RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 ILDR1Q86SU0 546 aaPredicted RBP14.9□□□□□ -0.02
NEDD4L-218ENST00000587547 GRIN2BQ13224 1484 aa14.89□□□□□ -0.03
NEDD4L-218ENST00000587547 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
NEDD4L-218ENST00000587547 WDR97A6NE52 1622 aa14.89□□□□□ -0.03
NEDD4L-218ENST00000587547 ERCC6L2Q5T890 1561 aa14.88□□□□□ -0.03
NEDD4L-218ENST00000587547 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
NEDD4L-218ENST00000587547 CUX1P39880 1505 aa14.81□□□□□ -0.04
NEDD4L-218ENST00000587547 KIF13AQ9H1H9 1805 aa14.79□□□□□ -0.04
NEDD4L-218ENST00000587547 KDM4FA0A1W2PPD8 638 aa14.78□□□□□ -0.04
NEDD4L-218ENST00000587547 PBRM1Q86U86 1689 aa14.77□□□□□ -0.04
NEDD4L-218ENST00000587547 CEP170Q5SW79 1584 aa14.76□□□□□ -0.05
NEDD4L-218ENST00000587547 GRIN2AQ12879 1464 aa14.72□□□□□ -0.05
NEDD4L-218ENST00000587547 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
NEDD4L-218ENST00000587547 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
NEDD4L-218ENST00000587547 NUP160Q12769 1436 aa14.7□□□□□ -0.06
NEDD4L-218ENST00000587547 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
NEDD4L-218ENST00000587547 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
NEDD4L-218ENST00000587547 SHROOM2Q13796 1616 aa14.67□□□□□ -0.06
NEDD4L-218ENST00000587547 FAM69CQ0P6D2 419 aa14.67□□□□□ -0.06
NEDD4L-218ENST00000587547 ABCC10Q5T3U5 1492 aa14.65□□□□□ -0.06
NEDD4L-218ENST00000587547 ADAMTS12P58397 1594 aa14.64□□□□□ -0.07
NEDD4L-218ENST00000587547 KDM6BO15054 1643 aa14.61□□□□□ -0.07
NEDD4L-218ENST00000587547 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
NEDD4L-218ENST00000587547 PRG4Q92954 1404 aaPredicted RBP14.6□□□□□ -0.07
NEDD4L-218ENST00000587547 MAPKBP1O60336 1514 aa14.57□□□□□ -0.08
NEDD4L-218ENST00000587547 FHAD1B1AJZ9 1412 aa14.56□□□□□ -0.08
NEDD4L-218ENST00000587547 NPM1P06748 294 aaKnown RBP eCLIP14.52□□□□□ -0.09
NEDD4L-218ENST00000587547 JPH4Q96JJ6 628 aa14.52□□□□□ -0.09
NEDD4L-218ENST00000587547 ADCY10Q96PN6 1610 aa14.52□□□□□ -0.09
NEDD4L-218ENST00000587547 ADGRL1O94910 1474 aa14.5□□□□□ -0.09
NEDD4L-218ENST00000587547 TSPOAP1O95153 1857 aa14.5□□□□□ -0.09
NEDD4L-218ENST00000587547 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
NEDD4L-218ENST00000587547 HECW2Q9P2P5 1572 aa14.48□□□□□ -0.09
NEDD4L-218ENST00000587547 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
NEDD4L-218ENST00000587547 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.1
NEDD4L-218ENST00000587547 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
NEDD4L-218ENST00000587547 PPRC1Q5VV67 1664 aaKnown RBP14.37□□□□□ -0.11
NEDD4L-218ENST00000587547 COL17A1Q9UMD9 1497 aaPredicted RBP14.37□□□□□ -0.11
NEDD4L-218ENST00000587547 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
NEDD4L-218ENST00000587547 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
NEDD4L-218ENST00000587547 FBXO41Q8TF61 875 aa14.33□□□□□ -0.12
NEDD4L-218ENST00000587547 ASXL2Q76L83 1435 aa14.32□□□□□ -0.12
NEDD4L-218ENST00000587547 KIAA0586Q9BVV6 1533 aa14.3□□□□□ -0.12
NEDD4L-218ENST00000587547 GLI2P10070 1586 aa14.3□□□□□ -0.12
NEDD4L-218ENST00000587547 ABCC2Q92887 1545 aa14.29□□□□□ -0.12
NEDD4L-218ENST00000587547 PTPRGP23470 1445 aa14.28□□□□□ -0.12
NEDD4L-218ENST00000587547 TTBK1Q5TCY1 1321 aaPredicted RBP14.28□□□□□ -0.12
NEDD4L-218ENST00000587547 PLB1Q6P1J6 1458 aa14.26□□□□□ -0.13
NEDD4L-218ENST00000587547 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
NEDD4L-218ENST00000587547 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
NEDD4L-218ENST00000587547 EPRSP07814 1512 aaKnown RBP14.21□□□□□ -0.13
NEDD4L-218ENST00000587547 CUL7Q14999 1698 aa14.21□□□□□ -0.13
NEDD4L-218ENST00000587547 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.13
NEDD4L-218ENST00000587547 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
NEDD4L-218ENST00000587547 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
NEDD4L-218ENST00000587547 UHRF1BP1LA0JNW5 1464 aa14.18□□□□□ -0.14
NEDD4L-218ENST00000587547 IGF1RP08069 1367 aa14.17□□□□□ -0.14
NEDD4L-218ENST00000587547 LMTK3Q96Q04 1460 aa14.15□□□□□ -0.14
NEDD4L-218ENST00000587547 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
NEDD4L-218ENST00000587547 CARMIL2Q6F5E8 1435 aa14.15□□□□□ -0.14
NEDD4L-218ENST00000587547 UACAQ9BZF9 1416 aa14.15□□□□□ -0.14
NEDD4L-218ENST00000587547 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
NEDD4L-218ENST00000587547 KDM5BQ9UGL1 1544 aa14.14□□□□□ -0.15
NEDD4L-218ENST00000587547 KIF21BO75037 1637 aa14.1□□□□□ -0.15
NEDD4L-218ENST00000587547 ZCCHC11Q5TAX3 1644 aaKnown RBP14.09□□□□□ -0.15
NEDD4L-218ENST00000587547 DISP1Q96F81 1524 aa14.09□□□□□ -0.15
NEDD4L-218ENST00000587547 IQGAP2Q13576 1575 aa14.07□□□□□ -0.16
NEDD4L-218ENST00000587547 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
NEDD4L-218ENST00000587547 WDR7Q9Y4E6 1490 aa14.06□□□□□ -0.16
NEDD4L-218ENST00000587547 PTPRMP28827 1452 aa14.06□□□□□ -0.16
NEDD4L-218ENST00000587547 ILDR2Q71H61 639 aa14.05□□□□□ -0.16
NEDD4L-218ENST00000587547 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
NEDD4L-218ENST00000587547 MAGI3Q5TCQ9 1506 aa14.04□□□□□ -0.16
NEDD4L-218ENST00000587547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.16
NEDD4L-218ENST00000587547 CD109Q6YHK3 1445 aa14.03□□□□□ -0.16
NEDD4L-218ENST00000587547 PCF11O94913 1555 aaKnown RBP14.01□□□□□ -0.17
NEDD4L-218ENST00000587547 ADAMTSL3P82987 1691 aa14.01□□□□□ -0.17
NEDD4L-218ENST00000587547 SOCS7O14512 581 aa14□□□□□ -0.17
NEDD4L-218ENST00000587547 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
NEDD4L-218ENST00000587547 KCNH8Q96L42 1107 aa13.98□□□□□ -0.17
NEDD4L-218ENST00000587547 UGGT2Q9NYU1 1516 aa13.97□□□□□ -0.17
NEDD4L-218ENST00000587547 KIAA0556O60303 1618 aa13.97□□□□□ -0.17
NEDD4L-218ENST00000587547 DISP3Q9P2K9 1392 aa13.96□□□□□ -0.17
NEDD4L-218ENST00000587547 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
NEDD4L-218ENST00000587547 ARAP3Q8WWN8 1544 aa13.95□□□□□ -0.18
NEDD4L-218ENST00000587547 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
NEDD4L-218ENST00000587547 HSPA2P54652 639 aa13.93□□□□□ -0.18
NEDD4L-218ENST00000587547 CERKQ8TCT0 537 aa13.92□□□□□ -0.18
NEDD4L-218ENST00000587547 BCORL1Q5H9F3 1711 aa13.91□□□□□ -0.18
NEDD4L-218ENST00000587547 EEA1Q15075 1411 aa13.9□□□□□ -0.19
NEDD4L-218ENST00000587547 RAPGEF3O95398 923 aa13.89□□□□□ -0.19
NEDD4L-218ENST00000587547 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
NEDD4L-218ENST00000587547 ABCA8O94911 1581 aa13.88□□□□□ -0.19
NEDD4L-218ENST00000587547 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
NEDD4L-218ENST00000587547 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
NEDD4L-218ENST00000587547 RAPGEF2Q9Y4G8 1499 aa13.85□□□□□ -0.19
NEDD4L-218ENST00000587547 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
NEDD4L-218ENST00000587547 FRMPD1Q5SYB0 1578 aa13.84□□□□□ -0.19
NEDD4L-218ENST00000587547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
NEDD4L-218ENST00000587547 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms