RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
NEDD4L-218ENST00000587547 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
NEDD4L-218ENST00000587547 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
NEDD4L-218ENST00000587547 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
NEDD4L-218ENST00000587547 ABCC9O60706 1549 aa19.11■□□□□ 0.65
NEDD4L-218ENST00000587547 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
NEDD4L-218ENST00000587547 CCDC180Q9P1Z9 1646 aa18.47■□□□□ 0.55
NEDD4L-218ENST00000587547 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
NEDD4L-218ENST00000587547 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
NEDD4L-218ENST00000587547 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
NEDD4L-218ENST00000587547 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
NEDD4L-218ENST00000587547 NACADO15069 1562 aa17.62■□□□□ 0.41
NEDD4L-218ENST00000587547 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
NEDD4L-218ENST00000587547 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
NEDD4L-218ENST00000587547 BICRAQ9NZM4 1560 aa17.44■□□□□ 0.38
NEDD4L-218ENST00000587547 DNAJC5Q9H3Z4 198 aa17.32■□□□□ 0.36
NEDD4L-218ENST00000587547 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
NEDD4L-218ENST00000587547 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
NEDD4L-218ENST00000587547 MYO15BQ96JP2 1530 aa17.17■□□□□ 0.34
NEDD4L-218ENST00000587547 FOXD1Q16676 465 aa17.08■□□□□ 0.32
NEDD4L-218ENST00000587547 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
NEDD4L-218ENST00000587547 EIF4G1Q04637 1599 aaKnown RBP17.03■□□□□ 0.32
NEDD4L-218ENST00000587547 ADRA2BP18089 450 aa16.88■□□□□ 0.29
NEDD4L-218ENST00000587547 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
NEDD4L-218ENST00000587547 SCRIBQ14160 1630 aa16.87■□□□□ 0.29
NEDD4L-218ENST00000587547 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.28
NEDD4L-218ENST00000587547 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
NEDD4L-218ENST00000587547 CUX2O14529 1486 aa16.65■□□□□ 0.26
NEDD4L-218ENST00000587547 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
NEDD4L-218ENST00000587547 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
NEDD4L-218ENST00000587547 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
NEDD4L-218ENST00000587547 NESP48681 1621 aa16.27■□□□□ 0.2
NEDD4L-218ENST00000587547 PIAS4Q8N2W9 510 aaPredicted RBP16.22■□□□□ 0.19
NEDD4L-218ENST00000587547 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-218ENST00000587547 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
NEDD4L-218ENST00000587547 KCNA4P22459 653 aa16.18■□□□□ 0.18
NEDD4L-218ENST00000587547 HMGXB3Q12766 1538 aa16.11■□□□□ 0.17
NEDD4L-218ENST00000587547 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
NEDD4L-218ENST00000587547 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
NEDD4L-218ENST00000587547 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
NEDD4L-218ENST00000587547 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
NEDD4L-218ENST00000587547 BAZ1BQ9UIG0 1483 aaKnown RBP15.98■□□□□ 0.15
NEDD4L-218ENST00000587547 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
NEDD4L-218ENST00000587547 PDS5BQ9NTI5 1447 aa15.93■□□□□ 0.14
NEDD4L-218ENST00000587547 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
NEDD4L-218ENST00000587547 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
NEDD4L-218ENST00000587547 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.13
NEDD4L-218ENST00000587547 WDR62O43379 1518 aa15.83■□□□□ 0.12
NEDD4L-218ENST00000587547 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
NEDD4L-218ENST00000587547 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
NEDD4L-218ENST00000587547 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
NEDD4L-218ENST00000587547 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
NEDD4L-218ENST00000587547 RIMBP3CA6NJZ7 1639 aa15.68■□□□□ 0.1
NEDD4L-218ENST00000587547 RIMBP3BA6NNM3 1639 aa15.68■□□□□ 0.1
NEDD4L-218ENST00000587547 RIMBP3Q9UFD9 1639 aa15.68■□□□□ 0.1
NEDD4L-218ENST00000587547 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
NEDD4L-218ENST00000587547 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
NEDD4L-218ENST00000587547 FANCD2Q9BXW9 1451 aa15.61■□□□□ 0.09
NEDD4L-218ENST00000587547 ARHGEF11O15085 1522 aa15.58■□□□□ 0.09
NEDD4L-218ENST00000587547 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
NEDD4L-218ENST00000587547 MSH5O43196 834 aa15.5■□□□□ 0.07
NEDD4L-218ENST00000587547 TRHP20396 242 aaPredicted RBP15.5■□□□□ 0.07
NEDD4L-218ENST00000587547 CYB5RLQ6IPT4 315 aa15.5■□□□□ 0.07
NEDD4L-218ENST00000587547 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
NEDD4L-218ENST00000587547 WIZO95785 1651 aa15.48■□□□□ 0.07
NEDD4L-218ENST00000587547 CFTRP13569 1480 aa15.48■□□□□ 0.07
NEDD4L-218ENST00000587547 ZNF608Q9ULD9 1512 aaPredicted RBP15.45■□□□□ 0.06
NEDD4L-218ENST00000587547 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
NEDD4L-218ENST00000587547 ARAP1Q96P48 1450 aa15.42■□□□□ 0.06
NEDD4L-218ENST00000587547 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
NEDD4L-218ENST00000587547 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
NEDD4L-218ENST00000587547 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
NEDD4L-218ENST00000587547 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-218ENST00000587547 CHD1O14646 1710 aa15.27■□□□□ 0.04
NEDD4L-218ENST00000587547 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
NEDD4L-218ENST00000587547 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
NEDD4L-218ENST00000587547 TOPBP1Q92547 1522 aa15.25■□□□□ 0.03
NEDD4L-218ENST00000587547 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
NEDD4L-218ENST00000587547 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
NEDD4L-218ENST00000587547 FBLN2P98095 1184 aa15.22■□□□□ 0.03
NEDD4L-218ENST00000587547 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
NEDD4L-218ENST00000587547 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
NEDD4L-218ENST00000587547 TARBP1Q13395 1621 aaKnown RBP15.15■□□□□ 0.02
NEDD4L-218ENST00000587547 DNMBPQ6XZF7 1577 aa15.12■□□□□ 0.01
NEDD4L-218ENST00000587547 CLASP1Q7Z460 1538 aa15.11■□□□□ 0.01
NEDD4L-218ENST00000587547 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
NEDD4L-218ENST00000587547 CCDC88BA6NC98 1476 aa15.08■□□□□ 0.01
NEDD4L-218ENST00000587547 SUPT5HO00267 1087 aaKnown RBP15.08■□□□□ 0
NEDD4L-218ENST00000587547 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
NEDD4L-218ENST00000587547 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ -0
NEDD4L-218ENST00000587547 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
NEDD4L-218ENST00000587547 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ -0
NEDD4L-218ENST00000587547 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
NEDD4L-218ENST00000587547 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
NEDD4L-218ENST00000587547 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
NEDD4L-218ENST00000587547 SOGA1O94964 1423 aa14.96□□□□□ -0.01
NEDD4L-218ENST00000587547 MAGI1Q96QZ7 1491 aaPredicted RBP14.95□□□□□ -0.02
NEDD4L-218ENST00000587547 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
NEDD4L-218ENST00000587547 SYNJ2O15056 1496 aa14.92□□□□□ -0.02
NEDD4L-218ENST00000587547 ZBTB22O15209 634 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms