.17
AC003043.1-201ENST00000588260 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
AC003043.1-201ENST00000588260 PPRC1Q5VV67 1664 aaKnown RBP22.35■■□□□ 1.17
AC003043.1-201ENST00000588260 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
AC003043.1-201ENST00000588260 KDM6BO15054 1643 aa22.33■■□□□ 1.17
AC003043.1-201ENST00000588260 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
AC003043.1-201ENST00000588260 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
AC003043.1-201ENST00000588260 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
AC003043.1-201ENST00000588260 ABCA9Q8IUA7 1624 aa22.27■■□□□ 1.16
AC003043.1-201ENST00000588260 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
AC003043.1-201ENST00000588260 PCF11O94913 1555 aaKnown RBP22.25■■□□□ 1.15
AC003043.1-201ENST00000588260 CEP162Q5TB80 1403 aa22.23■■□□□ 1.15
AC003043.1-201ENST00000588260 CASKIN1Q8WXD9 1431 aa22.23■■□□□ 1.15
AC003043.1-201ENST00000588260 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
AC003043.1-201ENST00000588260 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
AC003043.1-201ENST00000588260 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
AC003043.1-201ENST00000588260 CCDC18Q5T9S5 1454 aa22.19■■□□□ 1.14
AC003043.1-201ENST00000588260 LRRIQ1Q96JM4 1722 aa22.19■■□□□ 1.14
AC003043.1-201ENST00000588260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.14■■□□□ 1.13
AC003043.1-201ENST00000588260 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
AC003043.1-201ENST00000588260 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
AC003043.1-201ENST00000588260 COL17A1Q9UMD9 1497 aaPredicted RBP22.11■■□□□ 1.13
AC003043.1-201ENST00000588260 KIF14Q15058 1648 aa22.11■■□□□ 1.13
AC003043.1-201ENST00000588260 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
AC003043.1-201ENST00000588260 NEO1Q92859 1461 aa22.09■■□□□ 1.13
AC003043.1-201ENST00000588260 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.12
AC003043.1-201ENST00000588260 ARAP3Q8WWN8 1544 aa22.06■■□□□ 1.12
AC003043.1-201ENST00000588260 MYO5CQ9NQX4 1742 aa22.05■■□□□ 1.12
AC003043.1-201ENST00000588260 FANCAO15360 1455 aa22.04■■□□□ 1.12
AC003043.1-201ENST00000588260 PLCH2O75038 1416 aa22.01■■□□□ 1.11
AC003043.1-201ENST00000588260 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
AC003043.1-201ENST00000588260 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
AC003043.1-201ENST00000588260 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
AC003043.1-201ENST00000588260 EFCAB2Q5VUJ9 269 aa21.95■■□□□ 1.1
AC003043.1-201ENST00000588260 ARHGAP5Q13017 1502 aa21.95■■□□□ 1.1
AC003043.1-201ENST00000588260 RAPGEF3O95398 923 aa21.94■■□□□ 1.1
AC003043.1-201ENST00000588260 DENND4BO75064 1496 aaPredicted RBP21.94■■□□□ 1.1
AC003043.1-201ENST00000588260 ADGRL1O94910 1474 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms